RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 TESK2Q96S53 571 aa14.14□□□□□ -0.15
NPC1L1-202ENST00000381160 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
NPC1L1-202ENST00000381160 PLEKHH2Q8IVE3 1493 aa14.14□□□□□ -0.15
NPC1L1-202ENST00000381160 HSP90AB1P08238 724 aaKnown RBP14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 CLCN1P35523 988 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 ESPNB1AK53 854 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 C22orf23Q9BZE7 217 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 RRP9O43818 475 aaKnown RBP14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 GRPEL1Q9HAV7 217 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
NPC1L1-202ENST00000381160 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
NPC1L1-202ENST00000381160 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
NPC1L1-202ENST00000381160 NCLP19338 710 aaKnown RBP14.12□□□□□ -0.15
NPC1L1-202ENST00000381160 TBC1D32Q96NH3 1257 aa14.12□□□□□ -0.15
NPC1L1-202ENST00000381160 PDE3AQ14432 1141 aa14.11□□□□□ -0.15
NPC1L1-202ENST00000381160 TNNQ9UQP3 1299 aa14.11□□□□□ -0.15
NPC1L1-202ENST00000381160 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
NPC1L1-202ENST00000381160 IQGAP2Q13576 1575 aa14.11□□□□□ -0.15
NPC1L1-202ENST00000381160 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
NPC1L1-202ENST00000381160 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
NPC1L1-202ENST00000381160 DDX11L8A8MPP1 907 aa14.09□□□□□ -0.15
NPC1L1-202ENST00000381160 PCDHB15Q9Y5E8 787 aa14.09□□□□□ -0.15
NPC1L1-202ENST00000381160 WDR62O43379 1518 aa14.09□□□□□ -0.15
NPC1L1-202ENST00000381160 ANTXR1Q9H6X2 564 aa14.09□□□□□ -0.15
NPC1L1-202ENST00000381160 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
NPC1L1-202ENST00000381160 MSNP26038 577 aaKnown RBP14.07□□□□□ -0.16
NPC1L1-202ENST00000381160 GPATCH8Q9UKJ3 1502 aaKnown RBP14.07□□□□□ -0.16
NPC1L1-202ENST00000381160 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 RBM10P98175 930 aaKnown RBP14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 GBP4Q96PP9 640 aa14.06□□□□□ -0.16
NPC1L1-202ENST00000381160 RLBP1P12271 317 aa14.05□□□□□ -0.16
NPC1L1-202ENST00000381160 WWC1Q8IX03 1113 aa14.05□□□□□ -0.16
NPC1L1-202ENST00000381160 ARHGEF12Q9NZN5 1544 aa14.05□□□□□ -0.16
NPC1L1-202ENST00000381160 ZNF521Q96K83 1311 aa14.05□□□□□ -0.16
NPC1L1-202ENST00000381160 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
NPC1L1-202ENST00000381160 COL17A1Q9UMD9 1497 aaPredicted RBP14.04□□□□□ -0.16
NPC1L1-202ENST00000381160 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
NPC1L1-202ENST00000381160 KIAA1211Q6ZU35 1233 aa14.04□□□□□ -0.16
NPC1L1-202ENST00000381160 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
NPC1L1-202ENST00000381160 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
NPC1L1-202ENST00000381160 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
NPC1L1-202ENST00000381160 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
NPC1L1-202ENST00000381160 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
NPC1L1-202ENST00000381160 SMC4Q9NTJ3 1288 aa14.02□□□□□ -0.17
NPC1L1-202ENST00000381160 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
NPC1L1-202ENST00000381160 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
NPC1L1-202ENST00000381160 ERBB4Q15303 1308 aa14□□□□□ -0.17
NPC1L1-202ENST00000381160 DDX49Q9Y6V7 483 aaKnown RBP14□□□□□ -0.17
NPC1L1-202ENST00000381160 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
NPC1L1-202ENST00000381160 LNPKQ9C0E8 428 aa14□□□□□ -0.17
NPC1L1-202ENST00000381160 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
NPC1L1-202ENST00000381160 NASPP49321 788 aaPredicted RBP13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 ZKSCAN2Q63HK3 967 aa13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 INSRP06213 1382 aa13.99□□□□□ -0.17
NPC1L1-202ENST00000381160 R3HCC1Q9Y3T6 440 aaKnown RBP13.98□□□□□ -0.17
NPC1L1-202ENST00000381160 TPM2P07951 284 aa13.98□□□□□ -0.17
NPC1L1-202ENST00000381160 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
NPC1L1-202ENST00000381160 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
NPC1L1-202ENST00000381160 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
NPC1L1-202ENST00000381160 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
NPC1L1-202ENST00000381160 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 ADGRL2O95490 1459 aa13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
NPC1L1-202ENST00000381160 MVPQ14764 893 aaKnown RBP13.96□□□□□ -0.18
NPC1L1-202ENST00000381160 A2MP01023 1474 aa13.95□□□□□ -0.18
NPC1L1-202ENST00000381160 SKOR2Q2VWA4 1001 aaPredicted RBP13.95□□□□□ -0.18
NPC1L1-202ENST00000381160 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
NPC1L1-202ENST00000381160 TPRNQ4KMQ1 711 aa13.93□□□□□ -0.18
NPC1L1-202ENST00000381160 PDCL3Q9H2J4 239 aa13.93□□□□□ -0.18
NPC1L1-202ENST00000381160 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
NPC1L1-202ENST00000381160 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 FAM135AQ9P2D6 1515 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 GPRASP1Q5JY77 1395 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 PTMAP06454 111 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 ANKRD45Q5TZF3 282 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
NPC1L1-202ENST00000381160 CARMIL2Q6F5E8 1435 aa13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 SSFA2P28290 1259 aa13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 MTHFSP49914 203 aa13.91□□□□□ -0.18
NPC1L1-202ENST00000381160 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms