RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
GSE1-202ENST00000393243 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
GSE1-202ENST00000393243 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
GSE1-202ENST00000393243 APAF1O14727 1248 aa16.38■□□□□ 0.21
GSE1-202ENST00000393243 CPLX1O14810 134 aa16.38■□□□□ 0.21
GSE1-202ENST00000393243 GPS2Q13227 327 aa16.38■□□□□ 0.21
GSE1-202ENST00000393243 VPS37DQ86XT2 251 aa16.38■□□□□ 0.21
GSE1-202ENST00000393243 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
GSE1-202ENST00000393243 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
GSE1-202ENST00000393243 IFIT2P09913 472 aaKnown RBP16.37■□□□□ 0.21
GSE1-202ENST00000393243 TEFQ10587 303 aa16.36■□□□□ 0.21
GSE1-202ENST00000393243 ATP6V1DQ9Y5K8 247 aa16.36■□□□□ 0.21
GSE1-202ENST00000393243 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
GSE1-202ENST00000393243 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
GSE1-202ENST00000393243 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
GSE1-202ENST00000393243 CHMP4AQ9BY43 222 aa16.36■□□□□ 0.21
GSE1-202ENST00000393243 IFT57Q9NWB7 429 aa16.35■□□□□ 0.21
GSE1-202ENST00000393243 KIF15Q9NS87 1388 aa16.35■□□□□ 0.21
GSE1-202ENST00000393243 COG3Q96JB2 828 aa16.35■□□□□ 0.21
GSE1-202ENST00000393243 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
GSE1-202ENST00000393243 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
GSE1-202ENST00000393243 IPO7O95373 1038 aaKnown RBP16.34■□□□□ 0.21
GSE1-202ENST00000393243 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
GSE1-202ENST00000393243 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
GSE1-202ENST00000393243 PDILTQ8N807 584 aa16.33■□□□□ 0.21
GSE1-202ENST00000393243 LNPKQ9C0E8 428 aa16.33■□□□□ 0.21
GSE1-202ENST00000393243 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
GSE1-202ENST00000393243 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
GSE1-202ENST00000393243 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
GSE1-202ENST00000393243 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
GSE1-202ENST00000393243 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
GSE1-202ENST00000393243 ZKSCAN1P17029 563 aaPredicted RBP16.32■□□□□ 0.2
GSE1-202ENST00000393243 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
GSE1-202ENST00000393243 SASS6Q6UVJ0 657 aa16.32■□□□□ 0.2
GSE1-202ENST00000393243 RNF214Q8ND24 703 aa16.32■□□□□ 0.2
GSE1-202ENST00000393243 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
GSE1-202ENST00000393243 HMOX1P09601 288 aa16.31■□□□□ 0.2
GSE1-202ENST00000393243 ZFYVE27Q5T4F4 411 aa16.31■□□□□ 0.2
GSE1-202ENST00000393243 RIPK4P57078 832 aa16.31■□□□□ 0.2
GSE1-202ENST00000393243 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
GSE1-202ENST00000393243 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
GSE1-202ENST00000393243 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
GSE1-202ENST00000393243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.25e-7■■■■■ 105.5
GSE1-202ENST00000393243 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
GSE1-202ENST00000393243 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
GSE1-202ENST00000393243 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
GSE1-202ENST00000393243 E9PSI1 815 aa16.3■□□□□ 0.2
GSE1-202ENST00000393243 TEX35Q5T0J7 233 aa16.3■□□□□ 0.2
GSE1-202ENST00000393243 RUFY2Q8WXA3 655 aa16.3■□□□□ 0.2
GSE1-202ENST00000393243 RUFY1Q96T51 708 aa16.3■□□□□ 0.2
GSE1-202ENST00000393243 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
GSE1-202ENST00000393243 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
GSE1-202ENST00000393243 TRDNQ13061 729 aa16.29■□□□□ 0.2
GSE1-202ENST00000393243 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
GSE1-202ENST00000393243 CCDC43Q96MW1 224 aaKnown RBP16.29■□□□□ 0.2
GSE1-202ENST00000393243 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
GSE1-202ENST00000393243 REC8O95072 547 aa16.28■□□□□ 0.2
GSE1-202ENST00000393243 CCDC47Q96A33 483 aaKnown RBP16.28■□□□□ 0.2
GSE1-202ENST00000393243 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.28■□□□□ 0.24e-6■■■■□ 26.2
GSE1-202ENST00000393243 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
GSE1-202ENST00000393243 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
GSE1-202ENST00000393243 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
GSE1-202ENST00000393243 ERICH2A1L162 156 aa16.27■□□□□ 0.2
GSE1-202ENST00000393243 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.2
GSE1-202ENST00000393243 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
GSE1-202ENST00000393243 MNS1Q8NEH6 495 aa16.27■□□□□ 0.19
GSE1-202ENST00000393243 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
GSE1-202ENST00000393243 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
GSE1-202ENST00000393243 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
GSE1-202ENST00000393243 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
GSE1-202ENST00000393243 MPNDQ8N594 471 aa16.26■□□□□ 0.19
GSE1-202ENST00000393243 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
GSE1-202ENST00000393243 FAM43AQ8N2R8 423 aa16.26■□□□□ 0.19
GSE1-202ENST00000393243 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
GSE1-202ENST00000393243 ODF2Q5BJF6 829 aa16.25■□□□□ 0.19
GSE1-202ENST00000393243 CALRP27797 417 aaKnown RBP16.25■□□□□ 0.19
GSE1-202ENST00000393243 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
GSE1-202ENST00000393243 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
GSE1-202ENST00000393243 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
GSE1-202ENST00000393243 HOOK1Q9UJC3 728 aaKnown RBP16.24■□□□□ 0.19
GSE1-202ENST00000393243 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
GSE1-202ENST00000393243 EPS15P42566 896 aa16.24■□□□□ 0.19
GSE1-202ENST00000393243 BRPF1P55201 1214 aaPredicted RBP16.24■□□□□ 0.19
GSE1-202ENST00000393243 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
GSE1-202ENST00000393243 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 AK7Q96M32 723 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
GSE1-202ENST00000393243 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
GSE1-202ENST00000393243 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
GSE1-202ENST00000393243 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
GSE1-202ENST00000393243 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
GSE1-202ENST00000393243 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
GSE1-202ENST00000393243 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
GSE1-202ENST00000393243 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
GSE1-202ENST00000393243 PSME1Q06323 249 aa16.22■□□□□ 0.19
GSE1-202ENST00000393243 MEX3CQ5U5Q3 659 aaKnown RBP16.21■□□□□ 0.19
GSE1-202ENST00000393243 PLCD4Q9BRC7 762 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 615.5 ms