RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 FOXD4L1Q9NU39 408 aa18.88■□□□□ 0.61
VLDLR-202ENST00000382099 IQGAP2Q13576 1575 aa18.88■□□□□ 0.61
VLDLR-202ENST00000382099 KIF20AO95235 890 aa18.88■□□□□ 0.61
VLDLR-202ENST00000382099 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
VLDLR-202ENST00000382099 TSC1Q92574 1164 aa18.88■□□□□ 0.61
VLDLR-202ENST00000382099 E9PSI1 815 aa18.87■□□□□ 0.61
VLDLR-202ENST00000382099 CHMP4AQ9BY43 222 aa18.87■□□□□ 0.61
VLDLR-202ENST00000382099 DAPK1P53355 1430 aa18.87■□□□□ 0.61
VLDLR-202ENST00000382099 USP47Q96K76 1375 aa18.87■□□□□ 0.61
VLDLR-202ENST00000382099 PBRM1Q86U86 1689 aa18.86■□□□□ 0.61
VLDLR-202ENST00000382099 POLR1AO95602 1720 aaPredicted RBP18.86■□□□□ 0.61
VLDLR-202ENST00000382099 GBP4Q96PP9 640 aa18.86■□□□□ 0.61
VLDLR-202ENST00000382099 CC2D1BQ5T0F9 858 aaKnown RBP18.86■□□□□ 0.61
VLDLR-202ENST00000382099 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
VLDLR-202ENST00000382099 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
VLDLR-202ENST00000382099 GTPBP4Q9BZE4 634 aaKnown RBP18.85■□□□□ 0.61
VLDLR-202ENST00000382099 ABCC5O15440 1437 aa18.85■□□□□ 0.61
VLDLR-202ENST00000382099 LETM1O95202 739 aaPredicted RBP18.85■□□□□ 0.61
VLDLR-202ENST00000382099 SPDYE4A6NLX3 237 aa18.84■□□□□ 0.61
VLDLR-202ENST00000382099 PPP1R9BQ96SB3 815 aa18.84■□□□□ 0.61
VLDLR-202ENST00000382099 SASS6Q6UVJ0 657 aa18.83■□□□□ 0.61
VLDLR-202ENST00000382099 ZNF771Q7L3S4 317 aaPredicted RBP18.83■□□□□ 0.61
VLDLR-202ENST00000382099 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.61
VLDLR-202ENST00000382099 TNPO1Q92973 898 aaKnown RBP18.83■□□□□ 0.6
VLDLR-202ENST00000382099 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.6
VLDLR-202ENST00000382099 CSPP1Q1MSJ5 1256 aa18.82■□□□□ 0.6
VLDLR-202ENST00000382099 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
VLDLR-202ENST00000382099 PANK3Q9H999 370 aa18.81■□□□□ 0.6
VLDLR-202ENST00000382099 DDX49Q9Y6V7 483 aaKnown RBP18.81■□□□□ 0.6
VLDLR-202ENST00000382099 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
VLDLR-202ENST00000382099 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
VLDLR-202ENST00000382099 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
VLDLR-202ENST00000382099 ADAMTS12P58397 1594 aa18.8■□□□□ 0.6
VLDLR-202ENST00000382099 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
VLDLR-202ENST00000382099 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
VLDLR-202ENST00000382099 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
VLDLR-202ENST00000382099 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
VLDLR-202ENST00000382099 BCORL1Q5H9F3 1711 aa18.79■□□□□ 0.6
VLDLR-202ENST00000382099 PTMAP06454 111 aaKnown RBP18.79■□□□□ 0.6
VLDLR-202ENST00000382099 BCAR3O75815 825 aa18.78■□□□□ 0.6
VLDLR-202ENST00000382099 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
VLDLR-202ENST00000382099 NOL7Q9UMY1 257 aaKnown RBP18.78■□□□□ 0.6
VLDLR-202ENST00000382099 GOLGA6L22H0YM25 854 aa18.78■□□□□ 0.6
VLDLR-202ENST00000382099 COG6Q9Y2V7 657 aa18.78■□□□□ 0.6
VLDLR-202ENST00000382099 PZPP20742 1482 aa18.77■□□□□ 0.6
VLDLR-202ENST00000382099 ZNF500O60304 480 aaPredicted RBP18.76■□□□□ 0.59
VLDLR-202ENST00000382099 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
VLDLR-202ENST00000382099 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
VLDLR-202ENST00000382099 ZFP91Q96JP5 570 aaPredicted RBP18.75■□□□□ 0.59
VLDLR-202ENST00000382099 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 MPNDQ8N594 471 aa18.74■□□□□ 0.59
VLDLR-202ENST00000382099 NUP153P49790 1475 aaKnown RBP18.73■□□□□ 0.59
VLDLR-202ENST00000382099 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
VLDLR-202ENST00000382099 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
VLDLR-202ENST00000382099 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
VLDLR-202ENST00000382099 KCNJ4P48050 445 aa18.73■□□□□ 0.59
VLDLR-202ENST00000382099 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
VLDLR-202ENST00000382099 ADAMTS8Q9UP79 889 aa18.71■□□□□ 0.59
VLDLR-202ENST00000382099 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
VLDLR-202ENST00000382099 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.59
VLDLR-202ENST00000382099 CAVIN1Q6NZI2 390 aaKnown RBP18.71■□□□□ 0.59
VLDLR-202ENST00000382099 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
VLDLR-202ENST00000382099 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
VLDLR-202ENST00000382099 KIAA0556O60303 1618 aa18.7■□□□□ 0.58
VLDLR-202ENST00000382099 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.69■□□□□ 0.58
VLDLR-202ENST00000382099 PDZRN3Q9UPQ7 1066 aa18.69■□□□□ 0.58
VLDLR-202ENST00000382099 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
VLDLR-202ENST00000382099 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
VLDLR-202ENST00000382099 KDM5CP41229 1560 aa18.67■□□□□ 0.58
VLDLR-202ENST00000382099 PTMSP20962 102 aa18.67■□□□□ 0.58
VLDLR-202ENST00000382099 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
VLDLR-202ENST00000382099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
VLDLR-202ENST00000382099 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
VLDLR-202ENST00000382099 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
VLDLR-202ENST00000382099 RAPGEF6Q8TEU7 1601 aa18.66■□□□□ 0.58
VLDLR-202ENST00000382099 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
VLDLR-202ENST00000382099 RBSNQ9H1K0 784 aa18.66■□□□□ 0.58
VLDLR-202ENST00000382099 PDCL2Q8N4E4 241 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 RNF214Q8ND24 703 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 MYRIPQ8NFW9 859 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
VLDLR-202ENST00000382099 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
VLDLR-202ENST00000382099 KIF14Q15058 1648 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 SSFA2P28290 1259 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 ZNF710Q8N1W2 664 aa18.65■□□□□ 0.58
VLDLR-202ENST00000382099 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
VLDLR-202ENST00000382099 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.58
VLDLR-202ENST00000382099 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.58
VLDLR-202ENST00000382099 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.58
VLDLR-202ENST00000382099 KIAA1107Q9UPP5 1409 aa18.64■□□□□ 0.57
VLDLR-202ENST00000382099 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.57
VLDLR-202ENST00000382099 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.57
VLDLR-202ENST00000382099 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.57
VLDLR-202ENST00000382099 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
VLDLR-202ENST00000382099 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
VLDLR-202ENST00000382099 MCTP1Q6DN14 999 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms