RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SBNO2Q9Y2G9 1366 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 GOLGA2Q08379 1002 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 MBD5Q9P267 1494 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 ABCC1P33527 1531 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 MLECQ14165 292 aa4.37□□□□□ -1.71
VPS13C-203ENST00000395896 FTSJ3Q8IY81 847 aaKnown RBP4.36□□□□□ -1.71
VPS13C-203ENST00000395896 RAPGEF3O95398 923 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 ABCA9Q8IUA7 1624 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 TET3O43151 1660 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 ANP32EQ9BTT0 268 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 CT47B1P0C2W7 299 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-203ENST00000395896 MAGI3Q5TCQ9 1506 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 HECW2Q9P2P5 1572 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 POLR1AO95602 1720 aaPredicted RBP4.36□□□□□ -1.71
VPS13C-203ENST00000395896 CLASP1Q7Z460 1538 aa4.36□□□□□ -1.71
VPS13C-203ENST00000395896 PTPRKQ15262 1439 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 E9PSI1 815 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 LRRIQ1Q96JM4 1722 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 PANK3Q9H999 370 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 IQGAP3Q86VI3 1631 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 CCDC61Q9Y6R9 512 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 TRAK1Q9UPV9 953 aa4.35□□□□□ -1.71
VPS13C-203ENST00000395896 CC2D1BQ5T0F9 858 aaKnown RBP4.35□□□□□ -1.71
VPS13C-203ENST00000395896 RTF1Q92541 710 aaKnown RBP4.35□□□□□ -1.71
VPS13C-203ENST00000395896 PRAG1Q86YV5 1406 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 NPC1L1Q9UHC9 1359 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 U2AF1L5P0DN76 240 aaPredicted RBP4.34□□□□□ -1.71
VPS13C-203ENST00000395896 U2AF1Q01081 240 aaKnown RBP eCLIP4.34□□□□□ -1.71
VPS13C-203ENST00000395896 SAMD9LQ8IVG5 1584 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 GPRASP1Q5JY77 1395 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 RCAN3Q9UKA8 241 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 TTC37Q6PGP7 1564 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 HMGB2P26583 209 aaKnown RBP4.34□□□□□ -1.71
VPS13C-203ENST00000395896 COG3Q96JB2 828 aa4.34□□□□□ -1.71
VPS13C-203ENST00000395896 SUPT16HQ9Y5B9 1047 aaKnown RBP4.34□□□□□ -1.71
VPS13C-203ENST00000395896 PPM1GO15355 546 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-203ENST00000395896 INSRP06213 1382 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 U2SURPO15042 1029 aaKnown RBP4.33□□□□□ -1.72
VPS13C-203ENST00000395896 NGDNQ8NEJ9 315 aaKnown RBP4.33□□□□□ -1.72
VPS13C-203ENST00000395896 PZPP20742 1482 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 UNC13BO14795 1591 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 STK26Q9P289 416 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 SPHKAPQ2M3C7 1700 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 BECN1Q14457 450 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 TRAPPC8Q9Y2L5 1435 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 TRPM2O94759 1503 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 KIF16BQ96L93 1317 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 CASC1Q6TDU7 716 aa4.33□□□□□ -1.72
VPS13C-203ENST00000395896 ZC3H13Q5T200 1668 aaKnown RBP4.33□□□□□ -1.72
VPS13C-203ENST00000395896 CFAP70Q5T0N1 1121 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 DDRGK1Q96HY6 314 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 C14orf93Q9H972 538 aaKnown RBP4.32□□□□□ -1.72
VPS13C-203ENST00000395896 ANKLE2Q86XL3 938 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 ARHGAP31Q2M1Z3 1444 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 TSPOAP1O95153 1857 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 IDI1Q13907 227 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 SALL2Q9Y467 1007 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-203ENST00000395896 AEBP2Q6ZN18 517 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-203ENST00000395896 HSP90AA1P07900 732 aaKnown RBP4.32□□□□□ -1.72
VPS13C-203ENST00000395896 ZFYVE16Q7Z3T8 1539 aa4.32□□□□□ -1.72
VPS13C-203ENST00000395896 ZMYM4Q5VZL5 1548 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 TXNDC2Q86VQ3 553 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 NBPF8Q3BBV2 869 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 LAMC1P11047 1609 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 NEURL4Q96JN8 1562 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 PNISRQ8TF01 805 aaKnown RBP4.31□□□□□ -1.72
VPS13C-203ENST00000395896 RUNDC1Q96C34 613 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 EFCAB6Q5THR3 1501 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 PMFBP1Q8TBY8 1022 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 KDM5AP29375 1690 aaKnown RBP4.31□□□□□ -1.72
VPS13C-203ENST00000395896 NCBP3Q53F19 620 aaKnown RBP4.31□□□□□ -1.72
VPS13C-203ENST00000395896 KIAA1210Q9ULL0 1709 aa4.31□□□□□ -1.72
VPS13C-203ENST00000395896 TCERG1O14776 1098 aaKnown RBP4.31□□□□□ -1.72
VPS13C-203ENST00000395896 PRDM15P57071 1507 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-203ENST00000395896 AMPHP49418 695 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 ZFYVE9O95405 1425 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 RWDD1Q9H446 243 aaPredicted RBP4.3□□□□□ -1.72
VPS13C-203ENST00000395896 DIAPH1O60610 1272 aaKnown RBP4.3□□□□□ -1.72
VPS13C-203ENST00000395896 STK31Q9BXU1 1019 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 MYOM2P54296 1465 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 HMMRO75330 724 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 ASXL1Q8IXJ9 1541 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 SAFB2Q14151 953 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS13C-203ENST00000395896 PTPRTO14522 1441 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 CEP152O94986 1710 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 CACNA1FO60840 1977 aa4.3□□□□□ -1.72
VPS13C-203ENST00000395896 SMG6Q86US8 1419 aaKnown RBP4.29□□□□□ -1.72
VPS13C-203ENST00000395896 GNAI1P63096 354 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 DMRT2Q9Y5R5 561 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 TNRQ92752 1358 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 NBPF1Q3BBV0 1214 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 WDR63Q8IWG1 891 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 KCNH5Q8NCM2 988 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 ABCC11Q96J66 1382 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 NEUROD2Q15784 382 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 IL27Q8NEV9 243 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 PDE3AQ14432 1141 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 ANKRD36BQ8N2N9 1353 aa4.29□□□□□ -1.72
VPS13C-203ENST00000395896 COL17A1Q9UMD9 1497 aaPredicted RBP4.29□□□□□ -1.72
VPS13C-203ENST00000395896 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms