RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ARHGAP33O14559 1287 aa0.04□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRTAP19-4Q3LI73 84 aa0.04□□□□□ -2.4
RNU6-1340P-201ENST00000384438 ZDHHC13Q8IUH4 622 aa0.04□□□□□ -2.4
RNU6-1340P-201ENST00000384438 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
RNU6-1340P-201ENST00000384438 SSPOA2VEC9 5147 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KDM4FA0A1W2PPD8 638 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 DBX1A6NMT0 343 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 IRAK1P51617 712 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRT76Q01546 638 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 WHAMMQ8TF30 809 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KIFC2Q96AC6 838 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 MENTQ9BUN1 341 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 RAPGEFL1Q9UHV5 662 aa0.03□□□□□ -2.4
RNU6-1340P-201ENST00000384438 KRTAP10-5P60370 271 aa0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 STAC3Q96MF2 364 aa0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 PHF20L1A8MW92 1017 aa0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 TTLL10Q6ZVT0 673 aa0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 SVOPQ8N4V2 548 aa0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 CNKSR2Q8WXI2 1034 aa0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 CDCA7Q9BWT1 371 aaPredicted RBP0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 SENP3-EIF4A1A0A087X0R7 540 aa0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 AKAP8O43823 692 aaKnown RBP0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 ITGB6P18564 788 aa0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 RSPO4Q2I0M5 234 aaPredicted RBP0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 CNTNAP5Q8WYK1 1306 aa0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 EIF4ENIF1Q9NRA8 985 aaKnown RBP0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 MUC16Q8WXI7 14507 aa-0□□□□□ -2.41
RNU6-1340P-201ENST00000384438 NKAPLQ5M9Q1 402 aa-0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 ZNF598Q86UK7 904 aaKnown RBP-0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 WNT2BQ93097 391 aa-0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 KRTAP2-2Q9BYT5 123 aa-0.01□□□□□ -2.41
RNU6-1340P-201ENST00000384438 IRS2Q9Y4H2 1338 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 TNFRSF10AO00220 468 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 DOC2BQ14184 412 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 HNRNPUL2Q1KMD3 747 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 SPRYD7Q5W111 196 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 NYAP1Q6ZVC0 841 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 ILDR1Q86SU0 546 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 PDCD7Q8N8D1 485 aaKnown RBP-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 L3MBTL3Q96JM7 780 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 CREBZFQ9NS37 354 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 SSUH2Q9Y2M2 353 aa-0.02□□□□□ -2.41
RNU6-1340P-201ENST00000384438 BHMG1C9JSJ3 638 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 PLEKHG5O94827 1062 aa-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 KRTAP10-11P60412 298 aa-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 ARSIQ5FYB1 569 aa-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 NELL2Q99435 816 aa-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 CCDC61Q9Y6R9 512 aa-0.03□□□□□ -2.41
RNU6-1340P-201ENST00000384438 ELNP15502 786 aa-0.04□□□□□ -2.42
RNU6-1340P-201ENST00000384438 WASP42768 502 aa-0.04□□□□□ -2.42
RNU6-1340P-201ENST00000384438 NFKB2Q00653 900 aa-0.04□□□□□ -2.42
RNU6-1340P-201ENST00000384438 PRSS36Q5K4E3 855 aa-0.04□□□□□ -2.42
RNU6-1340P-201ENST00000384438 BEND7Q8N7W2 519 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-1340P-201ENST00000384438 ANKRD17O75179 2603 aaKnown RBP-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 MAP3K13O43283 966 aa-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 SLC19A1P41440 591 aa-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CNTNAP3BQ96NU0 1288 aa-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CNTNAP3Q9BZ76 1288 aa-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 UNKLQ9H9P5 680 aaKnown RBP-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 FBN3Q75N90 2809 aa-0.05□□□□□ -2.42
RNU6-1340P-201ENST00000384438 C1QTNF9BB2RNN3 333 aa-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 DYRK3O43781 588 aa-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 PSEN2P49810 448 aa-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 SAMD1Q6SPF0 538 aaPredicted RBP-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 KHSRPQ92945 711 aaKnown RBP eCLIP-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 MYRFLQ96LU7 910 aa-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 VPS9D1Q9Y2B5 631 aa-0.06□□□□□ -2.42
RNU6-1340P-201ENST00000384438 KRTAP10-3P60369 221 aa-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CSRP2Q16527 193 aa-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 ALYREFQ86V81 257 aaKnown RBP-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CD163Q86VB7 1156 aa-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 TOR4AQ9NXH8 423 aa-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 OAS3Q9Y6K5 1087 aaKnown RBP-0.07□□□□□ -2.42
RNU6-1340P-201ENST00000384438 COL8A1P27658 744 aa-0.08□□□□□ -2.42
RNU6-1340P-201ENST00000384438 ZNF124Q15973 351 aa-0.08□□□□□ -2.42
RNU6-1340P-201ENST00000384438 ZNF575Q86XF7 245 aa-0.08□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CILP2Q8IUL8 1156 aa-0.08□□□□□ -2.42
RNU6-1340P-201ENST00000384438 GPR161Q8N6U8 529 aaKnown RBP-0.08□□□□□ -2.42
RNU6-1340P-201ENST00000384438 TTLL8A6PVC2 850 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 SMPD1P17405 629 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 TJAP1Q5JTD0 557 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 ZNF697Q5TEC3 545 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 GLCCI1Q86VQ1 547 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 MICALL1Q8N3F8 863 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 KRTAP1-5Q9BYS1 174 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 SLITRK6Q9H5Y7 841 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 PKD2L1Q9P0L9 805 aa-0.09□□□□□ -2.42
RNU6-1340P-201ENST00000384438 PCSK5Q92824 1860 aa-0.1□□□□□ -2.42
RNU6-1340P-201ENST00000384438 CTSWP56202 376 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 CRB2Q5IJ48 1285 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 BSPRYQ5W0U4 402 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LYPD4Q6UWN0 246 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LCNL1Q6ZST4 164 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 SORCS2Q96PQ0 1159 aa-0.1□□□□□ -2.43
RNU6-1340P-201ENST00000384438 GOLGA8CPA6NN73 597 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 ERVV-2B6SEH9 535 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LMOD2Q6P5Q4 547 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 SPATA3Q8NHX4 192 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 BORCS6Q96GS4 357 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms