RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 JPH4Q96JJ6 628 aa21.83■■□□□ 1.08
PDE1C-206ENST00000396193 KIF3AQ9Y496 699 aa21.82■■□□□ 1.08
PDE1C-206ENST00000396193 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
PDE1C-206ENST00000396193 MCTP1Q6DN14 999 aa21.81■■□□□ 1.08
PDE1C-206ENST00000396193 GOLGA6L19H0YKK7 550 aa21.81■■□□□ 1.08
PDE1C-206ENST00000396193 CUX1P39880 1505 aa21.8■■□□□ 1.08
PDE1C-206ENST00000396193 CCDC34Q96HJ3 373 aa21.8■■□□□ 1.08
PDE1C-206ENST00000396193 API5Q9BZZ5 524 aaKnown RBP21.8■■□□□ 1.08
PDE1C-206ENST00000396193 EVC2Q86UK5 1308 aa21.79■■□□□ 1.08
PDE1C-206ENST00000396193 SF3A1Q15459 793 aaKnown RBP21.79■■□□□ 1.08
PDE1C-206ENST00000396193 RIPK4P57078 832 aa21.79■■□□□ 1.08
PDE1C-206ENST00000396193 BECN2A8MW95 431 aa21.79■■□□□ 1.08
PDE1C-206ENST00000396193 RRP9O43818 475 aaKnown RBP21.79■■□□□ 1.08
PDE1C-206ENST00000396193 ZNF592Q92610 1267 aa21.78■■□□□ 1.08
PDE1C-206ENST00000396193 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.08
PDE1C-206ENST00000396193 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
PDE1C-206ENST00000396193 NBPF8Q3BBV2 869 aa21.76■■□□□ 1.07
PDE1C-206ENST00000396193 CCDC39Q9UFE4 941 aa21.76■■□□□ 1.07
PDE1C-206ENST00000396193 INTS3Q68E01 1043 aaKnown RBP21.76■■□□□ 1.07
PDE1C-206ENST00000396193 H3BQV1 296 aa21.76■■□□□ 1.07
PDE1C-206ENST00000396193 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
PDE1C-206ENST00000396193 DIAPH3Q9NSV4 1193 aa21.75■■□□□ 1.07
PDE1C-206ENST00000396193 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
PDE1C-206ENST00000396193 GORABQ5T7V8 394 aa21.75■■□□□ 1.07
PDE1C-206ENST00000396193 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
PDE1C-206ENST00000396193 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
PDE1C-206ENST00000396193 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
PDE1C-206ENST00000396193 PDZRN3Q9UPQ7 1066 aa21.74■■□□□ 1.07
PDE1C-206ENST00000396193 CASKIN1Q8WXD9 1431 aa21.74■■□□□ 1.07
PDE1C-206ENST00000396193 GPS2Q13227 327 aa21.74■■□□□ 1.07
PDE1C-206ENST00000396193 PDE3AQ14432 1141 aa21.74■■□□□ 1.07
PDE1C-206ENST00000396193 TEX35Q5T0J7 233 aa21.73■■□□□ 1.07
PDE1C-206ENST00000396193 ANO2Q9NQ90 1003 aa21.73■■□□□ 1.07
PDE1C-206ENST00000396193 FAM184AQ8NB25 1140 aa21.72■■□□□ 1.07
PDE1C-206ENST00000396193 CCDC173Q0VFZ6 552 aa21.72■■□□□ 1.07
PDE1C-206ENST00000396193 AMPHP49418 695 aa21.72■■□□□ 1.07
PDE1C-206ENST00000396193 NOC3LQ8WTT2 800 aaKnown RBP21.72■■□□□ 1.07
PDE1C-206ENST00000396193 CHMP3Q9Y3E7 222 aa21.72■■□□□ 1.07
PDE1C-206ENST00000396193 PPP2R1AP30153 589 aa21.71■■□□□ 1.07
PDE1C-206ENST00000396193 CDC45O75419 566 aa21.71■■□□□ 1.07
PDE1C-206ENST00000396193 TPM3P06753 285 aa21.71■■□□□ 1.07
PDE1C-206ENST00000396193 RBM10P98175 930 aaKnown RBP21.7■■□□□ 1.06
PDE1C-206ENST00000396193 ANKRD50Q9ULJ7 1429 aa21.7■■□□□ 1.06
PDE1C-206ENST00000396193 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.06
PDE1C-206ENST00000396193 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
PDE1C-206ENST00000396193 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
PDE1C-206ENST00000396193 CCAR2Q8N163 923 aaKnown RBP21.69■■□□□ 1.06
PDE1C-206ENST00000396193 NPHP1O15259 732 aa21.69■■□□□ 1.06
PDE1C-206ENST00000396193 SETQ01105 290 aaPredicted RBP21.69■■□□□ 1.06
PDE1C-206ENST00000396193 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
PDE1C-206ENST00000396193 STAC3Q96MF2 364 aa21.69■■□□□ 1.06
PDE1C-206ENST00000396193 ZKSCAN1P17029 563 aaPredicted RBP21.68■■□□□ 1.06
PDE1C-206ENST00000396193 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
PDE1C-206ENST00000396193 ESPNB1AK53 854 aa21.68■■□□□ 1.06
PDE1C-206ENST00000396193 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
PDE1C-206ENST00000396193 HMGN5P82970 282 aaKnown RBP21.68■■□□□ 1.06
PDE1C-206ENST00000396193 RNF214Q8ND24 703 aa21.68■■□□□ 1.06
PDE1C-206ENST00000396193 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
PDE1C-206ENST00000396193 CAVIN1Q6NZI2 390 aaKnown RBP21.67■■□□□ 1.06
PDE1C-206ENST00000396193 COG3Q96JB2 828 aa21.67■■□□□ 1.06
PDE1C-206ENST00000396193 BCAR3O75815 825 aa21.67■■□□□ 1.06
PDE1C-206ENST00000396193 ROCK1Q13464 1354 aa21.67■■□□□ 1.06
PDE1C-206ENST00000396193 GRPEL1Q9HAV7 217 aa21.66■■□□□ 1.06
PDE1C-206ENST00000396193 NGDNQ8NEJ9 315 aaKnown RBP21.65■■□□□ 1.06
PDE1C-206ENST00000396193 CHMP4CQ96CF2 233 aa21.65■■□□□ 1.06
PDE1C-206ENST00000396193 SMC3Q9UQE7 1217 aa21.65■■□□□ 1.06
PDE1C-206ENST00000396193 GNAI1P63096 354 aa21.65■■□□□ 1.06
PDE1C-206ENST00000396193 IFT57Q9NWB7 429 aa21.65■■□□□ 1.06
PDE1C-206ENST00000396193 ZNF330Q9Y3S2 320 aaPredicted RBP21.64■■□□□ 1.06
PDE1C-206ENST00000396193 HFM1A2PYH4 1435 aa21.64■■□□□ 1.05
PDE1C-206ENST00000396193 LTV1Q96GA3 475 aaPredicted RBP21.64■■□□□ 1.05
PDE1C-206ENST00000396193 MINK1Q8N4C8 1332 aaPredicted RBP21.64■■□□□ 1.05
PDE1C-206ENST00000396193 VPS37CA5D8V6 355 aaPredicted RBP21.63■■□□□ 1.05
PDE1C-206ENST00000396193 PODXL2Q9NZ53 605 aa21.63■■□□□ 1.05
PDE1C-206ENST00000396193 BICD2Q8TD16 824 aa21.63■■□□□ 1.05
PDE1C-206ENST00000396193 CREBRFQ8IUR6 639 aa21.63■■□□□ 1.05
PDE1C-206ENST00000396193 MBD3O95983 291 aa21.62■■□□□ 1.05
PDE1C-206ENST00000396193 CCDC66A2RUB6 948 aa21.62■■□□□ 1.05
PDE1C-206ENST00000396193 TAF7LQ5H9L4 462 aa21.62■■□□□ 1.05
PDE1C-206ENST00000396193 NUTM2FA1L443 756 aa21.61■■□□□ 1.05
PDE1C-206ENST00000396193 MTHFSP49914 203 aa21.61■■□□□ 1.05
PDE1C-206ENST00000396193 HOMER1Q86YM7 354 aa21.61■■□□□ 1.05
PDE1C-206ENST00000396193 MCM4P33991 863 aa21.61■■□□□ 1.05
PDE1C-206ENST00000396193 CSB-PGBD3P0DP91 1061 aa21.6■■□□□ 1.05
PDE1C-206ENST00000396193 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
PDE1C-206ENST00000396193 ARGLU1Q9NWB6 273 aaPredicted RBP21.6■■□□□ 1.05
PDE1C-206ENST00000396193 PRPF40AO75400 957 aaKnown RBP21.59■■□□□ 1.05
PDE1C-206ENST00000396193 CFTRP13569 1480 aa21.59■■□□□ 1.05
PDE1C-206ENST00000396193 RABEP1Q15276 862 aa21.58■■□□□ 1.05
PDE1C-206ENST00000396193 SASS6Q6UVJ0 657 aa21.58■■□□□ 1.05
PDE1C-206ENST00000396193 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
PDE1C-206ENST00000396193 RASSF8Q8NHQ8 419 aa21.58■■□□□ 1.04
PDE1C-206ENST00000396193 UBE2Q2Q8WVN8 375 aa21.57■■□□□ 1.04
PDE1C-206ENST00000396193 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PDE1C-206ENST00000396193 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
PDE1C-206ENST00000396193 FKBP5Q13451 457 aaPredicted RBP21.56■■□□□ 1.04
PDE1C-206ENST00000396193 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
PDE1C-206ENST00000396193 PTPRGP23470 1445 aa21.56■■□□□ 1.04
PDE1C-206ENST00000396193 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
PDE1C-206ENST00000396193 GGNBP2Q9H3C7 697 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms