RNA–Protein interactions for RNA: ENST00000389398.9

VWA3A-202, Transcript of von Willebrand factor A domain containing 3A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VWA3A, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-202ENST00000389398 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
VWA3A-202ENST00000389398 GRPEL1Q9HAV7 217 aa9.72□□□□□ -0.85
VWA3A-202ENST00000389398 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.85
VWA3A-202ENST00000389398 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.85
VWA3A-202ENST00000389398 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.85
VWA3A-202ENST00000389398 PAIP2Q9BPZ3 127 aaKnown RBP9.71□□□□□ -0.86
VWA3A-202ENST00000389398 CTR9Q6PD62 1173 aa9.71□□□□□ -0.86
VWA3A-202ENST00000389398 CEP89Q96ST8 783 aa9.71□□□□□ -0.86
VWA3A-202ENST00000389398 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
VWA3A-202ENST00000389398 TDO2P48775 406 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
VWA3A-202ENST00000389398 MROH2BQ7Z745 1585 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 NEXNQ0ZGT2 675 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 ZRSR2Q15696 482 aaKnown RBP9.7□□□□□ -0.86
VWA3A-202ENST00000389398 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 FBXO41Q8TF61 875 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 FAM107BQ9H098 131 aa9.7□□□□□ -0.86
VWA3A-202ENST00000389398 PRG4Q92954 1404 aaPredicted RBP9.69□□□□□ -0.86
VWA3A-202ENST00000389398 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
VWA3A-202ENST00000389398 SF3A1Q15459 793 aaKnown RBP9.69□□□□□ -0.86
VWA3A-202ENST00000389398 GTPBP4Q9BZE4 634 aaKnown RBP9.69□□□□□ -0.86
VWA3A-202ENST00000389398 POGZQ7Z3K3 1410 aa9.69□□□□□ -0.86
VWA3A-202ENST00000389398 TRERF1Q96PN7 1200 aa9.69□□□□□ -0.86
VWA3A-202ENST00000389398 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
VWA3A-202ENST00000389398 LMOD3Q0VAK6 560 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 CARD11Q9BXL7 1154 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 RNF214Q8ND24 703 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 MBD3O95983 291 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 WWC1Q8IX03 1113 aa9.68□□□□□ -0.86
VWA3A-202ENST00000389398 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 CT47A1Q5JQC4 288 aaPredicted RBP9.67□□□□□ -0.86
VWA3A-202ENST00000389398 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 CCP110O43303 1012 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 RAPGEF3O95398 923 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 RNF20Q5VTR2 975 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 GOLGA6L10A6NI86 522 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 NBPF1Q3BBV0 1214 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
VWA3A-202ENST00000389398 ERLIN1O75477 346 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 NPHP1O15259 732 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 SKIDA1Q1XH10 827 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 MCTP1Q6DN14 999 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 EXOC6Q8TAG9 804 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 RBM28Q9NW13 759 aaKnown RBP9.66□□□□□ -0.86
VWA3A-202ENST00000389398 TNIKQ9UKE5 1360 aa9.66□□□□□ -0.86
VWA3A-202ENST00000389398 TTLL5Q6EMB2 1281 aa9.65□□□□□ -0.86
VWA3A-202ENST00000389398 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
VWA3A-202ENST00000389398 CREBRFQ8IUR6 639 aa9.65□□□□□ -0.86
VWA3A-202ENST00000389398 ITPRIPQ8IWB1 547 aa9.65□□□□□ -0.86
VWA3A-202ENST00000389398 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
VWA3A-202ENST00000389398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.65□□□□□ -0.86
VWA3A-202ENST00000389398 GOLGA3Q08378 1498 aa9.65□□□□□ -0.87
VWA3A-202ENST00000389398 MNAT1P51948 309 aa9.65□□□□□ -0.87
VWA3A-202ENST00000389398 RRP1P56182 461 aaKnown RBP9.65□□□□□ -0.87
VWA3A-202ENST00000389398 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.87
VWA3A-202ENST00000389398 LAMC3Q9Y6N6 1575 aa9.65□□□□□ -0.87
VWA3A-202ENST00000389398 RAD54L2Q9Y4B4 1467 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 CLCN1P35523 988 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 SMAP1Q8IYB5 467 aaPredicted RBP9.64□□□□□ -0.87
VWA3A-202ENST00000389398 CFDP1Q9UEE9 299 aaPredicted RBP9.64□□□□□ -0.87
VWA3A-202ENST00000389398 MSH5O43196 834 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 KIF20AO95235 890 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 FAM193AP78312 1265 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
VWA3A-202ENST00000389398 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
VWA3A-202ENST00000389398 CLIP1P30622 1438 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 DNAAF4Q8WXU2 420 aa9.64□□□□□ -0.87
VWA3A-202ENST00000389398 TMCO5BA8MYB1 307 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 GRIN2BQ13224 1484 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 LMTK3Q96Q04 1460 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 APBB1O00213 710 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 DHX8Q14562 1220 aaKnown RBP9.63□□□□□ -0.87
VWA3A-202ENST00000389398 RALBP1Q15311 655 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 TRIM5Q9C035 493 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
VWA3A-202ENST00000389398 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
VWA3A-202ENST00000389398 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.87
VWA3A-202ENST00000389398 SARNPP82979 210 aaKnown RBP9.62□□□□□ -0.87
VWA3A-202ENST00000389398 TMCO3Q6UWJ1 677 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 TICAM2Q86XR7 235 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 CARMIL1Q5VZK9 1371 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 GORABQ5T7V8 394 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 ANKRD20A12PQ8NF67 263 aa9.62□□□□□ -0.87
VWA3A-202ENST00000389398 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
VWA3A-202ENST00000389398 CLSTN1O94985 981 aa9.61□□□□□ -0.87
VWA3A-202ENST00000389398 STK31Q9BXU1 1019 aa9.61□□□□□ -0.87
VWA3A-202ENST00000389398 CGNL1Q0VF96 1302 aa9.61□□□□□ -0.87
VWA3A-202ENST00000389398 SHTN1A0MZ66 631 aa9.61□□□□□ -0.87
VWA3A-202ENST00000389398 H3BQV1 296 aa9.6□□□□□ -0.87
VWA3A-202ENST00000389398 CEBPAP49715 358 aaPredicted RBP9.6□□□□□ -0.87
VWA3A-202ENST00000389398 IFFO2Q5TF58 517 aa9.6□□□□□ -0.87
VWA3A-202ENST00000389398 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms