RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
TSPAN8-202ENST00000393330 KDM5BQ9UGL1 1544 aa8.7□□□□□ -1.02
TSPAN8-202ENST00000393330 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
TSPAN8-202ENST00000393330 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
TSPAN8-202ENST00000393330 MED1Q15648 1581 aaPredicted RBP8.67□□□□□ -1.02
TSPAN8-202ENST00000393330 BCORL1Q5H9F3 1711 aa8.67□□□□□ -1.02
TSPAN8-202ENST00000393330 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
TSPAN8-202ENST00000393330 POGZQ7Z3K3 1410 aa8.67□□□□□ -1.02
TSPAN8-202ENST00000393330 WDR7Q9Y4E6 1490 aa8.66□□□□□ -1.02
TSPAN8-202ENST00000393330 PSDA5PKW4 1024 aaPredicted RBP8.65□□□□□ -1.02
TSPAN8-202ENST00000393330 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
TSPAN8-202ENST00000393330 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
TSPAN8-202ENST00000393330 KCNH8Q96L42 1107 aa8.65□□□□□ -1.02
TSPAN8-202ENST00000393330 ANO8Q9HCE9 1232 aaPredicted RBP8.65□□□□□ -1.02
TSPAN8-202ENST00000393330 HSPA1LP34931 641 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 LTBP4Q8N2S1 1624 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
TSPAN8-202ENST00000393330 CUL7Q14999 1698 aa8.63□□□□□ -1.03
TSPAN8-202ENST00000393330 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
TSPAN8-202ENST00000393330 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
TSPAN8-202ENST00000393330 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
TSPAN8-202ENST00000393330 CFAP43Q8NDM7 1665 aa8.6□□□□□ -1.03
TSPAN8-202ENST00000393330 UHRF1BP1Q6BDS2 1440 aa8.6□□□□□ -1.03
TSPAN8-202ENST00000393330 TOM1O60784 492 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 FOSBP53539 338 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 DDX12PQ92771 950 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
TSPAN8-202ENST00000393330 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
TSPAN8-202ENST00000393330 ARHGAP33O14559 1287 aa8.58□□□□□ -1.04
TSPAN8-202ENST00000393330 PDIA6Q15084 440 aa8.58□□□□□ -1.04
TSPAN8-202ENST00000393330 FANCAO15360 1455 aa8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 PBX2P40425 430 aa8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 PSEN2P49810 448 aa8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 ARIH1Q9Y4X5 557 aaPredicted RBP8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
TSPAN8-202ENST00000393330 STRCQ7RTU9 1775 aa8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 PIP4K2BP78356 416 aa8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 MLECQ14165 292 aa8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 KCNK17Q96T54 332 aa8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 ZCCHC11Q5TAX3 1644 aaKnown RBP8.56□□□□□ -1.04
TSPAN8-202ENST00000393330 PHF14O94880 888 aa8.55□□□□□ -1.04
TSPAN8-202ENST00000393330 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
TSPAN8-202ENST00000393330 AKNAQ7Z591 1439 aa8.55□□□□□ -1.04
TSPAN8-202ENST00000393330 GRXCR2A6NFK2 248 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 SPNS2Q8IVW8 549 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 NEO1Q92859 1461 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 PTGER2P43116 358 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 BCL2L12Q9HB09 334 aa8.54□□□□□ -1.04
TSPAN8-202ENST00000393330 PTPREP23469 700 aa8.53□□□□□ -1.04
TSPAN8-202ENST00000393330 NBR1Q14596 966 aa8.53□□□□□ -1.04
TSPAN8-202ENST00000393330 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
TSPAN8-202ENST00000393330 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
TSPAN8-202ENST00000393330 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.05
TSPAN8-202ENST00000393330 FBXW7Q969H0 707 aa8.52□□□□□ -1.05
TSPAN8-202ENST00000393330 EPAS1Q99814 870 aa8.52□□□□□ -1.05
TSPAN8-202ENST00000393330 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
TSPAN8-202ENST00000393330 TTC37Q6PGP7 1564 aa8.51□□□□□ -1.05
TSPAN8-202ENST00000393330 IGF1RP08069 1367 aa8.5□□□□□ -1.05
TSPAN8-202ENST00000393330 NCOA1Q15788 1441 aa8.49□□□□□ -1.05
TSPAN8-202ENST00000393330 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
TSPAN8-202ENST00000393330 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
TSPAN8-202ENST00000393330 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 MAP3K7O43318 606 aa8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 ADGRD1Q6QNK2 874 aa8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 FAM9AQ8IZU1 332 aaPredicted RBP8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 DENND4BO75064 1496 aaPredicted RBP8.48□□□□□ -1.05
TSPAN8-202ENST00000393330 MLLT3P42568 568 aaPredicted RBP8.47□□□□□ -1.05
TSPAN8-202ENST00000393330 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
TSPAN8-202ENST00000393330 FHOD3Q2V2M9 1422 aa8.47□□□□□ -1.05
TSPAN8-202ENST00000393330 MAGI2Q86UL8 1455 aa8.46□□□□□ -1.05
TSPAN8-202ENST00000393330 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.05
TSPAN8-202ENST00000393330 POTEAQ6S8J7 498 aa8.46□□□□□ -1.05
TSPAN8-202ENST00000393330 SEMA3EO15041 775 aa8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 COL9A1P20849 921 aa8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 OSBPP22059 807 aa8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 IQGAP2Q13576 1575 aa8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 PTPRKQ15262 1439 aa8.45□□□□□ -1.06
TSPAN8-202ENST00000393330 TK2O00142 265 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 STAC3Q96MF2 364 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 TRAPPC8Q9Y2L5 1435 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 ARHGEF12Q9NZN5 1544 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms