RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 VRTNQ9H8Y1 702 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 NDUFB9Q9Y6M9 179 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 IVNS1ABPQ9Y6Y0 642 aa2.66□□□□□ -1.98
TRAJ39-201ENST00000390498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 LILRB3O75022 631 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 AP1G2O75843 785 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 ATG7O95352 703 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 USP17L8P0C7I0 530 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 RFX1P22670 979 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 TSR1Q2NL82 804 aaKnown RBP2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 FAM161AQ3B820 660 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 PRPF38BQ5VTL8 546 aaKnown RBP2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 B4GALNT3Q6L9W6 998 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 PADI6Q6TGC4 694 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 TMEM92Q6UXU6 159 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 NUTM1Q86Y26 1132 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 SULF1Q8IWU6 871 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 RBM46Q8TBY0 533 aaKnown RBP2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 NLRP7Q8WX94 980 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 MYT1LQ9UL68 1186 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 GNEQ9Y223 722 aaKnown RBP2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 PCDHGA10Q9Y5H3 936 aa2.65□□□□□ -1.99
TRAJ39-201ENST00000390498 RBM47A0AV96 593 aaKnown RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 PALM3A6NDB9 673 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 NUTM2BA6NNL0 878 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 NUTM2EB1AL46 878 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 HSP90B1P14625 803 aaKnown RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 CD46P15529 392 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 ERCC3P19447 782 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 SOX11P35716 441 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 CLCN6P51797 869 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 QPCTQ16769 361 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 RSPH4AQ5TD94 716 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 NUTM2DQ5VT03 806 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 NUTM2AQ8IVF1 878 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 ADAMTS19Q8TE59 1207 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 JPH4Q96JJ6 628 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 GJD4Q96KN9 370 aaPredicted RBP2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 ALG2Q9H553 416 aa2.64□□□□□ -1.99
TRAJ39-201ENST00000390498 MOXD2PA6NHM9 499 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 C19orf67A6NJJ6 358 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 TMEM88BA6NKF7 163 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 PLCG2P16885 1265 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 LMOD1P29536 600 aaPredicted RBP2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 CSPP1Q1MSJ5 1256 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 RTL5Q5HYW3 569 aaPredicted RBP2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 C6orf132Q5T0Z8 1188 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 CHRDL2Q6WN34 429 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 PUS7Q96PZ0 661 aaKnown RBP2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 ZBTB3Q9H5J0 574 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 IGSF5Q9NSI5 407 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 USP35Q9P2H5 1018 aa2.63□□□□□ -1.99
TRAJ39-201ENST00000390498 RCCD1A6NED2 376 aa2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 ATN1P54259 1190 aaPredicted RBP2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 PRSS12P56730 875 aa2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 ELOAQ14241 798 aaKnown RBP2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 CCER1Q8TC90 406 aaPredicted RBP2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 TFIP11Q9UBB9 837 aaKnown RBP2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 PCDHB15Q9Y5E8 787 aa2.62□□□□□ -1.99
TRAJ39-201ENST00000390498 CARNS1A5YM72 827 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 UNCXA6NJT0 531 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 ATMINO43313 823 aaPredicted RBP2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 GALR2O43603 387 aaPredicted RBP2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 GPR37L1O60883 481 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 NDUFV2P19404 249 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 CDK11BP21127 795 aaKnown RBP2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 FOSBP53539 338 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 USP46P62068 366 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 VAC14Q08AM6 782 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 TXNDC2Q86VQ3 553 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 PNMA1Q8ND90 353 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 ZDHHC16Q969W1 377 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 CDCA7LQ96GN5 454 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 EYA1Q99502 592 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 TRIM34Q9BYJ4 488 aa2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 CDK11AQ9UQ88 783 aaPredicted RBP2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 MAFBQ9Y5Q3 323 aaPredicted RBP2.61□□□□□ -1.99
TRAJ39-201ENST00000390498 KDM4FA0A1W2PPD8 638 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 DDX11L8A8MPP1 907 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 ATP9BO43861 1147 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 KDM4AO75164 1064 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 DNAJB2P25686 324 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 SEMA3FQ13275 785 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 ASTLQ6HA08 431 aaPredicted RBP2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 HELBQ8NG08 1087 aaPredicted RBP2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 PRR7Q8TB68 274 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 CABLES1Q8TDN4 633 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 SIRT1Q96EB6 747 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 UCN2Q96RP3 112 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 HMX1Q9NP08 348 aaPredicted RBP2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 PCDHGA4Q9Y5G9 962 aa2.6□□□□□ -1.99
TRAJ39-201ENST00000390498 HOXA2O43364 376 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 FDX1P10109 184 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 ARID4AP29374 1257 aaPredicted RBP2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 EIF4G2P78344 907 aaKnown RBP eCLIP2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 CTDSPL2Q05D32 466 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 CDCA8Q53HL2 280 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 DNAJC14Q6Y2X3 702 aaPredicted RBP2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 TBC1D9Q6ZT07 1266 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 ZNF454Q8N9F8 522 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms