RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
SMARCAL1-203ENST00000392128 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
SMARCAL1-203ENST00000392128 CCER2I3L3R5 266 aa15.9■□□□□ 0.14
SMARCAL1-203ENST00000392128 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 SCAF11Q99590 1463 aaKnown RBP15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 ADGRF5Q8IZF2 1346 aa15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 SPATA31D1Q6ZQQ2 1576 aa15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 TMEM131LA2VDJ0 1609 aa15.89■□□□□ 0.13
SMARCAL1-203ENST00000392128 NEXMIFQ5QGS0 1516 aa15.88■□□□□ 0.13
SMARCAL1-203ENST00000392128 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
SMARCAL1-203ENST00000392128 SETBP1Q9Y6X0 1596 aa15.88■□□□□ 0.13
SMARCAL1-203ENST00000392128 MYO5BQ9ULV0 1848 aa15.88■□□□□ 0.13
SMARCAL1-203ENST00000392128 IDI1Q13907 227 aa15.87■□□□□ 0.13
SMARCAL1-203ENST00000392128 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-203ENST00000392128 TESK2Q96S53 571 aa15.86■□□□□ 0.13
SMARCAL1-203ENST00000392128 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
SMARCAL1-203ENST00000392128 MLECQ14165 292 aa15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 ZFYVE9O95405 1425 aa15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
SMARCAL1-203ENST00000392128 MYO3AQ8NEV4 1616 aa15.82■□□□□ 0.12
SMARCAL1-203ENST00000392128 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
SMARCAL1-203ENST00000392128 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
SMARCAL1-203ENST00000392128 DISP3Q9P2K9 1392 aa15.81■□□□□ 0.12
SMARCAL1-203ENST00000392128 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
SMARCAL1-203ENST00000392128 ADGRB1O14514 1584 aa15.81■□□□□ 0.12
SMARCAL1-203ENST00000392128 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
SMARCAL1-203ENST00000392128 TMF1P82094 1093 aa15.8■□□□□ 0.12
SMARCAL1-203ENST00000392128 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
SMARCAL1-203ENST00000392128 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
SMARCAL1-203ENST00000392128 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
SMARCAL1-203ENST00000392128 A2ML1A8K2U0 1454 aa15.76■□□□□ 0.11
SMARCAL1-203ENST00000392128 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-203ENST00000392128 SBNO2Q9Y2G9 1366 aa15.75■□□□□ 0.11
SMARCAL1-203ENST00000392128 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
SMARCAL1-203ENST00000392128 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
SMARCAL1-203ENST00000392128 STAG3Q9UJ98 1225 aa15.73■□□□□ 0.11
SMARCAL1-203ENST00000392128 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
SMARCAL1-203ENST00000392128 QRICH2Q9H0J4 1663 aa15.72■□□□□ 0.11
SMARCAL1-203ENST00000392128 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
SMARCAL1-203ENST00000392128 TNRQ92752 1358 aa15.72■□□□□ 0.11
SMARCAL1-203ENST00000392128 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
SMARCAL1-203ENST00000392128 MYOM1P52179 1685 aa15.71■□□□□ 0.11
SMARCAL1-203ENST00000392128 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.1
SMARCAL1-203ENST00000392128 C3P01024 1663 aa15.7■□□□□ 0.1
SMARCAL1-203ENST00000392128 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
SMARCAL1-203ENST00000392128 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
SMARCAL1-203ENST00000392128 UBR1Q8IWV7 1749 aa15.69■□□□□ 0.1
SMARCAL1-203ENST00000392128 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
SMARCAL1-203ENST00000392128 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
SMARCAL1-203ENST00000392128 PER1O15534 1290 aaPredicted RBP15.68■□□□□ 0.1
SMARCAL1-203ENST00000392128 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
SMARCAL1-203ENST00000392128 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
SMARCAL1-203ENST00000392128 SETD1AO15047 1707 aaKnown RBP15.67■□□□□ 0.1
SMARCAL1-203ENST00000392128 PANK3Q9H999 370 aa15.66■□□□□ 0.1
SMARCAL1-203ENST00000392128 RALBP1Q15311 655 aa15.65■□□□□ 0.1
SMARCAL1-203ENST00000392128 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
SMARCAL1-203ENST00000392128 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMARCAL1-203ENST00000392128 NRXN3Q9Y4C0 1643 aa15.64■□□□□ 0.09
SMARCAL1-203ENST00000392128 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
SMARCAL1-203ENST00000392128 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
SMARCAL1-203ENST00000392128 YTHDC2Q9H6S0 1430 aaKnown RBP15.63■□□□□ 0.09
SMARCAL1-203ENST00000392128 PTPRMP28827 1452 aa15.62■□□□□ 0.09
SMARCAL1-203ENST00000392128 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
SMARCAL1-203ENST00000392128 TMEM2Q9UHN6 1383 aa15.61■□□□□ 0.09
SMARCAL1-203ENST00000392128 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
SMARCAL1-203ENST00000392128 PUS7Q96PZ0 661 aaKnown RBP15.6■□□□□ 0.09
SMARCAL1-203ENST00000392128 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
SMARCAL1-203ENST00000392128 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
SMARCAL1-203ENST00000392128 TULP4Q9NRJ4 1543 aa15.59■□□□□ 0.09
SMARCAL1-203ENST00000392128 BRD4O60885 1362 aaPredicted RBP15.59■□□□□ 0.09
SMARCAL1-203ENST00000392128 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.09
SMARCAL1-203ENST00000392128 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
SMARCAL1-203ENST00000392128 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
SMARCAL1-203ENST00000392128 RIMS1Q86UR5 1692 aaKnown RBP15.57■□□□□ 0.08
SMARCAL1-203ENST00000392128 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
SMARCAL1-203ENST00000392128 EVC2Q86UK5 1308 aa15.57■□□□□ 0.08
SMARCAL1-203ENST00000392128 LRPPRCP42704 1394 aaKnown RBP15.57■□□□□ 0.08
SMARCAL1-203ENST00000392128 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
SMARCAL1-203ENST00000392128 KNDC1Q76NI1 1749 aa15.56■□□□□ 0.08
SMARCAL1-203ENST00000392128 STK26Q9P289 416 aa15.56■□□□□ 0.08
SMARCAL1-203ENST00000392128 SLIT1O75093 1534 aa15.56■□□□□ 0.08
SMARCAL1-203ENST00000392128 SENP3Q9H4L4 574 aaPredicted RBP15.55■□□□□ 0.08
SMARCAL1-203ENST00000392128 ARHGAP23Q9P227 1491 aa15.55■□□□□ 0.08
SMARCAL1-203ENST00000392128 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
SMARCAL1-203ENST00000392128 NLRP13Q86W25 1043 aa15.55■□□□□ 0.08
SMARCAL1-203ENST00000392128 ABCC11Q96J66 1382 aa15.54■□□□□ 0.08
SMARCAL1-203ENST00000392128 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
SMARCAL1-203ENST00000392128 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
SMARCAL1-203ENST00000392128 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
SMARCAL1-203ENST00000392128 PRAM1Q96QH2 718 aa15.54■□□□□ 0.08
SMARCAL1-203ENST00000392128 PLEKHG1Q9ULL1 1385 aa15.53■□□□□ 0.08
SMARCAL1-203ENST00000392128 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMARCAL1-203ENST00000392128 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
SMARCAL1-203ENST00000392128 METP08581 1390 aa15.52■□□□□ 0.07
SMARCAL1-203ENST00000392128 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.07
SMARCAL1-203ENST00000392128 POGKQ9P215 609 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms