RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 RIPK4P57078 832 aa13.51□□□□□ -0.25
MTHFD2-201ENST00000394053 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
MTHFD2-201ENST00000394053 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
MTHFD2-201ENST00000394053 HMOX1P09601 288 aa13.5□□□□□ -0.25
MTHFD2-201ENST00000394053 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
MTHFD2-201ENST00000394053 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
MTHFD2-201ENST00000394053 CTTNBP2Q8WZ74 1663 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 NUTM2GQ5VZR2 741 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 IDI1Q13907 227 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 CCDC9Q9Y3X0 531 aaKnown RBP13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 WDR62O43379 1518 aa13.49□□□□□ -0.25
MTHFD2-201ENST00000394053 NLRP6P59044 892 aa13.48□□□□□ -0.25
MTHFD2-201ENST00000394053 CCDC184Q52MB2 194 aa13.48□□□□□ -0.25
MTHFD2-201ENST00000394053 EXOC6Q8TAG9 804 aa13.48□□□□□ -0.25
MTHFD2-201ENST00000394053 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
MTHFD2-201ENST00000394053 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
MTHFD2-201ENST00000394053 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
MTHFD2-201ENST00000394053 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
MTHFD2-201ENST00000394053 TCERG1O14776 1098 aaKnown RBP13.47□□□□□ -0.25
MTHFD2-201ENST00000394053 PLCH2O75038 1416 aa13.47□□□□□ -0.25
MTHFD2-201ENST00000394053 ASXL2Q76L83 1435 aa13.46□□□□□ -0.25
MTHFD2-201ENST00000394053 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
MTHFD2-201ENST00000394053 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 NUP160Q12769 1436 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 ATF3P18847 181 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 ADGRF5Q8IZF2 1346 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 DENND4BO75064 1496 aaPredicted RBP13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 KCNJ4P48050 445 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 TEFQ10587 303 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
MTHFD2-201ENST00000394053 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
MTHFD2-201ENST00000394053 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
MTHFD2-201ENST00000394053 DISP1Q96F81 1524 aa13.44□□□□□ -0.26
MTHFD2-201ENST00000394053 C1orf141Q5JVX7 400 aa13.43□□□□□ -0.26
MTHFD2-201ENST00000394053 PROSER2Q86WR7 435 aaPredicted RBP13.43□□□□□ -0.26
MTHFD2-201ENST00000394053 POGZQ7Z3K3 1410 aa13.42□□□□□ -0.26
MTHFD2-201ENST00000394053 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
MTHFD2-201ENST00000394053 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
MTHFD2-201ENST00000394053 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
MTHFD2-201ENST00000394053 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
MTHFD2-201ENST00000394053 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 EVA1CP58658 441 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 HMMRO75330 724 aa13.41□□□□□ -0.26
MTHFD2-201ENST00000394053 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
MTHFD2-201ENST00000394053 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
MTHFD2-201ENST00000394053 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
MTHFD2-201ENST00000394053 FGD1P98174 961 aa13.39□□□□□ -0.27
MTHFD2-201ENST00000394053 SYCP2Q9BX26 1530 aa13.39□□□□□ -0.27
MTHFD2-201ENST00000394053 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
MTHFD2-201ENST00000394053 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
MTHFD2-201ENST00000394053 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 HDAC5Q9UQL6 1122 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 GNAI1P63096 354 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
MTHFD2-201ENST00000394053 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 MAPKBP1O60336 1514 aa13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 ATAD2Q6PL18 1390 aa13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 KDM5BQ9UGL1 1544 aa13.36□□□□□ -0.27
MTHFD2-201ENST00000394053 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 NUDT16Q96DE0 195 aaKnown RBP13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
MTHFD2-201ENST00000394053 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 NOS1P29475 1434 aa13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 MCCP23508 829 aa13.34□□□□□ -0.27
MTHFD2-201ENST00000394053 KIAA1211Q6ZU35 1233 aa13.33□□□□□ -0.27
MTHFD2-201ENST00000394053 DDX19BQ9UMR2 479 aa13.33□□□□□ -0.27
MTHFD2-201ENST00000394053 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 C14orf93Q9H972 538 aaKnown RBP13.33□□□□□ -0.28
MTHFD2-201ENST00000394053 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms