RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ERICH2A1L162 156 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 VPS37CA5D8V6 355 aaPredicted RBP7.13□□□□□ -1.27
RFX3-204ENST00000382004 RALBP1Q15311 655 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 KLHL34Q8N239 644 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 GOLGA3Q08378 1498 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 ANKRD62A6NC57 917 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 BCL2L13Q9BXK5 485 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 EVA1CP58658 441 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 KDM4AO75164 1064 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 RUFY2Q8WXA3 655 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 NUTM2DQ5VT03 806 aaPredicted RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 TSHZ2Q9NRE2 1034 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 CWC15Q9P013 229 aaKnown RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 FYB1O15117 783 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 ZKSCAN1P17029 563 aaPredicted RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 C1orf141Q5JVX7 400 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 ZRSR2Q15696 482 aaKnown RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 TERF2IPQ9NYB0 399 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 MYO6Q9UM54 1294 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 NECTIN2Q92692 538 aa7.12□□□□□ -1.27
RFX3-204ENST00000382004 C9orf78Q9NZ63 289 aaPredicted RBP7.12□□□□□ -1.27
RFX3-204ENST00000382004 EIF2S2P20042 333 aaKnown RBP7.11□□□□□ -1.27
RFX3-204ENST00000382004 PKD2Q13563 968 aa7.11□□□□□ -1.27
RFX3-204ENST00000382004 SAFBQ15424 915 aaKnown RBP eCLIP7.11□□□□□ -1.27
RFX3-204ENST00000382004 OLFM4Q6UX06 510 aa7.11□□□□□ -1.27
RFX3-204ENST00000382004 CCDC180Q9P1Z9 1646 aa7.11□□□□□ -1.27
RFX3-204ENST00000382004 IFIT2P09913 472 aaKnown RBP7.11□□□□□ -1.27
RFX3-204ENST00000382004 AXDND1Q5T1B0 1012 aaPredicted RBP7.1□□□□□ -1.27
RFX3-204ENST00000382004 FAM161AQ3B820 660 aa7.1□□□□□ -1.27
RFX3-204ENST00000382004 FAM43AQ8N2R8 423 aa7.1□□□□□ -1.27
RFX3-204ENST00000382004 CCDC73Q6ZRK6 1079 aa7.1□□□□□ -1.27
RFX3-204ENST00000382004 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
RFX3-204ENST00000382004 SMC3Q9UQE7 1217 aa7.1□□□□□ -1.27
RFX3-204ENST00000382004 NEXNQ0ZGT2 675 aa7.1□□□□□ -1.27
RFX3-204ENST00000382004 SEPT7Q16181 437 aaKnown RBP7.1□□□□□ -1.27
RFX3-204ENST00000382004 IKQ13123 557 aaPredicted RBP7.09□□□□□ -1.27
RFX3-204ENST00000382004 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
RFX3-204ENST00000382004 ERCC4Q92889 916 aaPredicted RBP7.09□□□□□ -1.27
RFX3-204ENST00000382004 PLIN1O60240 522 aa7.09□□□□□ -1.27
RFX3-204ENST00000382004 CGNL1Q0VF96 1302 aa7.09□□□□□ -1.27
RFX3-204ENST00000382004 EIF4G1Q04637 1599 aaKnown RBP7.09□□□□□ -1.27
RFX3-204ENST00000382004 ENOX2Q16206 610 aaKnown RBP7.09□□□□□ -1.27
RFX3-204ENST00000382004 REC8O95072 547 aa7.09□□□□□ -1.27
RFX3-204ENST00000382004 RNF20Q5VTR2 975 aa7.09□□□□□ -1.27
RFX3-204ENST00000382004 EIF3AQ14152 1382 aaKnown RBP7.09□□□□□ -1.27
RFX3-204ENST00000382004 CCDC27Q2M243 656 aa7.09□□□□□ -1.28
RFX3-204ENST00000382004 CENPQQ7L2Z9 268 aaPredicted RBP7.09□□□□□ -1.28
RFX3-204ENST00000382004 TTC5Q8N0Z6 440 aa7.09□□□□□ -1.28
RFX3-204ENST00000382004 PDE4AP27815 886 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 BRPF1P55201 1214 aaPredicted RBP7.08□□□□□ -1.28
RFX3-204ENST00000382004 CT47B1P0C2W7 299 aaPredicted RBP7.08□□□□□ -1.28
RFX3-204ENST00000382004 TEFQ10587 303 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 LEKR1Q6ZMV7 388 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 CCDC97Q96F63 343 aaPredicted RBP7.08□□□□□ -1.28
RFX3-204ENST00000382004 EID1Q9Y6B2 187 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 SYCP1Q15431 976 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 BRMS1Q9HCU9 246 aa7.08□□□□□ -1.28
RFX3-204ENST00000382004 RBM33Q96EV2 1170 aaKnown RBP7.07□□□□□ -1.28
RFX3-204ENST00000382004 NAT10Q9H0A0 1025 aaKnown RBP7.07□□□□□ -1.28
RFX3-204ENST00000382004 SMC2O95347 1197 aa7.07□□□□□ -1.28
RFX3-204ENST00000382004 G3BP1Q13283 466 aaKnown RBP eCLIP7.07□□□□□ -1.28
RFX3-204ENST00000382004 SDF4Q9BRK5 362 aa7.07□□□□□ -1.28
RFX3-204ENST00000382004 RALYLQ86SE5 291 aaKnown RBP7.06□□□□□ -1.28
RFX3-204ENST00000382004 CRBNQ96SW2 442 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 ERLIN2O94905 339 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 ZKSCAN2Q63HK3 967 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 TAX1BP1Q86VP1 789 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 MAGEC2Q9UBF1 373 aaPredicted RBP7.06□□□□□ -1.28
RFX3-204ENST00000382004 COG6Q9Y2V7 657 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 CENPHQ9H3R5 247 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 GOLGA6L10A6NI86 522 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 KIAA0754O94854 1291 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 WASHC4Q2M389 1173 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 MEX3CQ5U5Q3 659 aaKnown RBP7.06□□□□□ -1.28
RFX3-204ENST00000382004 ANKRD18AQ8IVF6 992 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 CCAR1Q8IX12 1150 aaKnown RBP7.06□□□□□ -1.28
RFX3-204ENST00000382004 RNF214Q8ND24 703 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 CDK5RAP3Q96JB5 506 aa7.06□□□□□ -1.28
RFX3-204ENST00000382004 ATP2B1P20020 1258 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 SMARCE1Q969G3 411 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 FMNL2Q96PY5 1086 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 CCDC39Q9UFE4 941 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 TRIM5Q9C035 493 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 XBP1P17861 261 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 NEUROD6Q96NK8 337 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 CLASRPQ8N2M8 674 aaKnown RBP7.05□□□□□ -1.28
RFX3-204ENST00000382004 ERCC6Q03468 1493 aa7.05□□□□□ -1.28
RFX3-204ENST00000382004 FILIP1LQ4L180 1135 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 TRAK1Q9UPV9 953 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 KRT18P05783 430 aaKnown RBP7.04□□□□□ -1.28
RFX3-204ENST00000382004 PDE3BQ13370 1112 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 DYDC1Q8WWB3 177 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 PDCL3Q9H2J4 239 aa7.04□□□□□ -1.28
RFX3-204ENST00000382004 EZRP15311 586 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms