RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	DIP2C	Q9Y2E4	1556 aa		12.78	□□□□□ -0.36
MITF-205	ENST00000394348	ZNF326	Q5BKZ1	582 aa	Known RBP	12.78	□□□□□ -0.36
MITF-205	ENST00000394348	GTF3C3	Q9Y5Q9	886 aa		12.78	□□□□□ -0.36
MITF-205	ENST00000394348	KIF1B	O60333	1816 aa		12.76	□□□□□ -0.37
MITF-205	ENST00000394348	ABCC3	O15438	1527 aa		12.75	□□□□□ -0.37
MITF-205	ENST00000394348	IQGAP1	P46940	1657 aa		12.75	□□□□□ -0.37
MITF-205	ENST00000394348	KTN1	Q86UP2	1357 aa	Known RBP	12.75	□□□□□ -0.37
MITF-205	ENST00000394348	RERE	Q9P2R6	1566 aa		12.75	□□□□□ -0.37
MITF-205	ENST00000394348	IFT172	Q9UG01	1749 aa		12.75	□□□□□ -0.37
MITF-205	ENST00000394348	MYT1L	Q9UL68	1186 aa		12.75	□□□□□ -0.37
MITF-205	ENST00000394348	ADGRB3	O60242	1522 aa		12.74	□□□□□ -0.37
MITF-205	ENST00000394348	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.74	□□□□□ -0.37
MITF-205	ENST00000394348	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.74	□□□□□ -0.37
MITF-205	ENST00000394348	KDM2A	Q9Y2K7	1162 aa		12.74	□□□□□ -0.37
MITF-205	ENST00000394348	ARHGAP31	Q2M1Z3	1444 aa		12.73	□□□□□ -0.37
MITF-205	ENST00000394348	CAMSAP1	Q5T5Y3	1602 aa		12.73	□□□□□ -0.37
MITF-205	ENST00000394348	NRXN1	Q9ULB1	1477 aa		12.72	□□□□□ -0.37
MITF-205	ENST00000394348	ST20-MTHFS	A0A0A6YYL1	179 aa		12.71	□□□□□ -0.37
MITF-205	ENST00000394348	RGL3	Q3MIN7	710 aa		12.71	□□□□□ -0.37
MITF-205	ENST00000394348	NPAT	Q14207	1427 aa		12.71	□□□□□ -0.38
MITF-205	ENST00000394348	MKRN4P	Q13434	485 aa	Predicted RBP	12.7	□□□□□ -0.38
MITF-205	ENST00000394348	CYB5RL	Q6IPT4	315 aa		12.7	□□□□□ -0.38
MITF-205	ENST00000394348	SCAF11	Q99590	1463 aa	Known RBP	12.7	□□□□□ -0.38
MITF-205	ENST00000394348	NOS1	P29475	1434 aa		12.7	□□□□□ -0.38
MITF-205	ENST00000394348	PIK3C2B	O00750	1634 aa		12.7	□□□□□ -0.38
MITF-205	ENST00000394348	AGL	P35573	1532 aa		12.68	□□□□□ -0.38
MITF-205	ENST00000394348	MROH2A	A6NES4	1674 aa		12.68	□□□□□ -0.38
MITF-205	ENST00000394348	SLC24A1	O60721	1099 aa		12.68	□□□□□ -0.38
MITF-205	ENST00000394348	SETBP1	Q9Y6X0	1596 aa		12.68	□□□□□ -0.38
MITF-205	ENST00000394348	EIF3A	Q14152	1382 aa	Known RBP	12.68	□□□□□ -0.38
MITF-205	ENST00000394348	NBPF1	Q3BBV0	1214 aa		12.67	□□□□□ -0.38
MITF-205	ENST00000394348	PPL	O60437	1756 aa		12.66	□□□□□ -0.38
MITF-205	ENST00000394348	RPGRIP1L	Q68CZ1	1315 aa		12.66	□□□□□ -0.38
MITF-205	ENST00000394348	WASHC2C	Q9Y4E1	1318 aa		12.66	□□□□□ -0.38
MITF-205	ENST00000394348	TESK2	Q96S53	571 aa		12.66	□□□□□ -0.38
MITF-205	ENST00000394348	MYO3A	Q8NEV4	1616 aa		12.66	□□□□□ -0.38
MITF-205	ENST00000394348	UGGT1	Q9NYU2	1555 aa		12.65	□□□□□ -0.38
MITF-205	ENST00000394348	RBM42	Q9BTD8	480 aa	Known RBP	12.65	□□□□□ -0.38
MITF-205	ENST00000394348	YEATS2	Q9ULM3	1422 aa		12.64	□□□□□ -0.39
MITF-205	ENST00000394348	RAPGEF3	O95398	923 aa		12.64	□□□□□ -0.39
MITF-205	ENST00000394348	TMF1	P82094	1093 aa		12.64	□□□□□ -0.39
MITF-205	ENST00000394348	FAM69C	Q0P6D2	419 aa		12.63	□□□□□ -0.39
MITF-205	ENST00000394348	RALBP1	Q15311	655 aa		12.63	□□□□□ -0.39
MITF-205	ENST00000394348	CDCA8	Q53HL2	280 aa		12.63	□□□□□ -0.39
MITF-205	ENST00000394348	SYNM	O15061	1565 aa		12.63	□□□□□ -0.39
MITF-205	ENST00000394348	SIGLEC1	Q9BZZ2	1709 aa		12.62	□□□□□ -0.39
MITF-205	ENST00000394348	SBNO2	Q9Y2G9	1366 aa		12.62	□□□□□ -0.39
MITF-205	ENST00000394348	KIF13A	Q9H1H9	1805 aa		12.62	□□□□□ -0.39
MITF-205	ENST00000394348	DISP3	Q9P2K9	1392 aa		12.61	□□□□□ -0.39
MITF-205	ENST00000394348	MRS2	Q9HD23	443 aa		12.61	□□□□□ -0.39
MITF-205	ENST00000394348	ARHGEF40	Q8TER5	1519 aa		12.61	□□□□□ -0.39
MITF-205	ENST00000394348	PIK3C2G	O75747	1445 aa		12.61	□□□□□ -0.39
MITF-205	ENST00000394348	PREX1	Q8TCU6	1659 aa		12.61	□□□□□ -0.39
MITF-205	ENST00000394348	BRD4	O60885	1362 aa	Predicted RBP	12.6	□□□□□ -0.39
MITF-205	ENST00000394348	GGT6	Q6P531	493 aa		12.6	□□□□□ -0.39
MITF-205	ENST00000394348	ZFYVE9	O95405	1425 aa		12.6	□□□□□ -0.39
MITF-205	ENST00000394348	PARD3	Q8TEW0	1356 aa		12.59	□□□□□ -0.39
MITF-205	ENST00000394348	INSR	P06213	1382 aa		12.58	□□□□□ -0.4
MITF-205	ENST00000394348	NEXMIF	Q5QGS0	1516 aa		12.58	□□□□□ -0.4
MITF-205	ENST00000394348	KDM5A	P29375	1690 aa	Known RBP	12.58	□□□□□ -0.4
MITF-205	ENST00000394348	TSPOAP1	O95153	1857 aa		12.58	□□□□□ -0.4
MITF-205	ENST00000394348	SLC52A1	Q9NWF4	448 aa		12.58	□□□□□ -0.4
MITF-205	ENST00000394348	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.58	□□□□□ -0.4
MITF-205	ENST00000394348	POLR3GL	Q9BT43	218 aa		12.57	□□□□□ -0.4
MITF-205	ENST00000394348	ZBED9	Q6R2W3	1325 aa		12.57	□□□□□ -0.4
MITF-205	ENST00000394348	ADGRB1	O14514	1584 aa		12.56	□□□□□ -0.4
MITF-205	ENST00000394348	PER1	O15534	1290 aa	Predicted RBP	12.56	□□□□□ -0.4
MITF-205	ENST00000394348	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
MITF-205	ENST00000394348	ADGRF5	Q8IZF2	1346 aa		12.56	□□□□□ -0.4
MITF-205	ENST00000394348	NPC1L1	Q9UHC9	1359 aa		12.56	□□□□□ -0.4
MITF-205	ENST00000394348	MYOM1	P52179	1685 aa		12.55	□□□□□ -0.4
MITF-205	ENST00000394348	TMEM131L	A2VDJ0	1609 aa		12.55	□□□□□ -0.4
MITF-205	ENST00000394348	ERVK-7	P63135	1459 aa		12.54	□□□□□ -0.4
MITF-205	ENST00000394348	CCDC184	Q52MB2	194 aa		12.54	□□□□□ -0.4
MITF-205	ENST00000394348	C14orf93	Q9H972	538 aa	Known RBP	12.54	□□□□□ -0.4
MITF-205	ENST00000394348	LRPPRC	P42704	1394 aa	Known RBP	12.54	□□□□□ -0.4
MITF-205	ENST00000394348	SPATA31D1	Q6ZQQ2	1576 aa		12.53	□□□□□ -0.4
MITF-205	ENST00000394348	NLRP13	Q86W25	1043 aa		12.53	□□□□□ -0.4
MITF-205	ENST00000394348	VGF	O15240	615 aa	Predicted RBP	12.52	□□□□□ -0.41
MITF-205	ENST00000394348	CFAP70	Q5T0N1	1121 aa		12.52	□□□□□ -0.41
MITF-205	ENST00000394348	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.52	□□□□□ -0.41
MITF-205	ENST00000394348	CFAP65	Q6ZU64	1925 aa	Known RBP	12.52	□□□□□ -0.41
MITF-205	ENST00000394348	TMC1	Q8TDI8	760 aa		12.5	□□□□□ -0.41
MITF-205	ENST00000394348	PNISR	Q8TF01	805 aa	Known RBP	12.5	□□□□□ -0.41
MITF-205	ENST00000394348	PUS7	Q96PZ0	661 aa	Known RBP	12.5	□□□□□ -0.41
MITF-205	ENST00000394348	ASXL1	Q8IXJ9	1541 aa		12.5	□□□□□ -0.41
MITF-205	ENST00000394348	QRICH2	Q9H0J4	1663 aa		12.5	□□□□□ -0.41
MITF-205	ENST00000394348	CLTC	Q00610	1675 aa	Known RBP	12.49	□□□□□ -0.41
MITF-205	ENST00000394348	SPDYE2B	A6NHP3	402 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	NEFL	P07196	543 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	SPDYE6	P0CI01	402 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	SPDYE2	Q495Y8	402 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	FAM9B	Q8IZU0	186 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	PANK3	Q9H999	370 aa		12.49	□□□□□ -0.41
MITF-205	ENST00000394348	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.48	□□□□□ -0.41
MITF-205	ENST00000394348	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.48	□□□□□ -0.41
MITF-205	ENST00000394348	CHGA	P10645	457 aa	Known RBP	12.48	□□□□□ -0.41
MITF-205	ENST00000394348	MYO5B	Q9ULV0	1848 aa		12.47	□□□□□ -0.41
MITF-205	ENST00000394348	IDI1	Q13907	227 aa		12.47	□□□□□ -0.41
MITF-205	ENST00000394348	PELP1	Q8IZL8	1130 aa	Known RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms