RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 ZMYM3Q14202 1370 aa28.17■■■□□ 2.1
MSLN-201ENST00000382862 NRXN1Q9ULB1 1477 aa28.16■■■□□ 2.1
MSLN-201ENST00000382862 NEXMIFQ5QGS0 1516 aa28.15■■■□□ 2.1
MSLN-201ENST00000382862 SLC52A1Q9NWF4 448 aa28.15■■■□□ 2.1
MSLN-201ENST00000382862 ST20-MTHFSA0A0A6YYL1 179 aa28.12■■■□□ 2.09
MSLN-201ENST00000382862 KIAA1210Q9ULL0 1709 aa28.12■■■□□ 2.09
MSLN-201ENST00000382862 CCDC7Q96M83 1385 aa28.12■■■□□ 2.09
MSLN-201ENST00000382862 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
MSLN-201ENST00000382862 NUTM2DQ5VT03 806 aaPredicted RBP28.11■■■□□ 2.09
MSLN-201ENST00000382862 STAC3Q96MF2 364 aa28.1■■■□□ 2.09
MSLN-201ENST00000382862 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
MSLN-201ENST00000382862 FER1L4A9Z1Z3 1794 aa28.1■■■□□ 2.09
MSLN-201ENST00000382862 KIF7Q2M1P5 1343 aa28.1■■■□□ 2.09
MSLN-201ENST00000382862 CFAP70Q5T0N1 1121 aa28.09■■■□□ 2.09
MSLN-201ENST00000382862 PIK3C2GO75747 1445 aa28.07■■■□□ 2.08
MSLN-201ENST00000382862 RPGRIP1LQ68CZ1 1315 aa28.05■■■□□ 2.08
MSLN-201ENST00000382862 C3P01024 1663 aa28.04■■■□□ 2.08
MSLN-201ENST00000382862 CEBPAP49715 358 aaPredicted RBP28.03■■■□□ 2.08
MSLN-201ENST00000382862 A2ML1A8K2U0 1454 aa28.01■■■□□ 2.07
MSLN-201ENST00000382862 SENP3Q9H4L4 574 aaPredicted RBP28■■■□□ 2.07
MSLN-201ENST00000382862 SCAF11Q99590 1463 aaKnown RBP27.98■■■□□ 2.07
MSLN-201ENST00000382862 TNRQ92752 1358 aa27.98■■■□□ 2.07
MSLN-201ENST00000382862 TESK2Q96S53 571 aa27.97■■■□□ 2.07
MSLN-201ENST00000382862 ADGRB1O14514 1584 aa27.97■■■□□ 2.07
MSLN-201ENST00000382862 SETBP1Q9Y6X0 1596 aa27.94■■■□□ 2.06
MSLN-201ENST00000382862 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
MSLN-201ENST00000382862 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
MSLN-201ENST00000382862 POLR3GLQ9BT43 218 aa27.94■■■□□ 2.06
MSLN-201ENST00000382862 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
MSLN-201ENST00000382862 ZFYVE9O95405 1425 aa27.93■■■□□ 2.06
MSLN-201ENST00000382862 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
MSLN-201ENST00000382862 DISP3Q9P2K9 1392 aa27.92■■■□□ 2.06
MSLN-201ENST00000382862 UBR1Q8IWV7 1749 aa27.92■■■□□ 2.06
MSLN-201ENST00000382862 RIMS1Q86UR5 1692 aaKnown RBP27.91■■■□□ 2.06
MSLN-201ENST00000382862 TMEM132EQ6IEE7 984 aa27.9■■■□□ 2.06
MSLN-201ENST00000382862 ASXL1Q8IXJ9 1541 aa27.9■■■□□ 2.06
MSLN-201ENST00000382862 RIMS2Q9UQ26 1411 aa27.88■■■□□ 2.05
MSLN-201ENST00000382862 ADAMTSL3P82987 1691 aa27.86■■■□□ 2.05
MSLN-201ENST00000382862 KDM5AP29375 1690 aaKnown RBP27.85■■■□□ 2.05
MSLN-201ENST00000382862 MYO3AQ8NEV4 1616 aa27.83■■■□□ 2.05
MSLN-201ENST00000382862 NLRP1Q9C000 1473 aa27.8■■■□□ 2.04
MSLN-201ENST00000382862 TRAK1Q9UPV9 953 aa27.8■■■□□ 2.04
MSLN-201ENST00000382862 ALKQ9UM73 1620 aa27.8■■■□□ 2.04
MSLN-201ENST00000382862 NRXN3Q9Y4C0 1643 aa27.8■■■□□ 2.04
MSLN-201ENST00000382862 SETD1AO15047 1707 aaKnown RBP27.8■■■□□ 2.04
MSLN-201ENST00000382862 EIF3AQ14152 1382 aaKnown RBP27.8■■■□□ 2.04
MSLN-201ENST00000382862 ARHGEF28Q8N1W1 1705 aaKnown RBP27.8■■■□□ 2.04
MSLN-201ENST00000382862 PTPRMP28827 1452 aa27.79■■■□□ 2.04
MSLN-201ENST00000382862 ANP32CO43423 234 aa27.77■■■□□ 2.04
MSLN-201ENST00000382862 QRICH2Q9H0J4 1663 aa27.76■■■□□ 2.04
MSLN-201ENST00000382862 TMF1P82094 1093 aa27.76■■■□□ 2.03
MSLN-201ENST00000382862 TMEM2Q9UHN6 1383 aa27.75■■■□□ 2.03
MSLN-201ENST00000382862 YTHDC1Q96MU7 727 aaKnown RBP27.71■■■□□ 2.03
MSLN-201ENST00000382862 CENPJQ9HC77 1338 aaPredicted RBP27.71■■■□□ 2.03
MSLN-201ENST00000382862 STK26Q9P289 416 aa27.7■■■□□ 2.02
MSLN-201ENST00000382862 MYOM1P52179 1685 aa27.7■■■□□ 2.02
MSLN-201ENST00000382862 LTKP29376 864 aa27.68■■■□□ 2.02
MSLN-201ENST00000382862 YTHDC2Q9H6S0 1430 aaKnown RBP27.68■■■□□ 2.02
MSLN-201ENST00000382862 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.66■■■□□ 2.02
MSLN-201ENST00000382862 SBNO2Q9Y2G9 1366 aa27.66■■■□□ 2.02
MSLN-201ENST00000382862 CEP170BQ9Y4F5 1589 aaPredicted RBP27.65■■■□□ 2.02
MSLN-201ENST00000382862 PRKRIP1Q9H875 184 aaPredicted RBP27.64■■■□□ 2.02
MSLN-201ENST00000382862 SLIT1O75093 1534 aa27.64■■■□□ 2.02
MSLN-201ENST00000382862 ARHGAP23Q9P227 1491 aa27.64■■■□□ 2.02
MSLN-201ENST00000382862 CNGB1Q14028 1251 aaPredicted RBP27.64■■■□□ 2.01
MSLN-201ENST00000382862 METP08581 1390 aa27.62■■■□□ 2.01
MSLN-201ENST00000382862 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
MSLN-201ENST00000382862 TULP4Q9NRJ4 1543 aa27.6■■■□□ 2.01
MSLN-201ENST00000382862 ADAMTS13Q76LX8 1427 aa27.6■■■□□ 2.01
MSLN-201ENST00000382862 CCER2I3L3R5 266 aa27.59■■■□□ 2.01
MSLN-201ENST00000382862 ZNF142P52746 1687 aaPredicted RBP27.58■■■□□ 2.01
MSLN-201ENST00000382862 TXNDC2Q86VQ3 553 aa27.58■■■□□ 2.01
MSLN-201ENST00000382862 PANK3Q9H999 370 aa27.58■■■□□ 2.01
MSLN-201ENST00000382862 PER1O15534 1290 aaPredicted RBP27.56■■■□□ 2
MSLN-201ENST00000382862 CCDC184Q52MB2 194 aa27.56■■■□□ 2
MSLN-201ENST00000382862 PLEKHG1Q9ULL1 1385 aa27.56■■■□□ 2
MSLN-201ENST00000382862 PRAM1Q96QH2 718 aa27.56■■■□□ 2
MSLN-201ENST00000382862 HDGFP51858 240 aaKnown RBP27.55■■■□□ 2
MSLN-201ENST00000382862 LRPPRCP42704 1394 aaKnown RBP27.55■■■□□ 2
MSLN-201ENST00000382862 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
MSLN-201ENST00000382862 CDCA8Q53HL2 280 aa27.54■■■□□ 2
MSLN-201ENST00000382862 BCANQ96GW7 911 aa27.54■■■□□ 2
MSLN-201ENST00000382862 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
MSLN-201ENST00000382862 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
MSLN-201ENST00000382862 DLC1Q96QB1 1528 aa27.52■■■□□ 2
MSLN-201ENST00000382862 MED14O60244 1454 aa27.51■■■□□ 2
MSLN-201ENST00000382862 KNDC1Q76NI1 1749 aa27.5■■□□□ 1.99
MSLN-201ENST00000382862 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
MSLN-201ENST00000382862 WAPLQ7Z5K2 1190 aa27.5■■□□□ 1.99
MSLN-201ENST00000382862 SLC26A8Q96RN1 970 aa27.49■■□□□ 1.99
MSLN-201ENST00000382862 EID1Q9Y6B2 187 aa27.49■■□□□ 1.99
MSLN-201ENST00000382862 MINK1Q8N4C8 1332 aaPredicted RBP27.49■■□□□ 1.99
MSLN-201ENST00000382862 ABCC11Q96J66 1382 aa27.48■■□□□ 1.99
MSLN-201ENST00000382862 POGKQ9P215 609 aa27.47■■□□□ 1.99
MSLN-201ENST00000382862 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
MSLN-201ENST00000382862 PTPRUQ92729 1446 aa27.45■■□□□ 1.98
MSLN-201ENST00000382862 CPS1P31327 1500 aa27.44■■□□□ 1.98
MSLN-201ENST00000382862 TECPR2O15040 1411 aa27.44■■□□□ 1.98
MSLN-201ENST00000382862 CABP2Q9NPB3 220 aa27.44■■□□□ 1.98
MSLN-201ENST00000382862 EVC2Q86UK5 1308 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms