RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
SLC28A1-203ENST00000394573 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
SLC28A1-203ENST00000394573 MLECQ14165 292 aa15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 HS1BP3Q53T59 392 aa15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 DNAJC2Q99543 621 aaKnown RBP15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 PTMAP06454 111 aaKnown RBP15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 RALBP1Q15311 655 aa15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 DUSP27Q5VZP5 1158 aa15.59■□□□□ 0.09
SLC28A1-203ENST00000394573 ERICH4A6NGS2 130 aa15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 CAPN2P17655 700 aa15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 SSFA2P28290 1259 aa15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 COG6Q9Y2V7 657 aa15.58■□□□□ 0.09
SLC28A1-203ENST00000394573 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
SLC28A1-203ENST00000394573 RNF214Q8ND24 703 aa15.58■□□□□ 0.08
SLC28A1-203ENST00000394573 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
SLC28A1-203ENST00000394573 HAP1P54257 671 aaPredicted RBP15.58■□□□□ 0.08
SLC28A1-203ENST00000394573 PDLIM2Q96JY6 352 aa15.58■□□□□ 0.08
SLC28A1-203ENST00000394573 PANK1Q8TE04 598 aa15.57■□□□□ 0.08
SLC28A1-203ENST00000394573 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
SLC28A1-203ENST00000394573 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
SLC28A1-203ENST00000394573 KIAA2012Q0VF49 1180 aa15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 RAB3GAP1Q15042 981 aa15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 CNPY4Q8N129 248 aa15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 ZSCAN23Q3MJ62 389 aa15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SLC28A1-203ENST00000394573 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
SLC28A1-203ENST00000394573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
SLC28A1-203ENST00000394573 DDIT3P35638 169 aa15.54■□□□□ 0.08
SLC28A1-203ENST00000394573 CCDC39Q9UFE4 941 aa15.54■□□□□ 0.08
SLC28A1-203ENST00000394573 HDAC5Q9UQL6 1122 aa15.54■□□□□ 0.08
SLC28A1-203ENST00000394573 POLR1AO95602 1720 aaPredicted RBP15.53■□□□□ 0.08
SLC28A1-203ENST00000394573 SOX12O15370 315 aa15.53■□□□□ 0.08
SLC28A1-203ENST00000394573 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
SLC28A1-203ENST00000394573 TIGD1Q96MW7 591 aa15.53■□□□□ 0.08
SLC28A1-203ENST00000394573 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.08
SLC28A1-203ENST00000394573 KLHL40Q2TBA0 621 aa15.52■□□□□ 0.08
SLC28A1-203ENST00000394573 MCTP1Q6DN14 999 aa15.52■□□□□ 0.08
SLC28A1-203ENST00000394573 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.08
SLC28A1-203ENST00000394573 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.08
SLC28A1-203ENST00000394573 GOLGA6L22H0YM25 854 aa15.52■□□□□ 0.07
SLC28A1-203ENST00000394573 APPP05067 770 aa15.52■□□□□ 0.07
SLC28A1-203ENST00000394573 EIF3AQ14152 1382 aaKnown RBP15.51■□□□□ 0.07
SLC28A1-203ENST00000394573 RTEL1-TNFRSF6BF6WH68 1400 aa15.5■□□□□ 0.07
SLC28A1-203ENST00000394573 MCM5P33992 734 aa15.5■□□□□ 0.07
SLC28A1-203ENST00000394573 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
SLC28A1-203ENST00000394573 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
SLC28A1-203ENST00000394573 TMX1Q9H3N1 280 aa15.5■□□□□ 0.07
SLC28A1-203ENST00000394573 MIA2Q96PC5 1412 aa15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 SLFN14P0C7P3 912 aa15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 VGFO15240 615 aaPredicted RBP15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 CD2BP2O95400 341 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
SLC28A1-203ENST00000394573 BAG4O95429 457 aaKnown RBP15.48■□□□□ 0.07
SLC28A1-203ENST00000394573 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
SLC28A1-203ENST00000394573 ZNF445P59923 1031 aa15.48■□□□□ 0.07
SLC28A1-203ENST00000394573 HMGN5P82970 282 aaKnown RBP15.48■□□□□ 0.07
SLC28A1-203ENST00000394573 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 SLC20A2Q08357 652 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 TEX14Q8IWB6 1497 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 CCDC66A2RUB6 948 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 CHAMP1Q96JM3 812 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 SYCE3A1L190 88 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 GTF2F1P35269 517 aaKnown RBP eCLIP15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 TTC12Q9H892 705 aaPredicted RBP15.47■□□□□ 0.07
SLC28A1-203ENST00000394573 SMARCA4P51532 1647 aa15.46■□□□□ 0.07
SLC28A1-203ENST00000394573 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
SLC28A1-203ENST00000394573 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
SLC28A1-203ENST00000394573 KDM6BO15054 1643 aa15.45■□□□□ 0.06
SLC28A1-203ENST00000394573 CUX1P39880 1505 aa15.45■□□□□ 0.06
SLC28A1-203ENST00000394573 CCDC146Q8IYE0 955 aa15.45■□□□□ 0.06
SLC28A1-203ENST00000394573 NCOA3Q9Y6Q9 1424 aa15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 CARD11Q9BXL7 1154 aa15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 OGFRQ9NZT2 677 aa15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 RBM25P49756 843 aaKnown RBP15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
SLC28A1-203ENST00000394573 ZMYM4Q5VZL5 1548 aa15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 PTMSP20962 102 aa15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 TNNT3P45378 269 aaPredicted RBP15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 PSEN1P49768 467 aa15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 IBTKQ9P2D0 1353 aaPredicted RBP15.43■□□□□ 0.06
SLC28A1-203ENST00000394573 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
SLC28A1-203ENST00000394573 RPRD2Q5VT52 1461 aaKnown RBP15.42■□□□□ 0.06
SLC28A1-203ENST00000394573 AK9Q5TCS8 1911 aa15.42■□□□□ 0.06
SLC28A1-203ENST00000394573 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms