RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
LRRFIP1-204ENST00000392000 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
LRRFIP1-204ENST00000392000 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
LRRFIP1-204ENST00000392000 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
LRRFIP1-204ENST00000392000 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
LRRFIP1-204ENST00000392000 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
LRRFIP1-204ENST00000392000 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
LRRFIP1-204ENST00000392000 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
LRRFIP1-204ENST00000392000 TMEM132EQ6IEE7 984 aa18.72■□□□□ 0.59
LRRFIP1-204ENST00000392000 KDM5DQ9BY66 1539 aa18.71■□□□□ 0.59
LRRFIP1-204ENST00000392000 NUP160Q12769 1436 aa18.71■□□□□ 0.59
LRRFIP1-204ENST00000392000 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
LRRFIP1-204ENST00000392000 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.59
LRRFIP1-204ENST00000392000 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
LRRFIP1-204ENST00000392000 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
LRRFIP1-204ENST00000392000 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
LRRFIP1-204ENST00000392000 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
LRRFIP1-204ENST00000392000 SLC12A5Q9H2X9 1139 aa18.68■□□□□ 0.58
LRRFIP1-204ENST00000392000 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
LRRFIP1-204ENST00000392000 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
LRRFIP1-204ENST00000392000 CARD14Q9BXL6 1004 aa18.68■□□□□ 0.58
LRRFIP1-204ENST00000392000 ABCA8O94911 1581 aa18.68■□□□□ 0.58
LRRFIP1-204ENST00000392000 SHANK2Q9UPX8 1470 aa18.67■□□□□ 0.58
LRRFIP1-204ENST00000392000 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
LRRFIP1-204ENST00000392000 BECN1Q14457 450 aa18.67■□□□□ 0.58
LRRFIP1-204ENST00000392000 GGT6Q6P531 493 aa18.66■□□□□ 0.58
LRRFIP1-204ENST00000392000 MFAP1P55081 439 aaKnown RBP18.66■□□□□ 0.58
LRRFIP1-204ENST00000392000 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
LRRFIP1-204ENST00000392000 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
LRRFIP1-204ENST00000392000 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
LRRFIP1-204ENST00000392000 CENPJQ9HC77 1338 aaPredicted RBP18.65■□□□□ 0.58
LRRFIP1-204ENST00000392000 FOXD4L1Q9NU39 408 aa18.65■□□□□ 0.58
LRRFIP1-204ENST00000392000 NAP1L5Q96NT1 182 aaPredicted RBP18.64■□□□□ 0.57
LRRFIP1-204ENST00000392000 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
LRRFIP1-204ENST00000392000 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
LRRFIP1-204ENST00000392000 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
LRRFIP1-204ENST00000392000 STK26Q9P289 416 aa18.6■□□□□ 0.57
LRRFIP1-204ENST00000392000 ADCY10Q96PN6 1610 aa18.59■□□□□ 0.57
LRRFIP1-204ENST00000392000 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
LRRFIP1-204ENST00000392000 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
LRRFIP1-204ENST00000392000 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
LRRFIP1-204ENST00000392000 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.57
LRRFIP1-204ENST00000392000 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
LRRFIP1-204ENST00000392000 WWC1Q8IX03 1113 aa18.57■□□□□ 0.56
LRRFIP1-204ENST00000392000 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
LRRFIP1-204ENST00000392000 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
LRRFIP1-204ENST00000392000 E9PSI1 815 aa18.57■□□□□ 0.56
LRRFIP1-204ENST00000392000 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 PANK2Q9BZ23 570 aa18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 PDZRN3Q9UPQ7 1066 aa18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 RLBP1P12271 317 aa18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 MTHFSP49914 203 aa18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
LRRFIP1-204ENST00000392000 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
LRRFIP1-204ENST00000392000 RRAGDQ9NQL2 400 aaPredicted RBP18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 E9PCH4 1651 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 TBC1D2Q9BYX2 928 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
LRRFIP1-204ENST00000392000 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
LRRFIP1-204ENST00000392000 FBLN1P23142 703 aa18.49■□□□□ 0.55
LRRFIP1-204ENST00000392000 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
LRRFIP1-204ENST00000392000 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
LRRFIP1-204ENST00000392000 KANK1Q14678 1352 aa18.48■□□□□ 0.55
LRRFIP1-204ENST00000392000 USP19O94966 1318 aa18.47■□□□□ 0.55
LRRFIP1-204ENST00000392000 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
LRRFIP1-204ENST00000392000 CFAP65Q6ZU64 1925 aaKnown RBP18.47■□□□□ 0.55
LRRFIP1-204ENST00000392000 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
LRRFIP1-204ENST00000392000 SMC4Q9NTJ3 1288 aa18.47■□□□□ 0.55
LRRFIP1-204ENST00000392000 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
LRRFIP1-204ENST00000392000 ASXL1Q8IXJ9 1541 aa18.46■□□□□ 0.55
LRRFIP1-204ENST00000392000 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
LRRFIP1-204ENST00000392000 MAPK8IP3Q9UPT6 1336 aa18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 ELL2O00472 640 aaPredicted RBP18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 PLCH2O75038 1416 aa18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
LRRFIP1-204ENST00000392000 TRMT2AQ8IZ69 625 aaKnown RBP18.44■□□□□ 0.54
LRRFIP1-204ENST00000392000 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
LRRFIP1-204ENST00000392000 DUOX2Q9NRD8 1548 aa18.44■□□□□ 0.54
LRRFIP1-204ENST00000392000 FAM43AQ8N2R8 423 aa18.44■□□□□ 0.54
LRRFIP1-204ENST00000392000 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
LRRFIP1-204ENST00000392000 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
LRRFIP1-204ENST00000392000 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
LRRFIP1-204ENST00000392000 ARID3AQ99856 593 aa18.43■□□□□ 0.54
LRRFIP1-204ENST00000392000 ATP10AO60312 1499 aa18.43■□□□□ 0.54
LRRFIP1-204ENST00000392000 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
LRRFIP1-204ENST00000392000 XRCC6P12956 609 aaKnown RBP eCLIP18.42■□□□□ 0.54
LRRFIP1-204ENST00000392000 TPRNQ4KMQ1 711 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms