RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 ZC3H15Q8WU90 426 aaKnown RBP10.29□□□□□ -0.76
SUCLG1-201ENST00000393868 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
SUCLG1-201ENST00000393868 CUX2O14529 1486 aa10.28□□□□□ -0.76
SUCLG1-201ENST00000393868 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
SUCLG1-201ENST00000393868 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
SUCLG1-201ENST00000393868 TOP2AP11388 1531 aaKnown RBP10.28□□□□□ -0.76
SUCLG1-201ENST00000393868 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.76
SUCLG1-201ENST00000393868 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
SUCLG1-201ENST00000393868 DNAJB2P25686 324 aa10.27□□□□□ -0.77
SUCLG1-201ENST00000393868 HCSTQ9UBK5 93 aa10.27□□□□□ -0.77
SUCLG1-201ENST00000393868 SOWAHBA6NEL2 793 aa10.26□□□□□ -0.77
SUCLG1-201ENST00000393868 METTL3Q86U44 580 aaKnown RBP10.26□□□□□ -0.77
SUCLG1-201ENST00000393868 PXYLP1Q8TE99 480 aa10.26□□□□□ -0.77
SUCLG1-201ENST00000393868 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
SUCLG1-201ENST00000393868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
SUCLG1-201ENST00000393868 BCAMP50895 628 aa10.25□□□□□ -0.77
SUCLG1-201ENST00000393868 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SUCLG1-201ENST00000393868 ZMYND10O75800 440 aa10.24□□□□□ -0.77
SUCLG1-201ENST00000393868 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
SUCLG1-201ENST00000393868 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
SUCLG1-201ENST00000393868 CCDC88BA6NC98 1476 aa10.24□□□□□ -0.77
SUCLG1-201ENST00000393868 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 PTPN5P54829 565 aa10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 KRI1Q8N9T8 703 aaKnown RBP10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 IRF6O14896 467 aa10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
SUCLG1-201ENST00000393868 TMEM134Q9H6X4 195 aa10.22□□□□□ -0.77
SUCLG1-201ENST00000393868 NCAPD3P42695 1498 aa10.21□□□□□ -0.77
SUCLG1-201ENST00000393868 ERCC6Q03468 1493 aa10.21□□□□□ -0.77
SUCLG1-201ENST00000393868 SLF2Q8IX21 1173 aa10.21□□□□□ -0.78
SUCLG1-201ENST00000393868 NECTIN2Q92692 538 aa10.21□□□□□ -0.78
SUCLG1-201ENST00000393868 CCDC102AQ96A19 550 aa10.21□□□□□ -0.78
SUCLG1-201ENST00000393868 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.78
SUCLG1-201ENST00000393868 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.78
SUCLG1-201ENST00000393868 RNF40O75150 1001 aa10.2□□□□□ -0.78
SUCLG1-201ENST00000393868 PPP4CP60510 307 aa10.18□□□□□ -0.78
SUCLG1-201ENST00000393868 NYAP1Q6ZVC0 841 aa10.18□□□□□ -0.78
SUCLG1-201ENST00000393868 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
SUCLG1-201ENST00000393868 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
SUCLG1-201ENST00000393868 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
SUCLG1-201ENST00000393868 HMGXB3Q12766 1538 aa10.15□□□□□ -0.79
SUCLG1-201ENST00000393868 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
SUCLG1-201ENST00000393868 NLRP7Q8WX94 980 aa10.13□□□□□ -0.79
SUCLG1-201ENST00000393868 AK7Q96M32 723 aa10.12□□□□□ -0.79
SUCLG1-201ENST00000393868 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
SUCLG1-201ENST00000393868 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
SUCLG1-201ENST00000393868 SULF1Q8IWU6 871 aa10.1□□□□□ -0.79
SUCLG1-201ENST00000393868 CLCN1P35523 988 aa10.1□□□□□ -0.79
SUCLG1-201ENST00000393868 KMT5BQ4FZB7 885 aa10.09□□□□□ -0.79
SUCLG1-201ENST00000393868 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
SUCLG1-201ENST00000393868 RDH13Q8NBN7 331 aa10.08□□□□□ -0.8
SUCLG1-201ENST00000393868 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
SUCLG1-201ENST00000393868 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
SUCLG1-201ENST00000393868 CFHP08603 1231 aa10.07□□□□□ -0.8
SUCLG1-201ENST00000393868 AMHR2Q16671 573 aa10.07□□□□□ -0.8
SUCLG1-201ENST00000393868 TRIM66O15016 1216 aa10.06□□□□□ -0.8
SUCLG1-201ENST00000393868 SLC10A3P09131 477 aa10.06□□□□□ -0.8
SUCLG1-201ENST00000393868 APLP1P51693 650 aa10.06□□□□□ -0.8
SUCLG1-201ENST00000393868 TTLL12Q14166 644 aaPredicted RBP10.06□□□□□ -0.8
SUCLG1-201ENST00000393868 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
SUCLG1-201ENST00000393868 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
SUCLG1-201ENST00000393868 ACTN4O43707 911 aaKnown RBP10.02□□□□□ -0.81
SUCLG1-201ENST00000393868 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
SUCLG1-201ENST00000393868 NESP48681 1621 aa10.02□□□□□ -0.81
SUCLG1-201ENST00000393868 CADPSQ9ULU8 1353 aa10.01□□□□□ -0.81
SUCLG1-201ENST00000393868 CD46P15529 392 aa10.01□□□□□ -0.81
SUCLG1-201ENST00000393868 FAM9AQ8IZU1 332 aaPredicted RBP10.01□□□□□ -0.81
SUCLG1-201ENST00000393868 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
SUCLG1-201ENST00000393868 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
SUCLG1-201ENST00000393868 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
SUCLG1-201ENST00000393868 GCGRP47871 477 aa9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 PDE4DQ08499 809 aa9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 ABCC8Q09428 1581 aa9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 MTRQ99707 1265 aa9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
SUCLG1-201ENST00000393868 KCNC4Q03721 635 aa9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 PARP9Q8IXQ6 854 aa9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 CFTRP13569 1480 aa9.98□□□□□ -0.81
SUCLG1-201ENST00000393868 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
SUCLG1-201ENST00000393868 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
SUCLG1-201ENST00000393868 COPS2P61201 443 aa9.96□□□□□ -0.82
SUCLG1-201ENST00000393868 BLOC1S3Q6QNY0 202 aa9.95□□□□□ -0.82
SUCLG1-201ENST00000393868 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
SUCLG1-201ENST00000393868 NR1I2O75469 434 aa9.94□□□□□ -0.82
SUCLG1-201ENST00000393868 GRIPAP1Q4V328 841 aa9.94□□□□□ -0.82
SUCLG1-201ENST00000393868 KDM4AO75164 1064 aa9.93□□□□□ -0.82
SUCLG1-201ENST00000393868 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
SUCLG1-201ENST00000393868 USP46P62068 366 aa9.93□□□□□ -0.82
SUCLG1-201ENST00000393868 FUT2Q10981 343 aa9.93□□□□□ -0.82
SUCLG1-201ENST00000393868 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
SUCLG1-201ENST00000393868 LOC105371045A0A1W2PR82 267 aa9.91□□□□□ -0.82
SUCLG1-201ENST00000393868 ZPR1O75312 459 aa9.91□□□□□ -0.82
SUCLG1-201ENST00000393868 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
SUCLG1-201ENST00000393868 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
SUCLG1-201ENST00000393868 MORN1Q5T089 497 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms