RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 SF3A1Q15459 793 aaKnown RBP22.54■■□□□ 1.2
SSC5D-201ENST00000389623 RIPK4P57078 832 aa22.53■■□□□ 1.2
SSC5D-201ENST00000389623 NASPP49321 788 aaPredicted RBP22.53■■□□□ 1.2
SSC5D-201ENST00000389623 BECN2A8MW95 431 aa22.52■■□□□ 1.2
SSC5D-201ENST00000389623 MCTP1Q6DN14 999 aa22.52■■□□□ 1.2
SSC5D-201ENST00000389623 GORABQ5T7V8 394 aa22.51■■□□□ 1.19
SSC5D-201ENST00000389623 GOLGA6L1Q8N7Z2 621 aa22.5■■□□□ 1.19
SSC5D-201ENST00000389623 DIAPH1O60610 1272 aaKnown RBP22.5■■□□□ 1.19
SSC5D-201ENST00000389623 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SSC5D-201ENST00000389623 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
SSC5D-201ENST00000389623 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
SSC5D-201ENST00000389623 INTS3Q68E01 1043 aaKnown RBP22.49■■□□□ 1.19
SSC5D-201ENST00000389623 H3BQV1 296 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 PDE3AQ14432 1141 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 IFFO2Q5TF58 517 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 AMPHP49418 695 aa22.48■■□□□ 1.19
SSC5D-201ENST00000389623 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
SSC5D-201ENST00000389623 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 NPHP1O15259 732 aa22.47■■□□□ 1.19
SSC5D-201ENST00000389623 CHMP3Q9Y3E7 222 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 FAM184AQ8NB25 1140 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 DIAPH3Q9NSV4 1193 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 PDZRN3Q9UPQ7 1066 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 R3HCC1Q9Y3T6 440 aaKnown RBP22.46■■□□□ 1.19
SSC5D-201ENST00000389623 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
SSC5D-201ENST00000389623 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 MAP7D2Q96T17 732 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
SSC5D-201ENST00000389623 PPP2R1AP30153 589 aa22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF771Q7L3S4 317 aaPredicted RBP22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF592Q92610 1267 aa22.44■■□□□ 1.18
SSC5D-201ENST00000389623 ZKSCAN1P17029 563 aaPredicted RBP22.43■■□□□ 1.18
SSC5D-201ENST00000389623 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 RUFY2Q8WXA3 655 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 CDC45O75419 566 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 COG3Q96JB2 828 aa22.43■■□□□ 1.18
SSC5D-201ENST00000389623 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
SSC5D-201ENST00000389623 ROCK1Q13464 1354 aa22.42■■□□□ 1.18
SSC5D-201ENST00000389623 MTERF4Q7Z6M4 381 aaKnown RBP22.41■■□□□ 1.18
SSC5D-201ENST00000389623 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
SSC5D-201ENST00000389623 TPM2P07951 284 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 TPM3P06753 285 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 MINK1Q8N4C8 1332 aaPredicted RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 CHMP4CQ96CF2 233 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 RNF214Q8ND24 703 aa22.4■■□□□ 1.18
SSC5D-201ENST00000389623 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
SSC5D-201ENST00000389623 HFM1A2PYH4 1435 aa22.39■■□□□ 1.18
SSC5D-201ENST00000389623 GNAI1P63096 354 aa22.39■■□□□ 1.18
SSC5D-201ENST00000389623 CCDC39Q9UFE4 941 aa22.39■■□□□ 1.17
SSC5D-201ENST00000389623 BCAR3O75815 825 aa22.39■■□□□ 1.17
SSC5D-201ENST00000389623 CAVIN1Q6NZI2 390 aaKnown RBP22.38■■□□□ 1.17
SSC5D-201ENST00000389623 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
SSC5D-201ENST00000389623 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
SSC5D-201ENST00000389623 TAF7LQ5H9L4 462 aa22.37■■□□□ 1.17
SSC5D-201ENST00000389623 VPS37CA5D8V6 355 aaPredicted RBP22.37■■□□□ 1.17
SSC5D-201ENST00000389623 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 MTHFSP49914 203 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 CCAR2Q8N163 923 aaKnown RBP22.36■■□□□ 1.17
SSC5D-201ENST00000389623 BICD2Q8TD16 824 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 MBD3O95983 291 aa22.36■■□□□ 1.17
SSC5D-201ENST00000389623 CREBRFQ8IUR6 639 aa22.35■■□□□ 1.17
SSC5D-201ENST00000389623 CCDC173Q0VFZ6 552 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 NOC3LQ8WTT2 800 aaKnown RBP22.34■■□□□ 1.17
SSC5D-201ENST00000389623 PTPRGP23470 1445 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 NBPF1Q3BBV0 1214 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 CFTRP13569 1480 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
SSC5D-201ENST00000389623 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
SSC5D-201ENST00000389623 MCM4P33991 863 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 RASSF8Q8NHQ8 419 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
SSC5D-201ENST00000389623 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
SSC5D-201ENST00000389623 GRPEL1Q9HAV7 217 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 GPS2Q13227 327 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 IFT57Q9NWB7 429 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 RABEP1Q15276 862 aa22.31■■□□□ 1.16
SSC5D-201ENST00000389623 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
SSC5D-201ENST00000389623 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
SSC5D-201ENST00000389623 SYNJ1O43426 1573 aa22.3■■□□□ 1.16
SSC5D-201ENST00000389623 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 SASS6Q6UVJ0 657 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 TOMM22Q9NS69 142 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 PRPF40AO75400 957 aaKnown RBP22.29■■□□□ 1.16
SSC5D-201ENST00000389623 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 ESPNB1AK53 854 aa22.29■■□□□ 1.16
SSC5D-201ENST00000389623 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
SSC5D-201ENST00000389623 IFIT2P09913 472 aaKnown RBP22.28■■□□□ 1.16
SSC5D-201ENST00000389623 HMOX1P09601 288 aa22.28■■□□□ 1.16
SSC5D-201ENST00000389623 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
SSC5D-201ENST00000389623 NEK4P51957 841 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 TEFQ10587 303 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 NINLQ9Y2I6 1382 aa22.27■■□□□ 1.16
SSC5D-201ENST00000389623 HMGN5P82970 282 aaKnown RBP22.26■■□□□ 1.15
SSC5D-201ENST00000389623 CPLX2Q6PUV4 134 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms