RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CLUAP1Q96AJ1 413 aa19.13■□□□□ 0.65
CTNS-202ENST00000381870 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
CTNS-202ENST00000381870 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
CTNS-202ENST00000381870 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 JPH4Q96JJ6 628 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 GRPEL1Q9HAV7 217 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
CTNS-202ENST00000381870 PANK1Q8TE04 598 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 CROCC2H7BZ55 1655 aa19.12■□□□□ 0.65
CTNS-202ENST00000381870 ERBINQ96RT1 1412 aa19.11■□□□□ 0.65
CTNS-202ENST00000381870 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
CTNS-202ENST00000381870 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
CTNS-202ENST00000381870 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
CTNS-202ENST00000381870 TMF1P82094 1093 aa19.08■□□□□ 0.65
CTNS-202ENST00000381870 CHD1O14646 1710 aa19.08■□□□□ 0.64
CTNS-202ENST00000381870 APAF1O14727 1248 aa19.08■□□□□ 0.64
CTNS-202ENST00000381870 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
CTNS-202ENST00000381870 CHMP5Q9NZZ3 219 aa19.07■□□□□ 0.64
CTNS-202ENST00000381870 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
CTNS-202ENST00000381870 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
CTNS-202ENST00000381870 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
CTNS-202ENST00000381870 MAGI2Q86UL8 1455 aa19.05■□□□□ 0.64
CTNS-202ENST00000381870 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
CTNS-202ENST00000381870 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
CTNS-202ENST00000381870 TROQ12816 1431 aaPredicted RBP19.04■□□□□ 0.64
CTNS-202ENST00000381870 TRIM44Q96DX7 344 aaPredicted RBP19.04■□□□□ 0.64
CTNS-202ENST00000381870 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
CTNS-202ENST00000381870 NUP160Q12769 1436 aa19.04■□□□□ 0.64
CTNS-202ENST00000381870 E9PSI1 815 aa19.03■□□□□ 0.64
CTNS-202ENST00000381870 TPM2P07951 284 aa19.03■□□□□ 0.64
CTNS-202ENST00000381870 PDZRN3Q9UPQ7 1066 aa19.03■□□□□ 0.64
CTNS-202ENST00000381870 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
CTNS-202ENST00000381870 PDCL3Q9H2J4 239 aa19.03■□□□□ 0.64
CTNS-202ENST00000381870 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
CTNS-202ENST00000381870 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
CTNS-202ENST00000381870 C9orf84Q5VXU9 1444 aa19.02■□□□□ 0.63
CTNS-202ENST00000381870 GAS2L3Q86XJ1 694 aa19.01■□□□□ 0.63
CTNS-202ENST00000381870 CENPJQ9HC77 1338 aaPredicted RBP19.01■□□□□ 0.63
CTNS-202ENST00000381870 PTPRGP23470 1445 aa19.01■□□□□ 0.63
CTNS-202ENST00000381870 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
CTNS-202ENST00000381870 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
CTNS-202ENST00000381870 A2MP01023 1474 aa19■□□□□ 0.63
CTNS-202ENST00000381870 WDR7Q9Y4E6 1490 aa19■□□□□ 0.63
CTNS-202ENST00000381870 DDX11L8A8MPP1 907 aa18.99■□□□□ 0.63
CTNS-202ENST00000381870 PMFBP1Q8TBY8 1022 aa18.99■□□□□ 0.63
CTNS-202ENST00000381870 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
CTNS-202ENST00000381870 ZNF692Q9BU19 519 aaPredicted RBP18.98■□□□□ 0.63
CTNS-202ENST00000381870 C22orf23Q9BZE7 217 aa18.98■□□□□ 0.63
CTNS-202ENST00000381870 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
CTNS-202ENST00000381870 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
CTNS-202ENST00000381870 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
CTNS-202ENST00000381870 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
CTNS-202ENST00000381870 DISP1Q96F81 1524 aa18.97■□□□□ 0.63
CTNS-202ENST00000381870 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
CTNS-202ENST00000381870 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
CTNS-202ENST00000381870 LAMC1P11047 1609 aa18.96■□□□□ 0.63
CTNS-202ENST00000381870 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
CTNS-202ENST00000381870 RLBP1P12271 317 aa18.96■□□□□ 0.63
CTNS-202ENST00000381870 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
CTNS-202ENST00000381870 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 TSPY4P0CV99 314 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 TSPY10P0CW01 314 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
CTNS-202ENST00000381870 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
CTNS-202ENST00000381870 ADCY10Q96PN6 1610 aa18.92■□□□□ 0.62
CTNS-202ENST00000381870 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
CTNS-202ENST00000381870 HSCBQ8IWL3 235 aa18.92■□□□□ 0.62
CTNS-202ENST00000381870 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
CTNS-202ENST00000381870 PLA2R1Q13018 1463 aa18.92■□□□□ 0.62
CTNS-202ENST00000381870 TNPO1Q92973 898 aaKnown RBP18.92■□□□□ 0.62
CTNS-202ENST00000381870 PRDM4Q9UKN5 801 aa18.92■□□□□ 0.62
CTNS-202ENST00000381870 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
CTNS-202ENST00000381870 DDIT3P35638 169 aa18.91■□□□□ 0.62
CTNS-202ENST00000381870 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
CTNS-202ENST00000381870 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
CTNS-202ENST00000381870 RARSP54136 660 aaKnown RBP18.9■□□□□ 0.62
CTNS-202ENST00000381870 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
CTNS-202ENST00000381870 RWDD1Q9H446 243 aaPredicted RBP18.9■□□□□ 0.62
CTNS-202ENST00000381870 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.62
CTNS-202ENST00000381870 RIPK4P57078 832 aa18.89■□□□□ 0.61
CTNS-202ENST00000381870 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
CTNS-202ENST00000381870 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
CTNS-202ENST00000381870 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
CTNS-202ENST00000381870 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
CTNS-202ENST00000381870 OFD1O75665 1012 aa18.86■□□□□ 0.61
CTNS-202ENST00000381870 ZSCAN30Q86W11 494 aa18.86■□□□□ 0.61
CTNS-202ENST00000381870 MYO5CQ9NQX4 1742 aa18.86■□□□□ 0.61
CTNS-202ENST00000381870 EIF2AK4Q9P2K8 1649 aaKnown RBP18.86■□□□□ 0.61
CTNS-202ENST00000381870 CCDC173Q0VFZ6 552 aa18.85■□□□□ 0.61
CTNS-202ENST00000381870 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
CTNS-202ENST00000381870 CARMIL2Q6F5E8 1435 aa18.85■□□□□ 0.61
CTNS-202ENST00000381870 CCDC141Q6ZP82 1450 aa18.85■□□□□ 0.61
CTNS-202ENST00000381870 AAMPQ13685 434 aa18.85■□□□□ 0.61
CTNS-202ENST00000381870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTNS-202ENST00000381870 PPP1R9BQ96SB3 815 aa18.84■□□□□ 0.61
CTNS-202ENST00000381870 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms