RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 TRIM6-TRIM34B2RNG4 842 aa7.91□□□□□ -1.14
A1CF-206ENST00000395489 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
A1CF-206ENST00000395489 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.91□□□□□ -1.14
A1CF-206ENST00000395489 GOLGA6L10A0A0M3HER8 536 aa7.91□□□□□ -1.14
A1CF-206ENST00000395489 CAVIN2O95810 425 aa7.91□□□□□ -1.14
A1CF-206ENST00000395489 R3HCC1Q9Y3T6 440 aaKnown RBP7.91□□□□□ -1.14
A1CF-206ENST00000395489 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
A1CF-206ENST00000395489 KRT222Q8N1A0 295 aa7.9□□□□□ -1.14
A1CF-206ENST00000395489 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
A1CF-206ENST00000395489 RSPH4AQ5TD94 716 aa7.9□□□□□ -1.14
A1CF-206ENST00000395489 PRPF40AO75400 957 aaKnown RBP7.9□□□□□ -1.14
A1CF-206ENST00000395489 PLEKHG5O94827 1062 aa7.9□□□□□ -1.15
A1CF-206ENST00000395489 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.15
A1CF-206ENST00000395489 NOC3LQ8WTT2 800 aaKnown RBP7.9□□□□□ -1.15
A1CF-206ENST00000395489 SMG6Q86US8 1419 aaKnown RBP7.9□□□□□ -1.15
A1CF-206ENST00000395489 RGS3P49796 1198 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 NEXNQ0ZGT2 675 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 STK31Q9BXU1 1019 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 CCDC112Q8NEF3 446 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 MICALCLQ6ZW33 695 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 GBP3Q9H0R5 595 aa7.89□□□□□ -1.15
A1CF-206ENST00000395489 DHX29Q7Z478 1369 aaKnown RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 IPO8O15397 1037 aaKnown RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 RRP12Q5JTH9 1297 aaKnown RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 FMNL3Q8IVF7 1028 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 NEMFO60524 1076 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 NAT10Q9H0A0 1025 aaKnown RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 PAXBP1Q9Y5B6 917 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 POTEB2H3BUK9 544 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 A0A1B0GUA9 196 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 IQCEQ6IPM2 695 aa7.88□□□□□ -1.15
A1CF-206ENST00000395489 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 ZNF526Q8TF50 670 aaPredicted RBP7.88□□□□□ -1.15
A1CF-206ENST00000395489 TRAK2O60296 914 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 AEBP1Q8IUX7 1158 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 MTUS2Q5JR59 1369 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 BACH2Q9BYV9 841 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 TUBBP07437 444 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 DMTNQ08495 405 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 ANKRD20A12PQ8NF67 263 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 YY1AP1Q9H869 796 aa7.87□□□□□ -1.15
A1CF-206ENST00000395489 OS9Q13438 667 aaPredicted RBP7.87□□□□□ -1.15
A1CF-206ENST00000395489 RRP1P56182 461 aaKnown RBP7.87□□□□□ -1.15
A1CF-206ENST00000395489 ZBTB7CA1YPR0 619 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 MCM2P49736 904 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 OFD1O75665 1012 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 RUFY1Q96T51 708 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 CNTLNQ9NXG0 1405 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 KIF15Q9NS87 1388 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 CCDC38Q502W7 563 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
A1CF-206ENST00000395489 RPAINQ86UA6 219 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 NF2P35240 595 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 OGFRQ9NZT2 677 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 AKAP17AQ02040 695 aaKnown RBP7.86□□□□□ -1.15
A1CF-206ENST00000395489 TERF2IPQ9NYB0 399 aa7.86□□□□□ -1.15
A1CF-206ENST00000395489 JAKMIP3Q5VZ66 844 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 CFAP53Q96M91 514 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 ERCC3P19447 782 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 SH2D4BQ5SQS7 431 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 CCDC50Q8IVM0 306 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 CT47A1Q5JQC4 288 aaPredicted RBP7.85□□□□□ -1.15
A1CF-206ENST00000395489 A0A1B0GUL7 405 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 KCNJ4P48050 445 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 ANKRD18BA2A2Z9 1011 aa7.85□□□□□ -1.15
A1CF-206ENST00000395489 CWC22Q9HCG8 908 aaKnown RBP7.85□□□□□ -1.15
A1CF-206ENST00000395489 REC8O95072 547 aa7.84□□□□□ -1.15
A1CF-206ENST00000395489 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
A1CF-206ENST00000395489 BMS1Q14692 1282 aaKnown RBP7.84□□□□□ -1.15
A1CF-206ENST00000395489 RNF168Q8IYW5 571 aaPredicted RBP7.84□□□□□ -1.15
A1CF-206ENST00000395489 SEPT14Q6ZU15 432 aa7.84□□□□□ -1.15
A1CF-206ENST00000395489 PPM1EQ8WY54 764 aa7.84□□□□□ -1.15
A1CF-206ENST00000395489 FILIP1Q7Z7B0 1213 aa7.84□□□□□ -1.15
A1CF-206ENST00000395489 WDR66Q8TBY9 1149 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 ZMYM3Q14202 1370 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 GOLIM4O00461 696 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 MAP9Q49MG5 647 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 CHMP4AQ9BY43 222 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 FYB1O15117 783 aa7.83□□□□□ -1.16
A1CF-206ENST00000395489 PLEKHH1Q9ULM0 1364 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 SHTN1A0MZ66 631 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 NLRP13Q86W25 1043 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 SMARCA2P51531 1590 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 GPATCH11Q8N954 259 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 IFT57Q9NWB7 429 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 EZRP15311 586 aaKnown RBP7.82□□□□□ -1.16
A1CF-206ENST00000395489 DNAAF4Q8WXU2 420 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 GEMIN8Q9NWZ8 242 aaKnown RBP7.82□□□□□ -1.16
A1CF-206ENST00000395489 CCDC7Q96M83 1385 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 MSH5O43196 834 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 LRCH2Q5VUJ6 765 aa7.82□□□□□ -1.16
A1CF-206ENST00000395489 SRRTQ9BXP5 876 aaKnown RBP7.82□□□□□ -1.16
A1CF-206ENST00000395489 NPM1P06748 294 aaKnown RBP eCLIP7.82□□□□□ -1.16
A1CF-206ENST00000395489 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
A1CF-206ENST00000395489 KIF3CO14782 793 aa7.81□□□□□ -1.16
A1CF-206ENST00000395489 ZHX1Q9UKY1 873 aaPredicted RBP7.81□□□□□ -1.16
A1CF-206ENST00000395489 ATP6V1AP38606 617 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms