RNA–Protein interactions for RNA: ENST00000391249.2

U3.28-201, humanhuman

BASIC

Gene U3, Length 210 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.28-201ENST00000391249 OATP04181 439 aa9.94□□□□□ -0.82
U3.28-201ENST00000391249 NECTIN2Q92692 538 aa9.94□□□□□ -0.82
U3.28-201ENST00000391249 SHROOM4Q9ULL8 1493 aa9.93□□□□□ -0.82
U3.28-201ENST00000391249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.93□□□□□ -0.82
U3.28-201ENST00000391249 METTL3Q86U44 580 aaKnown RBP9.93□□□□□ -0.82
U3.28-201ENST00000391249 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
U3.28-201ENST00000391249 MTRQ99707 1265 aa9.93□□□□□ -0.82
U3.28-201ENST00000391249 RGS20O76081 388 aa9.92□□□□□ -0.82
U3.28-201ENST00000391249 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
U3.28-201ENST00000391249 IL21Q9HBE4 155 aa9.9□□□□□ -0.82
U3.28-201ENST00000391249 DCAF1Q9Y4B6 1507 aa9.9□□□□□ -0.82
U3.28-201ENST00000391249 SLC10A3P09131 477 aa9.88□□□□□ -0.83
U3.28-201ENST00000391249 ZNF516Q92618 1163 aa9.88□□□□□ -0.83
U3.28-201ENST00000391249 PHOX2BQ99453 314 aa9.87□□□□□ -0.83
U3.28-201ENST00000391249 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
U3.28-201ENST00000391249 PRR14Q9BWN1 585 aa9.86□□□□□ -0.83
U3.28-201ENST00000391249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
U3.28-201ENST00000391249 COPS2P61201 443 aa9.84□□□□□ -0.83
U3.28-201ENST00000391249 ACTN4O43707 911 aaKnown RBP9.83□□□□□ -0.84
U3.28-201ENST00000391249 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
U3.28-201ENST00000391249 CFHP08603 1231 aa9.82□□□□□ -0.84
U3.28-201ENST00000391249 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
U3.28-201ENST00000391249 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
U3.28-201ENST00000391249 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
U3.28-201ENST00000391249 ZPR1O75312 459 aa9.81□□□□□ -0.84
U3.28-201ENST00000391249 MAP2K5Q13163 448 aa9.8□□□□□ -0.84
U3.28-201ENST00000391249 KMT5BQ4FZB7 885 aa9.8□□□□□ -0.84
U3.28-201ENST00000391249 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
U3.28-201ENST00000391249 BLOC1S3Q6QNY0 202 aa9.8□□□□□ -0.84
U3.28-201ENST00000391249 IRF6O14896 467 aa9.79□□□□□ -0.84
U3.28-201ENST00000391249 RSPH4AQ5TD94 716 aa9.77□□□□□ -0.85
U3.28-201ENST00000391249 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
U3.28-201ENST00000391249 LMOD2Q6P5Q4 547 aa9.76□□□□□ -0.85
U3.28-201ENST00000391249 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
U3.28-201ENST00000391249 DDX11L8A8MPP1 907 aa9.75□□□□□ -0.85
U3.28-201ENST00000391249 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
U3.28-201ENST00000391249 RDH13Q8NBN7 331 aa9.73□□□□□ -0.85
U3.28-201ENST00000391249 TLL1O43897 1013 aa9.72□□□□□ -0.85
U3.28-201ENST00000391249 GCGRP47871 477 aa9.72□□□□□ -0.85
U3.28-201ENST00000391249 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
U3.28-201ENST00000391249 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
U3.28-201ENST00000391249 NR1I2O75469 434 aa9.71□□□□□ -0.86
U3.28-201ENST00000391249 PUS10Q3MIT2 529 aaKnown RBP9.71□□□□□ -0.86
U3.28-201ENST00000391249 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.86
U3.28-201ENST00000391249 IRX2Q9BZI1 471 aaPredicted RBP9.7□□□□□ -0.86
U3.28-201ENST00000391249 ZMYND10O75800 440 aa9.69□□□□□ -0.86
U3.28-201ENST00000391249 GGCXP38435 758 aa9.69□□□□□ -0.86
U3.28-201ENST00000391249 FUT2Q10981 343 aa9.69□□□□□ -0.86
U3.28-201ENST00000391249 MYO15BQ96JP2 1530 aa9.68□□□□□ -0.86
U3.28-201ENST00000391249 CD46P15529 392 aa9.68□□□□□ -0.86
U3.28-201ENST00000391249 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
U3.28-201ENST00000391249 MORN1Q5T089 497 aa9.68□□□□□ -0.86
U3.28-201ENST00000391249 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
U3.28-201ENST00000391249 ZC3H15Q8WU90 426 aaKnown RBP9.68□□□□□ -0.86
U3.28-201ENST00000391249 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
U3.28-201ENST00000391249 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
U3.28-201ENST00000391249 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
U3.28-201ENST00000391249 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
U3.28-201ENST00000391249 ADH1BP00325 375 aa9.66□□□□□ -0.86
U3.28-201ENST00000391249 SCRIBQ14160 1630 aa9.66□□□□□ -0.86
U3.28-201ENST00000391249 S1PR4O95977 384 aa9.65□□□□□ -0.86
U3.28-201ENST00000391249 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
U3.28-201ENST00000391249 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
U3.28-201ENST00000391249 EMID1Q96A84 441 aaPredicted RBP9.64□□□□□ -0.87
U3.28-201ENST00000391249 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
U3.28-201ENST00000391249 NACADO15069 1562 aa9.63□□□□□ -0.87
U3.28-201ENST00000391249 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
U3.28-201ENST00000391249 SPSB2Q99619 263 aa9.63□□□□□ -0.87
U3.28-201ENST00000391249 GPCPD1Q9NPB8 672 aa9.63□□□□□ -0.87
U3.28-201ENST00000391249 PPEF1O14829 653 aaPredicted RBP9.62□□□□□ -0.87
U3.28-201ENST00000391249 CLCN1P35523 988 aa9.62□□□□□ -0.87
U3.28-201ENST00000391249 ANKLE1Q8NAG6 615 aa9.62□□□□□ -0.87
U3.28-201ENST00000391249 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
U3.28-201ENST00000391249 SLC6A16Q9GZN6 736 aa9.62□□□□□ -0.87
U3.28-201ENST00000391249 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
U3.28-201ENST00000391249 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
U3.28-201ENST00000391249 ABCC9O60706 1549 aa9.61□□□□□ -0.87
U3.28-201ENST00000391249 BRICD5Q6PL45 260 aa9.6□□□□□ -0.87
U3.28-201ENST00000391249 KDM4AO75164 1064 aa9.59□□□□□ -0.87
U3.28-201ENST00000391249 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
U3.28-201ENST00000391249 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
U3.28-201ENST00000391249 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
U3.28-201ENST00000391249 SLC19A1P41440 591 aa9.57□□□□□ -0.88
U3.28-201ENST00000391249 AMHR2Q16671 573 aa9.57□□□□□ -0.88
U3.28-201ENST00000391249 LIAT1Q6ZQX7 453 aa9.57□□□□□ -0.88
U3.28-201ENST00000391249 GFRA3O60609 400 aa9.56□□□□□ -0.88
U3.28-201ENST00000391249 PLA2G2CQ5R387 149 aa9.56□□□□□ -0.88
U3.28-201ENST00000391249 RNF19BQ6ZMZ0 732 aa9.56□□□□□ -0.88
U3.28-201ENST00000391249 USP46P62068 366 aa9.55□□□□□ -0.88
U3.28-201ENST00000391249 LAPTM4AQ15012 233 aa9.55□□□□□ -0.88
U3.28-201ENST00000391249 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
U3.28-201ENST00000391249 UNC13AQ9UPW8 1703 aa9.54□□□□□ -0.88
U3.28-201ENST00000391249 HOXA2O43364 376 aa9.54□□□□□ -0.88
U3.28-201ENST00000391249 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
U3.28-201ENST00000391249 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
U3.28-201ENST00000391249 HLA-CQ95604 372 aa9.54□□□□□ -0.88
U3.28-201ENST00000391249 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
U3.28-201ENST00000391249 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
U3.28-201ENST00000391249 NRG2O14511 850 aaPredicted RBP9.52□□□□□ -0.89
U3.28-201ENST00000391249 Q3C1V9 767 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms