RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 MTHFSP49914 203 aa18.75■□□□□ 0.59
TUSC3-201ENST00000382020 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
TUSC3-201ENST00000382020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
TUSC3-201ENST00000382020 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
TUSC3-201ENST00000382020 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
TUSC3-201ENST00000382020 RBM10P98175 930 aaKnown RBP18.73■□□□□ 0.59
TUSC3-201ENST00000382020 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
TUSC3-201ENST00000382020 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
TUSC3-201ENST00000382020 AMER1Q5JTC6 1135 aaPredicted RBP18.72■□□□□ 0.59
TUSC3-201ENST00000382020 EFCAB2Q5VUJ9 269 aa18.72■□□□□ 0.59
TUSC3-201ENST00000382020 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
TUSC3-201ENST00000382020 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
TUSC3-201ENST00000382020 CUL7Q14999 1698 aa18.72■□□□□ 0.59
TUSC3-201ENST00000382020 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
TUSC3-201ENST00000382020 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
TUSC3-201ENST00000382020 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
TUSC3-201ENST00000382020 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
TUSC3-201ENST00000382020 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
TUSC3-201ENST00000382020 RNF123Q5XPI4 1314 aa18.71■□□□□ 0.58
TUSC3-201ENST00000382020 ROCK1Q13464 1354 aa18.7■□□□□ 0.58
TUSC3-201ENST00000382020 FAM13BQ9NYF5 915 aa18.7■□□□□ 0.58
TUSC3-201ENST00000382020 ERBINQ96RT1 1412 aa18.7■□□□□ 0.58
TUSC3-201ENST00000382020 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
TUSC3-201ENST00000382020 PTPRGP23470 1445 aa18.69■□□□□ 0.58
TUSC3-201ENST00000382020 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
TUSC3-201ENST00000382020 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
TUSC3-201ENST00000382020 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
TUSC3-201ENST00000382020 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
TUSC3-201ENST00000382020 CABP2Q9NPB3 220 aa18.68■□□□□ 0.58
TUSC3-201ENST00000382020 GOLGA6L22H0YM25 854 aa18.67■□□□□ 0.58
TUSC3-201ENST00000382020 ZKSCAN2Q63HK3 967 aa18.67■□□□□ 0.58
TUSC3-201ENST00000382020 MSNP26038 577 aaKnown RBP18.66■□□□□ 0.58
TUSC3-201ENST00000382020 TESK2Q96S53 571 aa18.66■□□□□ 0.58
TUSC3-201ENST00000382020 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
TUSC3-201ENST00000382020 WWC1Q8IX03 1113 aa18.65■□□□□ 0.58
TUSC3-201ENST00000382020 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
TUSC3-201ENST00000382020 MINK1Q8N4C8 1332 aaPredicted RBP18.65■□□□□ 0.58
TUSC3-201ENST00000382020 MLECQ14165 292 aa18.65■□□□□ 0.58
TUSC3-201ENST00000382020 PZPP20742 1482 aa18.65■□□□□ 0.58
TUSC3-201ENST00000382020 IQGAP2Q13576 1575 aa18.65■□□□□ 0.58
TUSC3-201ENST00000382020 TRAK2O60296 914 aa18.64■□□□□ 0.58
TUSC3-201ENST00000382020 HMOX1P09601 288 aa18.64■□□□□ 0.58
TUSC3-201ENST00000382020 XRCC6P12956 609 aaKnown RBP eCLIP18.64■□□□□ 0.57
TUSC3-201ENST00000382020 PCDHB15Q9Y5E8 787 aa18.64■□□□□ 0.57
TUSC3-201ENST00000382020 PTMAP06454 111 aaKnown RBP18.63■□□□□ 0.57
TUSC3-201ENST00000382020 MPNDQ8N594 471 aa18.63■□□□□ 0.57
TUSC3-201ENST00000382020 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
TUSC3-201ENST00000382020 RLBP1P12271 317 aa18.63■□□□□ 0.57
TUSC3-201ENST00000382020 FBLN1P23142 703 aa18.63■□□□□ 0.57
TUSC3-201ENST00000382020 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
TUSC3-201ENST00000382020 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
TUSC3-201ENST00000382020 RRP9O43818 475 aaKnown RBP18.61■□□□□ 0.57
TUSC3-201ENST00000382020 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
TUSC3-201ENST00000382020 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
TUSC3-201ENST00000382020 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
TUSC3-201ENST00000382020 RIPK4P57078 832 aa18.6■□□□□ 0.57
TUSC3-201ENST00000382020 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
TUSC3-201ENST00000382020 KDM5BQ9UGL1 1544 aa18.6■□□□□ 0.57
TUSC3-201ENST00000382020 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
TUSC3-201ENST00000382020 ESPNB1AK53 854 aa18.6■□□□□ 0.57
TUSC3-201ENST00000382020 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
TUSC3-201ENST00000382020 DDX49Q9Y6V7 483 aaKnown RBP18.59■□□□□ 0.57
TUSC3-201ENST00000382020 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.57
TUSC3-201ENST00000382020 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
TUSC3-201ENST00000382020 KANK1Q14678 1352 aa18.58■□□□□ 0.56
TUSC3-201ENST00000382020 SLC4A10Q6U841 1118 aa18.57■□□□□ 0.56
TUSC3-201ENST00000382020 CHMP5Q9NZZ3 219 aa18.57■□□□□ 0.56
TUSC3-201ENST00000382020 MCM4P33991 863 aa18.56■□□□□ 0.56
TUSC3-201ENST00000382020 RARSP54136 660 aaKnown RBP18.55■□□□□ 0.56
TUSC3-201ENST00000382020 NOB1Q9ULX3 412 aaKnown RBP18.55■□□□□ 0.56
TUSC3-201ENST00000382020 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
TUSC3-201ENST00000382020 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
TUSC3-201ENST00000382020 R3HCC1Q9Y3T6 440 aaKnown RBP18.55■□□□□ 0.56
TUSC3-201ENST00000382020 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
TUSC3-201ENST00000382020 MRE11P49959 708 aa18.54■□□□□ 0.56
TUSC3-201ENST00000382020 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
TUSC3-201ENST00000382020 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
TUSC3-201ENST00000382020 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
TUSC3-201ENST00000382020 GRPEL1Q9HAV7 217 aa18.54■□□□□ 0.56
TUSC3-201ENST00000382020 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
TUSC3-201ENST00000382020 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
TUSC3-201ENST00000382020 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
TUSC3-201ENST00000382020 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
TUSC3-201ENST00000382020 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
TUSC3-201ENST00000382020 NECTIN2Q92692 538 aa18.53■□□□□ 0.56
TUSC3-201ENST00000382020 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
TUSC3-201ENST00000382020 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.56
TUSC3-201ENST00000382020 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
TUSC3-201ENST00000382020 RALGAPBQ86X10 1494 aa18.51■□□□□ 0.55
TUSC3-201ENST00000382020 PRDM10Q9NQV6 1147 aa18.51■□□□□ 0.55
TUSC3-201ENST00000382020 RNF214Q8ND24 703 aa18.5■□□□□ 0.55
TUSC3-201ENST00000382020 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
TUSC3-201ENST00000382020 KIAA0586Q9BVV6 1533 aa18.5■□□□□ 0.55
TUSC3-201ENST00000382020 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms