RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 NOS1P29475 1434 aa24.91■■□□□ 1.58
ACTN4-202ENST00000390009 PPLO60437 1756 aa24.9■■□□□ 1.58
ACTN4-202ENST00000390009 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
ACTN4-202ENST00000390009 NRXN1Q9ULB1 1477 aa24.9■■□□□ 1.58
ACTN4-202ENST00000390009 KIF13AQ9H1H9 1805 aa24.9■■□□□ 1.58
ACTN4-202ENST00000390009 ARHGAP31Q2M1Z3 1444 aa24.89■■□□□ 1.57
ACTN4-202ENST00000390009 PIK3C2BO00750 1634 aa24.88■■□□□ 1.57
ACTN4-202ENST00000390009 CHGAP10645 457 aaKnown RBP24.88■■□□□ 1.57
ACTN4-202ENST00000390009 FAM9BQ8IZU0 186 aa24.88■■□□□ 1.57
ACTN4-202ENST00000390009 SYNMO15061 1565 aa24.88■■□□□ 1.57
ACTN4-202ENST00000390009 CFAP70Q5T0N1 1121 aa24.86■■□□□ 1.57
ACTN4-202ENST00000390009 KTN1Q86UP2 1357 aaKnown RBP24.85■■□□□ 1.57
ACTN4-202ENST00000390009 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
ACTN4-202ENST00000390009 REREQ9P2R6 1566 aa24.83■■□□□ 1.57
ACTN4-202ENST00000390009 PER1O15534 1290 aaPredicted RBP24.81■■□□□ 1.56
ACTN4-202ENST00000390009 RALBP1Q15311 655 aa24.81■■□□□ 1.56
ACTN4-202ENST00000390009 SUPT16HQ9Y5B9 1047 aaKnown RBP24.81■■□□□ 1.56
ACTN4-202ENST00000390009 PREX1Q8TCU6 1659 aa24.8■■□□□ 1.56
ACTN4-202ENST00000390009 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
ACTN4-202ENST00000390009 SETBP1Q9Y6X0 1596 aa24.79■■□□□ 1.56
ACTN4-202ENST00000390009 PIK3C2GO75747 1445 aa24.79■■□□□ 1.56
ACTN4-202ENST00000390009 MYBBP1AQ9BQG0 1328 aaKnown RBP24.78■■□□□ 1.56
ACTN4-202ENST00000390009 AGLP35573 1532 aa24.77■■□□□ 1.56
ACTN4-202ENST00000390009 PANK3Q9H999 370 aa24.77■■□□□ 1.56
ACTN4-202ENST00000390009 CDCA8Q53HL2 280 aa24.76■■□□□ 1.55
ACTN4-202ENST00000390009 PARD3Q8TEW0 1356 aa24.75■■□□□ 1.55
ACTN4-202ENST00000390009 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
ACTN4-202ENST00000390009 NEXMIFQ5QGS0 1516 aa24.74■■□□□ 1.55
ACTN4-202ENST00000390009 TMC1Q8TDI8 760 aa24.74■■□□□ 1.55
ACTN4-202ENST00000390009 BRD4O60885 1362 aaPredicted RBP24.74■■□□□ 1.55
ACTN4-202ENST00000390009 KDM5AP29375 1690 aaKnown RBP24.74■■□□□ 1.55
ACTN4-202ENST00000390009 MYO5BQ9ULV0 1848 aa24.73■■□□□ 1.55
ACTN4-202ENST00000390009 IDI1Q13907 227 aa24.72■■□□□ 1.55
ACTN4-202ENST00000390009 C14orf93Q9H972 538 aaKnown RBP24.72■■□□□ 1.55
ACTN4-202ENST00000390009 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
ACTN4-202ENST00000390009 MYOM1P52179 1685 aa24.72■■□□□ 1.55
ACTN4-202ENST00000390009 ZBED9Q6R2W3 1325 aa24.72■■□□□ 1.55
ACTN4-202ENST00000390009 PNISRQ8TF01 805 aaKnown RBP24.7■■□□□ 1.54
ACTN4-202ENST00000390009 ARHGEF40Q8TER5 1519 aa24.7■■□□□ 1.54
ACTN4-202ENST00000390009 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
ACTN4-202ENST00000390009 SLC24A1O60721 1099 aa24.7■■□□□ 1.54
ACTN4-202ENST00000390009 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
ACTN4-202ENST00000390009 TMEM131LA2VDJ0 1609 aa24.68■■□□□ 1.54
ACTN4-202ENST00000390009 PPP6R1Q9UPN7 881 aa24.68■■□□□ 1.54
ACTN4-202ENST00000390009 ERVK-7P63135 1459 aa24.68■■□□□ 1.54
ACTN4-202ENST00000390009 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
ACTN4-202ENST00000390009 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
ACTN4-202ENST00000390009 NLRP13Q86W25 1043 aa24.66■■□□□ 1.54
ACTN4-202ENST00000390009 SBNO2Q9Y2G9 1366 aa24.66■■□□□ 1.54
ACTN4-202ENST00000390009 FKBP8Q14318 412 aa24.64■■□□□ 1.53
ACTN4-202ENST00000390009 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.53
ACTN4-202ENST00000390009 FBXO31Q5XUX0 539 aaPredicted RBP24.64■■□□□ 1.53
ACTN4-202ENST00000390009 QRICH2Q9H0J4 1663 aa24.63■■□□□ 1.53
ACTN4-202ENST00000390009 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
ACTN4-202ENST00000390009 NEFLP07196 543 aa24.63■■□□□ 1.53
ACTN4-202ENST00000390009 ZFYVE9O95405 1425 aa24.62■■□□□ 1.53
ACTN4-202ENST00000390009 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
ACTN4-202ENST00000390009 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
ACTN4-202ENST00000390009 TMEM132EQ6IEE7 984 aa24.61■■□□□ 1.53
ACTN4-202ENST00000390009 KNSTRNQ9Y448 316 aa24.61■■□□□ 1.53
ACTN4-202ENST00000390009 MYT1Q01538 1121 aa24.58■■□□□ 1.52
ACTN4-202ENST00000390009 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
ACTN4-202ENST00000390009 MLECQ14165 292 aa24.57■■□□□ 1.52
ACTN4-202ENST00000390009 SPATA31D1Q6ZQQ2 1576 aa24.57■■□□□ 1.52
ACTN4-202ENST00000390009 ASXL1Q8IXJ9 1541 aa24.57■■□□□ 1.52
ACTN4-202ENST00000390009 AMER1Q5JTC6 1135 aaPredicted RBP24.55■■□□□ 1.52
ACTN4-202ENST00000390009 NPC1L1Q9UHC9 1359 aa24.51■■□□□ 1.51
ACTN4-202ENST00000390009 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
ACTN4-202ENST00000390009 BCANQ96GW7 911 aa24.49■■□□□ 1.51
ACTN4-202ENST00000390009 A2ML1A8K2U0 1454 aa24.46■■□□□ 1.51
ACTN4-202ENST00000390009 SMG6Q86US8 1419 aaKnown RBP24.46■■□□□ 1.51
ACTN4-202ENST00000390009 PPP2R1AP30153 589 aa24.45■■□□□ 1.5
ACTN4-202ENST00000390009 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
ACTN4-202ENST00000390009 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
ACTN4-202ENST00000390009 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
ACTN4-202ENST00000390009 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
ACTN4-202ENST00000390009 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
ACTN4-202ENST00000390009 CARD14Q9BXL6 1004 aa24.43■■□□□ 1.5
ACTN4-202ENST00000390009 TULP4Q9NRJ4 1543 aa24.43■■□□□ 1.5
ACTN4-202ENST00000390009 INSRP06213 1382 aa24.42■■□□□ 1.5
ACTN4-202ENST00000390009 NUDCQ9Y266 331 aa24.41■■□□□ 1.5
ACTN4-202ENST00000390009 EVC2Q86UK5 1308 aa24.4■■□□□ 1.5
ACTN4-202ENST00000390009 STK26Q9P289 416 aa24.4■■□□□ 1.5
ACTN4-202ENST00000390009 BLMP54132 1417 aaPredicted RBP24.39■■□□□ 1.5
ACTN4-202ENST00000390009 PTPRMP28827 1452 aa24.39■■□□□ 1.5
ACTN4-202ENST00000390009 YTHDC2Q9H6S0 1430 aaKnown RBP24.39■■□□□ 1.49
ACTN4-202ENST00000390009 PUS7Q96PZ0 661 aaKnown RBP24.38■■□□□ 1.49
ACTN4-202ENST00000390009 RIMS2Q9UQ26 1411 aa24.38■■□□□ 1.49
ACTN4-202ENST00000390009 SLC12A5Q9H2X9 1139 aa24.37■■□□□ 1.49
ACTN4-202ENST00000390009 IRX6P78412 446 aaPredicted RBP24.36■■□□□ 1.49
ACTN4-202ENST00000390009 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.492e-6■■□□□ 14.4
ACTN4-202ENST00000390009 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
ACTN4-202ENST00000390009 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
ACTN4-202ENST00000390009 USP32Q8NFA0 1604 aa24.33■■□□□ 1.49
ACTN4-202ENST00000390009 TNRQ92752 1358 aa24.31■■□□□ 1.48
ACTN4-202ENST00000390009 PRAM1Q96QH2 718 aa24.31■■□□□ 1.48
ACTN4-202ENST00000390009 CABP2Q9NPB3 220 aa24.31■■□□□ 1.48
ACTN4-202ENST00000390009 ADAMTS8Q9UP79 889 aa24.31■■□□□ 1.48
ACTN4-202ENST00000390009 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
ACTN4-202ENST00000390009 WDR43Q15061 677 aaKnown RBP eCLIP24.29■■□□□ 1.483e-7■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms