RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ZFYVE9O95405 1425 aa21.56■■□□□ 1.04
PTPN20-206ENST00000395722 ZNF326Q5BKZ1 582 aaKnown RBP21.56■■□□□ 1.04
PTPN20-206ENST00000395722 MYO3AQ8NEV4 1616 aa21.55■■□□□ 1.04
PTPN20-206ENST00000395722 KIAA1210Q9ULL0 1709 aa21.52■■□□□ 1.04
PTPN20-206ENST00000395722 ADGRF5Q8IZF2 1346 aa21.51■■□□□ 1.03
PTPN20-206ENST00000395722 GPRASP1Q5JY77 1395 aa21.51■■□□□ 1.03
PTPN20-206ENST00000395722 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
PTPN20-206ENST00000395722 SETD1BQ9UPS6 1966 aaKnown RBP21.5■■□□□ 1.03
PTPN20-206ENST00000395722 PIK3C2GO75747 1445 aa21.5■■□□□ 1.03
PTPN20-206ENST00000395722 LAMC1P11047 1609 aa21.49■■□□□ 1.03
PTPN20-206ENST00000395722 ZNF142P52746 1687 aaPredicted RBP21.49■■□□□ 1.03
PTPN20-206ENST00000395722 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
PTPN20-206ENST00000395722 CEP170BQ9Y4F5 1589 aaPredicted RBP21.48■■□□□ 1.03
PTPN20-206ENST00000395722 VGFO15240 615 aaPredicted RBP21.48■■□□□ 1.03
PTPN20-206ENST00000395722 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
PTPN20-206ENST00000395722 TMEM2Q9UHN6 1383 aa21.46■■□□□ 1.03
PTPN20-206ENST00000395722 ARHGAP23Q9P227 1491 aa21.45■■□□□ 1.02
PTPN20-206ENST00000395722 SLIT1O75093 1534 aa21.45■■□□□ 1.02
PTPN20-206ENST00000395722 ROCK2O75116 1388 aaKnown RBP21.45■■□□□ 1.02
PTPN20-206ENST00000395722 KDM4FA0A1W2PPD8 638 aa21.44■■□□□ 1.02
PTPN20-206ENST00000395722 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
PTPN20-206ENST00000395722 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
PTPN20-206ENST00000395722 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
PTPN20-206ENST00000395722 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
PTPN20-206ENST00000395722 C14orf93Q9H972 538 aaKnown RBP21.41■■□□□ 1.02
PTPN20-206ENST00000395722 EIF4G2P78344 907 aaKnown RBP eCLIP21.4■■□□□ 1.02
PTPN20-206ENST00000395722 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
PTPN20-206ENST00000395722 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
PTPN20-206ENST00000395722 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.02
PTPN20-206ENST00000395722 THEMISQ8N1K5 641 aaPredicted RBP21.39■■□□□ 1.02
PTPN20-206ENST00000395722 USP47Q96K76 1375 aa21.39■■□□□ 1.01
PTPN20-206ENST00000395722 ADGRB1O14514 1584 aa21.39■■□□□ 1.01
PTPN20-206ENST00000395722 HSPA5P11021 654 aaKnown RBP21.38■■□□□ 1.01
PTPN20-206ENST00000395722 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
PTPN20-206ENST00000395722 IQGAP1P46940 1657 aa21.38■■□□□ 1.01
PTPN20-206ENST00000395722 NRXN3Q9Y4C0 1643 aa21.37■■□□□ 1.01
PTPN20-206ENST00000395722 ALKQ9UM73 1620 aa21.34■■□□□ 1.01
PTPN20-206ENST00000395722 SETD1AO15047 1707 aaKnown RBP21.34■■□□□ 1.01
PTPN20-206ENST00000395722 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
PTPN20-206ENST00000395722 SCAF11Q99590 1463 aaKnown RBP21.34■■□□□ 1.01
PTPN20-206ENST00000395722 LTKP29376 864 aa21.34■■□□□ 1.01
PTPN20-206ENST00000395722 PLEKHG1Q9ULL1 1385 aa21.33■■□□□ 1
PTPN20-206ENST00000395722 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
PTPN20-206ENST00000395722 EID1Q9Y6B2 187 aa21.3■■□□□ 1
PTPN20-206ENST00000395722 HIRIP3Q9BW71 556 aaPredicted RBP21.3■■□□□ 1
PTPN20-206ENST00000395722 MED14O60244 1454 aa21.28■■□□□ 1
PTPN20-206ENST00000395722 ADAMTS13Q76LX8 1427 aa21.28■■□□□ 1
PTPN20-206ENST00000395722 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
PTPN20-206ENST00000395722 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
PTPN20-206ENST00000395722 EIF3AQ14152 1382 aaKnown RBP21.24■□□□□ 0.99
PTPN20-206ENST00000395722 DIP2AQ14689 1571 aa21.24■□□□□ 0.99
PTPN20-206ENST00000395722 YTHDC2Q9H6S0 1430 aaKnown RBP21.23■□□□□ 0.99
PTPN20-206ENST00000395722 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
PTPN20-206ENST00000395722 POLR1AO95602 1720 aaPredicted RBP21.22■□□□□ 0.99
PTPN20-206ENST00000395722 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
PTPN20-206ENST00000395722 TESK2Q96S53 571 aa21.21■□□□□ 0.99
PTPN20-206ENST00000395722 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
PTPN20-206ENST00000395722 METP08581 1390 aa21.2■□□□□ 0.98
PTPN20-206ENST00000395722 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
PTPN20-206ENST00000395722 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
PTPN20-206ENST00000395722 DLC1Q96QB1 1528 aa21.2■□□□□ 0.98
PTPN20-206ENST00000395722 C11orf95C9JLR9 678 aaPredicted RBP21.19■□□□□ 0.98
PTPN20-206ENST00000395722 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
PTPN20-206ENST00000395722 KNDC1Q76NI1 1749 aa21.18■□□□□ 0.98
PTPN20-206ENST00000395722 SBNO2Q9Y2G9 1366 aa21.18■□□□□ 0.98
PTPN20-206ENST00000395722 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
PTPN20-206ENST00000395722 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
PTPN20-206ENST00000395722 TECPR2O15040 1411 aa21.17■□□□□ 0.98
PTPN20-206ENST00000395722 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
PTPN20-206ENST00000395722 CCDC7Q96M83 1385 aa21.17■□□□□ 0.98
PTPN20-206ENST00000395722 BCANQ96GW7 911 aa21.16■□□□□ 0.98
PTPN20-206ENST00000395722 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
PTPN20-206ENST00000395722 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
PTPN20-206ENST00000395722 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.97
PTPN20-206ENST00000395722 CPS1P31327 1500 aa21.14■□□□□ 0.97
PTPN20-206ENST00000395722 QRICH2Q9H0J4 1663 aa21.14■□□□□ 0.97
PTPN20-206ENST00000395722 PIK3R4Q99570 1358 aa21.13■□□□□ 0.97
PTPN20-206ENST00000395722 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
PTPN20-206ENST00000395722 STK26Q9P289 416 aa21.12■□□□□ 0.97
PTPN20-206ENST00000395722 PTPRUQ92729 1446 aa21.12■□□□□ 0.97
PTPN20-206ENST00000395722 SIRT1Q96EB6 747 aa21.12■□□□□ 0.97
PTPN20-206ENST00000395722 DISP3Q9P2K9 1392 aa21.11■□□□□ 0.97
PTPN20-206ENST00000395722 NCKAP5LQ9HCH0 1330 aa21.11■□□□□ 0.97
PTPN20-206ENST00000395722 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
PTPN20-206ENST00000395722 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
PTPN20-206ENST00000395722 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
PTPN20-206ENST00000395722 TMF1P82094 1093 aa21.08■□□□□ 0.97
PTPN20-206ENST00000395722 HSPA2P54652 639 aa21.07■□□□□ 0.96
PTPN20-206ENST00000395722 PRAM1Q96QH2 718 aa21.06■□□□□ 0.96
PTPN20-206ENST00000395722 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
PTPN20-206ENST00000395722 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
PTPN20-206ENST00000395722 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
PTPN20-206ENST00000395722 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
PTPN20-206ENST00000395722 ROBO2Q9HCK4 1378 aa21.05■□□□□ 0.96
PTPN20-206ENST00000395722 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
PTPN20-206ENST00000395722 PLEKHH1Q9ULM0 1364 aa21.04■□□□□ 0.96
PTPN20-206ENST00000395722 TULP4Q9NRJ4 1543 aa21.03■□□□□ 0.96
PTPN20-206ENST00000395722 POGKQ9P215 609 aa21.03■□□□□ 0.96
PTPN20-206ENST00000395722 AMOTL2Q9Y2J4 779 aa21.03■□□□□ 0.96
PTPN20-206ENST00000395722 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms