RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
SSH2-203ENST00000394848 SETD1BQ9UPS6 1966 aaKnown RBP17.58■□□□□ 0.4
SSH2-203ENST00000394848 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.4
SSH2-203ENST00000394848 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
SSH2-203ENST00000394848 CHGAP10645 457 aaKnown RBP17.56■□□□□ 0.4
SSH2-203ENST00000394848 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
SSH2-203ENST00000394848 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
SSH2-203ENST00000394848 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
SSH2-203ENST00000394848 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
SSH2-203ENST00000394848 NEURL4Q96JN8 1562 aa17.54■□□□□ 0.4
SSH2-203ENST00000394848 THEMISQ8N1K5 641 aaPredicted RBP17.53■□□□□ 0.4
SSH2-203ENST00000394848 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
SSH2-203ENST00000394848 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
SSH2-203ENST00000394848 CEP170BQ9Y4F5 1589 aaPredicted RBP17.52■□□□□ 0.4
SSH2-203ENST00000394848 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
SSH2-203ENST00000394848 ANP32CO43423 234 aa17.52■□□□□ 0.4
SSH2-203ENST00000394848 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.39
SSH2-203ENST00000394848 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
SSH2-203ENST00000394848 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
SSH2-203ENST00000394848 GPRASP1Q5JY77 1395 aa17.5■□□□□ 0.39
SSH2-203ENST00000394848 TRPM1Q7Z4N2 1603 aa17.49■□□□□ 0.39
SSH2-203ENST00000394848 ZNF142P52746 1687 aaPredicted RBP17.49■□□□□ 0.39
SSH2-203ENST00000394848 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
SSH2-203ENST00000394848 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
SSH2-203ENST00000394848 KIF1BO60333 1816 aa17.48■□□□□ 0.39
SSH2-203ENST00000394848 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
SSH2-203ENST00000394848 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
SSH2-203ENST00000394848 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
SSH2-203ENST00000394848 ARHGAP23Q9P227 1491 aa17.45■□□□□ 0.38
SSH2-203ENST00000394848 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
SSH2-203ENST00000394848 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSH2-203ENST00000394848 SLIT1O75093 1534 aa17.45■□□□□ 0.38
SSH2-203ENST00000394848 RIMS2Q9UQ26 1411 aa17.44■□□□□ 0.38
SSH2-203ENST00000394848 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
SSH2-203ENST00000394848 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
SSH2-203ENST00000394848 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
SSH2-203ENST00000394848 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
SSH2-203ENST00000394848 LTKP29376 864 aa17.43■□□□□ 0.38
SSH2-203ENST00000394848 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
SSH2-203ENST00000394848 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
SSH2-203ENST00000394848 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
SSH2-203ENST00000394848 CCER2I3L3R5 266 aa17.41■□□□□ 0.38
SSH2-203ENST00000394848 HSPA2P54652 639 aa17.41■□□□□ 0.38
SSH2-203ENST00000394848 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
SSH2-203ENST00000394848 MYOM2P54296 1465 aa17.41■□□□□ 0.38
SSH2-203ENST00000394848 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
SSH2-203ENST00000394848 LAMC1P11047 1609 aa17.4■□□□□ 0.38
SSH2-203ENST00000394848 MYO5BQ9ULV0 1848 aa17.4■□□□□ 0.38
SSH2-203ENST00000394848 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
SSH2-203ENST00000394848 TESK2Q96S53 571 aa17.38■□□□□ 0.37
SSH2-203ENST00000394848 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
SSH2-203ENST00000394848 NRXN1Q9ULB1 1477 aa17.37■□□□□ 0.37
SSH2-203ENST00000394848 PPLO60437 1756 aa17.36■□□□□ 0.37
SSH2-203ENST00000394848 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
SSH2-203ENST00000394848 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
SSH2-203ENST00000394848 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
SSH2-203ENST00000394848 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
SSH2-203ENST00000394848 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
SSH2-203ENST00000394848 TMF1P82094 1093 aa17.34■□□□□ 0.37
SSH2-203ENST00000394848 MED14O60244 1454 aa17.34■□□□□ 0.37
SSH2-203ENST00000394848 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.37
SSH2-203ENST00000394848 PRKRIP1Q9H875 184 aaPredicted RBP17.32■□□□□ 0.36
SSH2-203ENST00000394848 KIAA1210Q9ULL0 1709 aa17.31■□□□□ 0.36
SSH2-203ENST00000394848 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
SSH2-203ENST00000394848 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
SSH2-203ENST00000394848 BCANQ96GW7 911 aa17.3■□□□□ 0.36
SSH2-203ENST00000394848 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
SSH2-203ENST00000394848 DISP3Q9P2K9 1392 aa17.29■□□□□ 0.36
SSH2-203ENST00000394848 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
SSH2-203ENST00000394848 ADAMTS13Q76LX8 1427 aa17.29■□□□□ 0.36
SSH2-203ENST00000394848 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
SSH2-203ENST00000394848 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.35
SSH2-203ENST00000394848 IQGAP1P46940 1657 aa17.26■□□□□ 0.35
SSH2-203ENST00000394848 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
SSH2-203ENST00000394848 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
SSH2-203ENST00000394848 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
SSH2-203ENST00000394848 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SSH2-203ENST00000394848 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
SSH2-203ENST00000394848 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
SSH2-203ENST00000394848 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
SSH2-203ENST00000394848 METP08581 1390 aa17.23■□□□□ 0.35
SSH2-203ENST00000394848 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
SSH2-203ENST00000394848 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
SSH2-203ENST00000394848 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
SSH2-203ENST00000394848 ADGRB1O14514 1584 aa17.21■□□□□ 0.35
SSH2-203ENST00000394848 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
SSH2-203ENST00000394848 PANK3Q9H999 370 aa17.2■□□□□ 0.34
SSH2-203ENST00000394848 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
SSH2-203ENST00000394848 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
SSH2-203ENST00000394848 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
SSH2-203ENST00000394848 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
SSH2-203ENST00000394848 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
SSH2-203ENST00000394848 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
SSH2-203ENST00000394848 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
SSH2-203ENST00000394848 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
SSH2-203ENST00000394848 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
SSH2-203ENST00000394848 RALBP1Q15311 655 aa17.16■□□□□ 0.34
SSH2-203ENST00000394848 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
SSH2-203ENST00000394848 KCNA6P17658 529 aa17.15■□□□□ 0.34
SSH2-203ENST00000394848 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms