RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 NOS1P29475 1434 aa22.77■■□□□ 1.24
RPL13A-201ENST00000391857 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
RPL13A-201ENST00000391857 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
RPL13A-201ENST00000391857 ABCC5O15440 1437 aa22.76■■□□□ 1.23
RPL13A-201ENST00000391857 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
RPL13A-201ENST00000391857 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
RPL13A-201ENST00000391857 TBX22Q9Y458 520 aa22.72■■□□□ 1.23
RPL13A-201ENST00000391857 PLEKHG1Q9ULL1 1385 aa22.72■■□□□ 1.23
RPL13A-201ENST00000391857 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
RPL13A-201ENST00000391857 CADPS2Q86UW7 1296 aa22.7■■□□□ 1.22
RPL13A-201ENST00000391857 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
RPL13A-201ENST00000391857 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
RPL13A-201ENST00000391857 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
RPL13A-201ENST00000391857 CDK12Q9NYV4 1490 aaPredicted RBP22.68■■□□□ 1.22
RPL13A-201ENST00000391857 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
RPL13A-201ENST00000391857 VPS8Q8N3P4 1428 aa22.67■■□□□ 1.22
RPL13A-201ENST00000391857 NUTM2BA6NNL0 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-201ENST00000391857 NUTM2EB1AL46 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-201ENST00000391857 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-201ENST00000391857 ATF3P18847 181 aa22.66■■□□□ 1.22
RPL13A-201ENST00000391857 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
RPL13A-201ENST00000391857 AHDC1Q5TGY3 1603 aaPredicted RBP22.65■■□□□ 1.22
RPL13A-201ENST00000391857 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
RPL13A-201ENST00000391857 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
RPL13A-201ENST00000391857 DAPK1P53355 1430 aa22.65■■□□□ 1.22
RPL13A-201ENST00000391857 RIMS2Q9UQ26 1411 aa22.65■■□□□ 1.22
RPL13A-201ENST00000391857 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
RPL13A-201ENST00000391857 AFF2P51816 1311 aa22.63■■□□□ 1.21
RPL13A-201ENST00000391857 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
RPL13A-201ENST00000391857 SHPRHQ149N8 1683 aa22.61■■□□□ 1.21
RPL13A-201ENST00000391857 ADAMTS13Q76LX8 1427 aa22.6■■□□□ 1.21
RPL13A-201ENST00000391857 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
RPL13A-201ENST00000391857 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
RPL13A-201ENST00000391857 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
RPL13A-201ENST00000391857 QTRT2Q9H974 415 aaKnown RBP22.57■■□□□ 1.2
RPL13A-201ENST00000391857 PIK3R4Q99570 1358 aa22.57■■□□□ 1.2
RPL13A-201ENST00000391857 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
RPL13A-201ENST00000391857 RPRD2Q5VT52 1461 aaKnown RBP22.56■■□□□ 1.2
RPL13A-201ENST00000391857 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
RPL13A-201ENST00000391857 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.56■■□□□ 1.2
RPL13A-201ENST00000391857 RGS12O14924 1447 aa22.56■■□□□ 1.2
RPL13A-201ENST00000391857 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
RPL13A-201ENST00000391857 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
RPL13A-201ENST00000391857 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
RPL13A-201ENST00000391857 CHGAP10645 457 aaKnown RBP22.53■■□□□ 1.2
RPL13A-201ENST00000391857 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
RPL13A-201ENST00000391857 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
RPL13A-201ENST00000391857 TMEM131LA2VDJ0 1609 aa22.51■■□□□ 1.19
RPL13A-201ENST00000391857 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
RPL13A-201ENST00000391857 DCCP43146 1447 aa22.48■■□□□ 1.19
RPL13A-201ENST00000391857 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
RPL13A-201ENST00000391857 DDX17Q92841 729 aaKnown RBP22.46■■□□□ 1.19
RPL13A-201ENST00000391857 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
RPL13A-201ENST00000391857 MST1RQ04912 1400 aa22.46■■□□□ 1.19
RPL13A-201ENST00000391857 MYO5BQ9ULV0 1848 aa22.45■■□□□ 1.19
RPL13A-201ENST00000391857 SRCAPQ6ZRS2 3230 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 ANKRD50Q9ULJ7 1429 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 ADGRL2O95490 1459 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 GCC2Q8IWJ2 1684 aa22.45■■□□□ 1.18
RPL13A-201ENST00000391857 ATAD2Q6PL18 1390 aa22.42■■□□□ 1.18
RPL13A-201ENST00000391857 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
RPL13A-201ENST00000391857 TRPM2O94759 1503 aa22.41■■□□□ 1.18
RPL13A-201ENST00000391857 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
RPL13A-201ENST00000391857 APLP2Q06481 763 aa22.38■■□□□ 1.17
RPL13A-201ENST00000391857 FOXD1Q16676 465 aa22.38■■□□□ 1.17
RPL13A-201ENST00000391857 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
RPL13A-201ENST00000391857 USP21Q9UK80 565 aa22.36■■□□□ 1.17
RPL13A-201ENST00000391857 TRPC5Q9UL62 973 aaPredicted RBP22.36■■□□□ 1.17
RPL13A-201ENST00000391857 FNBP4Q8N3X1 1017 aaPredicted RBP22.34■■□□□ 1.17
RPL13A-201ENST00000391857 METP08581 1390 aa22.34■■□□□ 1.17
RPL13A-201ENST00000391857 UNC13BO14795 1591 aa22.33■■□□□ 1.16
RPL13A-201ENST00000391857 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
RPL13A-201ENST00000391857 ADGRL3Q9HAR2 1447 aa22.31■■□□□ 1.16
RPL13A-201ENST00000391857 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
RPL13A-201ENST00000391857 CCDC125Q86Z20 511 aa22.31■■□□□ 1.16
RPL13A-201ENST00000391857 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
RPL13A-201ENST00000391857 SOS2Q07890 1332 aaPredicted RBP22.31■■□□□ 1.16
RPL13A-201ENST00000391857 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
RPL13A-201ENST00000391857 ATRNO75882 1429 aa22.28■■□□□ 1.16
RPL13A-201ENST00000391857 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
RPL13A-201ENST00000391857 NRXN3Q9Y4C0 1643 aa22.27■■□□□ 1.16
RPL13A-201ENST00000391857 E9PCH4 1651 aa22.26■■□□□ 1.15
RPL13A-201ENST00000391857 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
RPL13A-201ENST00000391857 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
RPL13A-201ENST00000391857 NUP155O75694 1391 aa22.22■■□□□ 1.15
RPL13A-201ENST00000391857 GJD4Q96KN9 370 aaPredicted RBP22.19■■□□□ 1.14
RPL13A-201ENST00000391857 BCL9LQ86UU0 1499 aa22.19■■□□□ 1.14
RPL13A-201ENST00000391857 LAMC1P11047 1609 aa22.19■■□□□ 1.14
RPL13A-201ENST00000391857 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
RPL13A-201ENST00000391857 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
RPL13A-201ENST00000391857 NALCNQ8IZF0 1738 aa22.15■■□□□ 1.14
RPL13A-201ENST00000391857 MYOM2P54296 1465 aa22.15■■□□□ 1.14
RPL13A-201ENST00000391857 ROBO2Q9HCK4 1378 aa22.14■■□□□ 1.14
RPL13A-201ENST00000391857 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
RPL13A-201ENST00000391857 BLMP54132 1417 aaPredicted RBP22.12■■□□□ 1.13
RPL13A-201ENST00000391857 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
RPL13A-201ENST00000391857 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
RPL13A-201ENST00000391857 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms