RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ROCK2O75116 1388 aaKnown RBP27.48■■□□□ 1.99
CSNK1D-203ENST00000392334 C11orf95C9JLR9 678 aaPredicted RBP27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 FKBP8Q14318 412 aa27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 USP47Q96K76 1375 aa27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 ADAMTSL3P82987 1691 aa27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
CSNK1D-203ENST00000392334 WASHC2AQ641Q2 1341 aa27.44■■□□□ 1.98
CSNK1D-203ENST00000392334 ADGRB3O60242 1522 aa27.42■■□□□ 1.98
CSNK1D-203ENST00000392334 NEFLP07196 543 aa27.41■■□□□ 1.98
CSNK1D-203ENST00000392334 MYO5BQ9ULV0 1848 aa27.4■■□□□ 1.98
CSNK1D-203ENST00000392334 TNRQ92752 1358 aa27.38■■□□□ 1.97
CSNK1D-203ENST00000392334 NEURL4Q96JN8 1562 aa27.38■■□□□ 1.97
CSNK1D-203ENST00000392334 TRPM1Q7Z4N2 1603 aa27.37■■□□□ 1.97
CSNK1D-203ENST00000392334 ST20-MTHFSA0A0A6YYL1 179 aa27.36■■□□□ 1.97
CSNK1D-203ENST00000392334 TMEM131LA2VDJ0 1609 aa27.36■■□□□ 1.97
CSNK1D-203ENST00000392334 ADGRF5Q8IZF2 1346 aa27.35■■□□□ 1.97
CSNK1D-203ENST00000392334 NUTM2DQ5VT03 806 aaPredicted RBP27.34■■□□□ 1.97
CSNK1D-203ENST00000392334 STAG3Q9UJ98 1225 aa27.34■■□□□ 1.97
CSNK1D-203ENST00000392334 POLR3GLQ9BT43 218 aa27.33■■□□□ 1.97
CSNK1D-203ENST00000392334 BCANQ96GW7 911 aa27.33■■□□□ 1.96
CSNK1D-203ENST00000392334 IFT172Q9UG01 1749 aa27.32■■□□□ 1.96
CSNK1D-203ENST00000392334 KIF7Q2M1P5 1343 aa27.3■■□□□ 1.96
CSNK1D-203ENST00000392334 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
CSNK1D-203ENST00000392334 PPLO60437 1756 aa27.29■■□□□ 1.96
CSNK1D-203ENST00000392334 SENP3Q9H4L4 574 aaPredicted RBP27.29■■□□□ 1.96
CSNK1D-203ENST00000392334 STAC3Q96MF2 364 aa27.28■■□□□ 1.96
CSNK1D-203ENST00000392334 CFAP70Q5T0N1 1121 aa27.28■■□□□ 1.96
CSNK1D-203ENST00000392334 A2ML1A8K2U0 1454 aa27.27■■□□□ 1.96
CSNK1D-203ENST00000392334 GPRASP1Q5JY77 1395 aa27.27■■□□□ 1.96
CSNK1D-203ENST00000392334 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.95
CSNK1D-203ENST00000392334 PTPRMP28827 1452 aa27.25■■□□□ 1.95
CSNK1D-203ENST00000392334 RPGRIP1LQ68CZ1 1315 aa27.23■■□□□ 1.95
CSNK1D-203ENST00000392334 MYOM2P54296 1465 aa27.22■■□□□ 1.95
CSNK1D-203ENST00000392334 NLRP1Q9C000 1473 aa27.22■■□□□ 1.95
CSNK1D-203ENST00000392334 UBR1Q8IWV7 1749 aa27.22■■□□□ 1.95
CSNK1D-203ENST00000392334 MYO3AQ8NEV4 1616 aa27.21■■□□□ 1.95
CSNK1D-203ENST00000392334 KDM4FA0A1W2PPD8 638 aa27.19■■□□□ 1.94
CSNK1D-203ENST00000392334 ANP32EQ9BTT0 268 aa27.19■■□□□ 1.94
CSNK1D-203ENST00000392334 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
CSNK1D-203ENST00000392334 NRXN1Q9ULB1 1477 aa27.17■■□□□ 1.94
CSNK1D-203ENST00000392334 KDM5AP29375 1690 aaKnown RBP27.15■■□□□ 1.94
CSNK1D-203ENST00000392334 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
CSNK1D-203ENST00000392334 RIMS2Q9UQ26 1411 aa27.15■■□□□ 1.94
CSNK1D-203ENST00000392334 POLR1AO95602 1720 aaPredicted RBP27.14■■□□□ 1.94
CSNK1D-203ENST00000392334 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
CSNK1D-203ENST00000392334 LAMC1P11047 1609 aa27.13■■□□□ 1.93
CSNK1D-203ENST00000392334 TMEM132EQ6IEE7 984 aa27.12■■□□□ 1.93
CSNK1D-203ENST00000392334 TESK2Q96S53 571 aa27.12■■□□□ 1.93
CSNK1D-203ENST00000392334 ZFYVE9O95405 1425 aa27.12■■□□□ 1.93
CSNK1D-203ENST00000392334 HNRNPUQ00839 825 aaKnown RBP eCLIP27.12■■□□□ 1.933e-18■□□□□ 9.1
CSNK1D-203ENST00000392334 CEP170BQ9Y4F5 1589 aaPredicted RBP27.11■■□□□ 1.93
CSNK1D-203ENST00000392334 TMEM2Q9UHN6 1383 aa27.11■■□□□ 1.93
CSNK1D-203ENST00000392334 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
CSNK1D-203ENST00000392334 SCAF11Q99590 1463 aaKnown RBP27.09■■□□□ 1.93
CSNK1D-203ENST00000392334 CNGB1Q14028 1251 aaPredicted RBP27.08■■□□□ 1.93
CSNK1D-203ENST00000392334 ERICH6BQ5W0A0 696 aa27.07■■□□□ 1.92
CSNK1D-203ENST00000392334 RBM19Q9Y4C8 960 aaKnown RBP27.07■■□□□ 1.92
CSNK1D-203ENST00000392334 DISP3Q9P2K9 1392 aa27.07■■□□□ 1.92
CSNK1D-203ENST00000392334 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
CSNK1D-203ENST00000392334 LTKP29376 864 aa27.06■■□□□ 1.92
CSNK1D-203ENST00000392334 THEMISQ8N1K5 641 aaPredicted RBP27.06■■□□□ 1.92
CSNK1D-203ENST00000392334 TRAK1Q9UPV9 953 aa27.05■■□□□ 1.92
CSNK1D-203ENST00000392334 IQGAP1P46940 1657 aa27.03■■□□□ 1.92
CSNK1D-203ENST00000392334 ZNF142P52746 1687 aaPredicted RBP27.03■■□□□ 1.92
CSNK1D-203ENST00000392334 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.03■■□□□ 1.92
CSNK1D-203ENST00000392334 TMF1P82094 1093 aa27.02■■□□□ 1.92
CSNK1D-203ENST00000392334 TXNDC2Q86VQ3 553 aa27.02■■□□□ 1.92
CSNK1D-203ENST00000392334 PRKRIP1Q9H875 184 aaPredicted RBP27.01■■□□□ 1.91
CSNK1D-203ENST00000392334 SLIT1O75093 1534 aa27■■□□□ 1.91
CSNK1D-203ENST00000392334 HDGFP51858 240 aaKnown RBP27■■□□□ 1.91
CSNK1D-203ENST00000392334 ARHGAP23Q9P227 1491 aa27■■□□□ 1.91
CSNK1D-203ENST00000392334 EIF3AQ14152 1382 aaKnown RBP26.99■■□□□ 1.91
CSNK1D-203ENST00000392334 ADGRB1O14514 1584 aa26.97■■□□□ 1.91
CSNK1D-203ENST00000392334 ALKQ9UM73 1620 aa26.97■■□□□ 1.91
CSNK1D-203ENST00000392334 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
CSNK1D-203ENST00000392334 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
CSNK1D-203ENST00000392334 STK26Q9P289 416 aa26.95■■□□□ 1.91
CSNK1D-203ENST00000392334 SETBP1Q9Y6X0 1596 aa26.95■■□□□ 1.91
CSNK1D-203ENST00000392334 ASXL1Q8IXJ9 1541 aa26.94■■□□□ 1.9
CSNK1D-203ENST00000392334 CCDC184Q52MB2 194 aa26.92■■□□□ 1.9
CSNK1D-203ENST00000392334 ZBED9Q6R2W3 1325 aa26.91■■□□□ 1.9
CSNK1D-203ENST00000392334 SETD1AO15047 1707 aaKnown RBP26.91■■□□□ 1.9
CSNK1D-203ENST00000392334 PLEKHG1Q9ULL1 1385 aa26.9■■□□□ 1.9
CSNK1D-203ENST00000392334 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
CSNK1D-203ENST00000392334 SLC26A8Q96RN1 970 aa26.89■■□□□ 1.9
CSNK1D-203ENST00000392334 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.891e-12■■■■■ 37.9
CSNK1D-203ENST00000392334 METP08581 1390 aa26.87■■□□□ 1.89
CSNK1D-203ENST00000392334 ANKLE2Q86XL3 938 aa26.87■■□□□ 1.89
CSNK1D-203ENST00000392334 ADAMTS13Q76LX8 1427 aa26.87■■□□□ 1.89
CSNK1D-203ENST00000392334 PANK3Q9H999 370 aa26.85■■□□□ 1.89
CSNK1D-203ENST00000392334 MRS2Q9HD23 443 aa26.85■■□□□ 1.89
CSNK1D-203ENST00000392334 PPP4R2Q9NY27 417 aa26.85■■□□□ 1.89
CSNK1D-203ENST00000392334 HSPA2P54652 639 aa26.84■■□□□ 1.89
CSNK1D-203ENST00000392334 YTHDC2Q9H6S0 1430 aaKnown RBP26.83■■□□□ 1.89
CSNK1D-203ENST00000392334 CDCA8Q53HL2 280 aa26.82■■□□□ 1.88
CSNK1D-203ENST00000392334 FANCIQ9NVI1 1328 aa26.82■■□□□ 1.88
CSNK1D-203ENST00000392334 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
CSNK1D-203ENST00000392334 ARHGEF28Q8N1W1 1705 aaKnown RBP26.8■■□□□ 1.88
CSNK1D-203ENST00000392334 MED14O60244 1454 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms