RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RBM19Q9Y4C8 960 aaKnown RBP20.99■□□□□ 0.95
CPSF7-202ENST00000394888 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
CPSF7-202ENST00000394888 CNGB1Q14028 1251 aaPredicted RBP20.98■□□□□ 0.95
CPSF7-202ENST00000394888 CFAP65Q6ZU64 1925 aaKnown RBP20.97■□□□□ 0.95
CPSF7-202ENST00000394888 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
CPSF7-202ENST00000394888 SENP3-EIF4A1A0A087X0R7 540 aa20.97■□□□□ 0.95
CPSF7-202ENST00000394888 ADGRB1O14514 1584 aa20.96■□□□□ 0.95
CPSF7-202ENST00000394888 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
CPSF7-202ENST00000394888 ERVK-7P63135 1459 aa20.96■□□□□ 0.95
CPSF7-202ENST00000394888 INSRP06213 1382 aa20.96■□□□□ 0.95
CPSF7-202ENST00000394888 DIP2CQ9Y2E4 1556 aa20.95■□□□□ 0.95
CPSF7-202ENST00000394888 ABCC3O15438 1527 aa20.94■□□□□ 0.94
CPSF7-202ENST00000394888 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
CPSF7-202ENST00000394888 NPATQ14207 1427 aa20.93■□□□□ 0.94
CPSF7-202ENST00000394888 PANK3Q9H999 370 aa20.93■□□□□ 0.94
CPSF7-202ENST00000394888 PPP4R2Q9NY27 417 aa20.93■□□□□ 0.94
CPSF7-202ENST00000394888 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
CPSF7-202ENST00000394888 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
CPSF7-202ENST00000394888 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
CPSF7-202ENST00000394888 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
CPSF7-202ENST00000394888 KIF3BO15066 747 aa20.89■□□□□ 0.93
CPSF7-202ENST00000394888 ADGRF5Q8IZF2 1346 aa20.89■□□□□ 0.93
CPSF7-202ENST00000394888 SHPRHQ149N8 1683 aa20.89■□□□□ 0.93
CPSF7-202ENST00000394888 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.93
CPSF7-202ENST00000394888 ARHGEF28Q8N1W1 1705 aaKnown RBP20.88■□□□□ 0.93
CPSF7-202ENST00000394888 ASXL1Q8IXJ9 1541 aa20.88■□□□□ 0.93
CPSF7-202ENST00000394888 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
CPSF7-202ENST00000394888 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
CPSF7-202ENST00000394888 MSH5O43196 834 aa20.86■□□□□ 0.93
CPSF7-202ENST00000394888 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
CPSF7-202ENST00000394888 NEXMIFQ5QGS0 1516 aa20.85■□□□□ 0.93
CPSF7-202ENST00000394888 TMF1P82094 1093 aa20.84■□□□□ 0.93
CPSF7-202ENST00000394888 KANK1Q14678 1352 aa20.83■□□□□ 0.93
CPSF7-202ENST00000394888 NOS1P29475 1434 aa20.83■□□□□ 0.93
CPSF7-202ENST00000394888 STAC3Q96MF2 364 aa20.83■□□□□ 0.92
CPSF7-202ENST00000394888 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CPSF7-202ENST00000394888 NEO1Q92859 1461 aa20.82■□□□□ 0.92
CPSF7-202ENST00000394888 USP32Q8NFA0 1604 aa20.81■□□□□ 0.92
CPSF7-202ENST00000394888 NPC1L1Q9UHC9 1359 aa20.8■□□□□ 0.92
CPSF7-202ENST00000394888 GLI2P10070 1586 aa20.8■□□□□ 0.92
CPSF7-202ENST00000394888 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
CPSF7-202ENST00000394888 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
CPSF7-202ENST00000394888 SBNO2Q9Y2G9 1366 aa20.78■□□□□ 0.92
CPSF7-202ENST00000394888 CDCA7LQ96GN5 454 aa20.77■□□□□ 0.92
CPSF7-202ENST00000394888 ZNF521Q96K83 1311 aa20.77■□□□□ 0.91
CPSF7-202ENST00000394888 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
CPSF7-202ENST00000394888 PLEKHH1Q9ULM0 1364 aa20.76■□□□□ 0.91
CPSF7-202ENST00000394888 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
CPSF7-202ENST00000394888 PPP2R1AP30153 589 aa20.75■□□□□ 0.91
CPSF7-202ENST00000394888 CARD14Q9BXL6 1004 aa20.75■□□□□ 0.91
CPSF7-202ENST00000394888 TULP4Q9NRJ4 1543 aa20.74■□□□□ 0.91
CPSF7-202ENST00000394888 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
CPSF7-202ENST00000394888 YEATS2Q9ULM3 1422 aa20.71■□□□□ 0.91
CPSF7-202ENST00000394888 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
CPSF7-202ENST00000394888 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
CPSF7-202ENST00000394888 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
CPSF7-202ENST00000394888 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
CPSF7-202ENST00000394888 DIP2BQ9P265 1576 aa20.69■□□□□ 0.9
CPSF7-202ENST00000394888 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
CPSF7-202ENST00000394888 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
CPSF7-202ENST00000394888 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
CPSF7-202ENST00000394888 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
CPSF7-202ENST00000394888 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
CPSF7-202ENST00000394888 RAPGEF3O95398 923 aa20.66■□□□□ 0.9
CPSF7-202ENST00000394888 PDE3BQ13370 1112 aa20.66■□□□□ 0.9
CPSF7-202ENST00000394888 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
CPSF7-202ENST00000394888 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
CPSF7-202ENST00000394888 RCAN3Q9UKA8 241 aa20.63■□□□□ 0.89
CPSF7-202ENST00000394888 ANKRD26Q9UPS8 1709 aa20.62■□□□□ 0.89
CPSF7-202ENST00000394888 REREQ9P2R6 1566 aa20.62■□□□□ 0.89
CPSF7-202ENST00000394888 EXOC6Q8TAG9 804 aa20.62■□□□□ 0.89
CPSF7-202ENST00000394888 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
CPSF7-202ENST00000394888 IQSEC2Q5JU85 1478 aa20.61■□□□□ 0.89
CPSF7-202ENST00000394888 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
CPSF7-202ENST00000394888 PTPRMP28827 1452 aa20.59■□□□□ 0.89
CPSF7-202ENST00000394888 DUSP27Q5VZP5 1158 aa20.59■□□□□ 0.89
CPSF7-202ENST00000394888 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
CPSF7-202ENST00000394888 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
CPSF7-202ENST00000394888 TSPOAP1O95153 1857 aa20.57■□□□□ 0.88
CPSF7-202ENST00000394888 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
CPSF7-202ENST00000394888 KIF13AQ9H1H9 1805 aa20.57■□□□□ 0.88
CPSF7-202ENST00000394888 CDCA8Q53HL2 280 aa20.56■□□□□ 0.88
CPSF7-202ENST00000394888 GGT6Q6P531 493 aa20.55■□□□□ 0.88
CPSF7-202ENST00000394888 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
CPSF7-202ENST00000394888 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
CPSF7-202ENST00000394888 NRXN3Q9Y4C0 1643 aa20.54■□□□□ 0.88
CPSF7-202ENST00000394888 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
CPSF7-202ENST00000394888 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
CPSF7-202ENST00000394888 PLIN1O60240 522 aa20.53■□□□□ 0.88
CPSF7-202ENST00000394888 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
CPSF7-202ENST00000394888 TMEM132EQ6IEE7 984 aa20.53■□□□□ 0.88
CPSF7-202ENST00000394888 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
CPSF7-202ENST00000394888 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
CPSF7-202ENST00000394888 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
CPSF7-202ENST00000394888 NLRP1Q9C000 1473 aa20.52■□□□□ 0.88
CPSF7-202ENST00000394888 MYT1LQ9UL68 1186 aa20.52■□□□□ 0.88
CPSF7-202ENST00000394888 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPSF7-202ENST00000394888 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
CPSF7-202ENST00000394888 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
CPSF7-202ENST00000394888 AGLP35573 1532 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms