RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
GTF2F1-201ENST00000394456 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
GTF2F1-201ENST00000394456 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
GTF2F1-201ENST00000394456 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
GTF2F1-201ENST00000394456 PARD3Q8TEW0 1356 aa18.09■□□□□ 0.49
GTF2F1-201ENST00000394456 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
GTF2F1-201ENST00000394456 NEO1Q92859 1461 aa18.09■□□□□ 0.49
GTF2F1-201ENST00000394456 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
GTF2F1-201ENST00000394456 KIF1BO60333 1816 aa18.08■□□□□ 0.48
GTF2F1-201ENST00000394456 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
GTF2F1-201ENST00000394456 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
GTF2F1-201ENST00000394456 MROH2AA6NES4 1674 aa18.05■□□□□ 0.48
GTF2F1-201ENST00000394456 PLIN1O60240 522 aa18.05■□□□□ 0.48
GTF2F1-201ENST00000394456 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
GTF2F1-201ENST00000394456 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
GTF2F1-201ENST00000394456 RICTORQ6R327 1708 aa18.04■□□□□ 0.48
GTF2F1-201ENST00000394456 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
GTF2F1-201ENST00000394456 LMTK2Q8IWU2 1503 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 CHGAP10645 457 aaKnown RBP18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 NPATQ14207 1427 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
GTF2F1-201ENST00000394456 TSPOAP1O95153 1857 aa18.02■□□□□ 0.48
GTF2F1-201ENST00000394456 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
GTF2F1-201ENST00000394456 TMF1P82094 1093 aa18.01■□□□□ 0.47
GTF2F1-201ENST00000394456 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
GTF2F1-201ENST00000394456 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
GTF2F1-201ENST00000394456 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
GTF2F1-201ENST00000394456 ABCC3O15438 1527 aa17.99■□□□□ 0.47
GTF2F1-201ENST00000394456 CFAP70Q5T0N1 1121 aa17.99■□□□□ 0.47
GTF2F1-201ENST00000394456 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
GTF2F1-201ENST00000394456 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
GTF2F1-201ENST00000394456 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
GTF2F1-201ENST00000394456 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
GTF2F1-201ENST00000394456 GLI2P10070 1586 aa17.97■□□□□ 0.47
GTF2F1-201ENST00000394456 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
GTF2F1-201ENST00000394456 ADAMTS8Q9UP79 889 aa17.96■□□□□ 0.47
GTF2F1-201ENST00000394456 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
GTF2F1-201ENST00000394456 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
GTF2F1-201ENST00000394456 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
GTF2F1-201ENST00000394456 NOS1P29475 1434 aa17.95■□□□□ 0.46
GTF2F1-201ENST00000394456 MYOM2P54296 1465 aa17.95■□□□□ 0.46
GTF2F1-201ENST00000394456 ADGRB3O60242 1522 aa17.94■□□□□ 0.46
GTF2F1-201ENST00000394456 C20orf194Q5TEA3 1177 aa17.92■□□□□ 0.46
GTF2F1-201ENST00000394456 NBR1Q14596 966 aa17.91■□□□□ 0.46
GTF2F1-201ENST00000394456 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
GTF2F1-201ENST00000394456 PPLO60437 1756 aa17.9■□□□□ 0.46
GTF2F1-201ENST00000394456 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
GTF2F1-201ENST00000394456 NUTM2DQ5VT03 806 aaPredicted RBP17.9■□□□□ 0.46
GTF2F1-201ENST00000394456 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
GTF2F1-201ENST00000394456 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
GTF2F1-201ENST00000394456 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.45
GTF2F1-201ENST00000394456 EIF3AQ14152 1382 aaKnown RBP17.89■□□□□ 0.45
GTF2F1-201ENST00000394456 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
GTF2F1-201ENST00000394456 SYNMO15061 1565 aa17.89■□□□□ 0.45
GTF2F1-201ENST00000394456 KNSTRNQ9Y448 316 aa17.88■□□□□ 0.45
GTF2F1-201ENST00000394456 PLEKHH1Q9ULM0 1364 aa17.88■□□□□ 0.45
GTF2F1-201ENST00000394456 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
GTF2F1-201ENST00000394456 PDE3BQ13370 1112 aa17.87■□□□□ 0.45
GTF2F1-201ENST00000394456 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
GTF2F1-201ENST00000394456 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
GTF2F1-201ENST00000394456 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
GTF2F1-201ENST00000394456 MYOM1P52179 1685 aa17.85■□□□□ 0.45
GTF2F1-201ENST00000394456 ZC3H13Q5T200 1668 aaKnown RBP17.85■□□□□ 0.45
GTF2F1-201ENST00000394456 PIK3C2BO00750 1634 aa17.84■□□□□ 0.45
GTF2F1-201ENST00000394456 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
GTF2F1-201ENST00000394456 ZMYM4Q5VZL5 1548 aa17.84■□□□□ 0.45
GTF2F1-201ENST00000394456 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
GTF2F1-201ENST00000394456 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
GTF2F1-201ENST00000394456 PIK3C2GO75747 1445 aa17.83■□□□□ 0.45
GTF2F1-201ENST00000394456 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.45
GTF2F1-201ENST00000394456 MYO5BQ9ULV0 1848 aa17.83■□□□□ 0.44
GTF2F1-201ENST00000394456 IDI1Q13907 227 aa17.83■□□□□ 0.44
GTF2F1-201ENST00000394456 IPO9Q96P70 1041 aaKnown RBP17.82■□□□□ 0.44
GTF2F1-201ENST00000394456 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
GTF2F1-201ENST00000394456 ANP32AP39687 249 aaKnown RBP17.81■□□□□ 0.44
GTF2F1-201ENST00000394456 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
GTF2F1-201ENST00000394456 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.447e-9■■■□□ 16.9
GTF2F1-201ENST00000394456 ARHGAP31Q2M1Z3 1444 aa17.8■□□□□ 0.44
GTF2F1-201ENST00000394456 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
GTF2F1-201ENST00000394456 PREX1Q8TCU6 1659 aa17.8■□□□□ 0.44
GTF2F1-201ENST00000394456 PDE4AP27815 886 aa17.8■□□□□ 0.44
GTF2F1-201ENST00000394456 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 FBXO31Q5XUX0 539 aaPredicted RBP17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 NEXMIFQ5QGS0 1516 aa17.79■□□□□ 0.44
GTF2F1-201ENST00000394456 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
GTF2F1-201ENST00000394456 DMRT2Q9Y5R5 561 aa17.78■□□□□ 0.44
GTF2F1-201ENST00000394456 CENPJQ9HC77 1338 aaPredicted RBP17.78■□□□□ 0.44
GTF2F1-201ENST00000394456 MYO3AQ8NEV4 1616 aa17.78■□□□□ 0.44
GTF2F1-201ENST00000394456 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
GTF2F1-201ENST00000394456 MLECQ14165 292 aa17.77■□□□□ 0.44
GTF2F1-201ENST00000394456 QRICH2Q9H0J4 1663 aa17.76■□□□□ 0.43
GTF2F1-201ENST00000394456 APAF1O14727 1248 aa17.75■□□□□ 0.43
GTF2F1-201ENST00000394456 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
GTF2F1-201ENST00000394456 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms