RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
PDX1-201ENST00000381033 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
PDX1-201ENST00000381033 MROH2AA6NES4 1674 aa23.29■■□□□ 1.32
PDX1-201ENST00000381033 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
PDX1-201ENST00000381033 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
PDX1-201ENST00000381033 FAM69CQ0P6D2 419 aa23.28■■□□□ 1.32
PDX1-201ENST00000381033 RALBP1Q15311 655 aa23.27■■□□□ 1.32
PDX1-201ENST00000381033 NEO1Q92859 1461 aa23.26■■□□□ 1.31
PDX1-201ENST00000381033 IQGAP1P46940 1657 aa23.26■■□□□ 1.31
PDX1-201ENST00000381033 RIMBP3CA6NJZ7 1639 aa23.25■■□□□ 1.31
PDX1-201ENST00000381033 RIMBP3BA6NNM3 1639 aa23.25■■□□□ 1.31
PDX1-201ENST00000381033 RIMBP3Q9UFD9 1639 aa23.25■■□□□ 1.31
PDX1-201ENST00000381033 KIF1BO60333 1816 aa23.25■■□□□ 1.31
PDX1-201ENST00000381033 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
PDX1-201ENST00000381033 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
PDX1-201ENST00000381033 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
PDX1-201ENST00000381033 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
PDX1-201ENST00000381033 NOS1P29475 1434 aa23.23■■□□□ 1.31
PDX1-201ENST00000381033 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
PDX1-201ENST00000381033 DIP2CQ9Y2E4 1556 aa23.21■■□□□ 1.31
PDX1-201ENST00000381033 MAP3K4Q9Y6R4 1608 aa23.21■■□□□ 1.31
PDX1-201ENST00000381033 ABCC3O15438 1527 aa23.21■■□□□ 1.31
PDX1-201ENST00000381033 RICTORQ6R327 1708 aa23.2■■□□□ 1.3
PDX1-201ENST00000381033 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
PDX1-201ENST00000381033 BRD4O60885 1362 aaPredicted RBP23.2■■□□□ 1.3
PDX1-201ENST00000381033 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
PDX1-201ENST00000381033 NLRP13Q86W25 1043 aa23.18■■□□□ 1.3
PDX1-201ENST00000381033 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
PDX1-201ENST00000381033 TSPOAP1O95153 1857 aa23.18■■□□□ 1.3
PDX1-201ENST00000381033 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
PDX1-201ENST00000381033 IFT172Q9UG01 1749 aa23.15■■□□□ 1.3
PDX1-201ENST00000381033 TRAK1Q9UPV9 953 aa23.15■■□□□ 1.3
PDX1-201ENST00000381033 ADGRB3O60242 1522 aa23.15■■□□□ 1.3
PDX1-201ENST00000381033 MYOM2P54296 1465 aa23.15■■□□□ 1.3
PDX1-201ENST00000381033 TSHZ2Q9NRE2 1034 aa23.14■■□□□ 1.3
PDX1-201ENST00000381033 CAMSAP1Q5T5Y3 1602 aa23.12■■□□□ 1.29
PDX1-201ENST00000381033 IDI1Q13907 227 aa23.12■■□□□ 1.29
PDX1-201ENST00000381033 NEURL4Q96JN8 1562 aa23.12■■□□□ 1.29
PDX1-201ENST00000381033 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
PDX1-201ENST00000381033 PKNOX2Q96KN3 472 aa23.11■■□□□ 1.29
PDX1-201ENST00000381033 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
PDX1-201ENST00000381033 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
PDX1-201ENST00000381033 KIAA1210Q9ULL0 1709 aa23.1■■□□□ 1.29
PDX1-201ENST00000381033 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
PDX1-201ENST00000381033 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
PDX1-201ENST00000381033 SYNMO15061 1565 aa23.09■■□□□ 1.29
PDX1-201ENST00000381033 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
PDX1-201ENST00000381033 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
PDX1-201ENST00000381033 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
PDX1-201ENST00000381033 NUDCQ9Y266 331 aa23.07■■□□□ 1.28
PDX1-201ENST00000381033 GLI2P10070 1586 aa23.07■■□□□ 1.28
PDX1-201ENST00000381033 PIK3C2GO75747 1445 aa23.06■■□□□ 1.28
PDX1-201ENST00000381033 PPLO60437 1756 aa23.06■■□□□ 1.28
PDX1-201ENST00000381033 MYOM1P52179 1685 aa23.06■■□□□ 1.28
PDX1-201ENST00000381033 CDCA8Q53HL2 280 aa23.06■■□□□ 1.28
PDX1-201ENST00000381033 SMG6Q86US8 1419 aaKnown RBP23.05■■□□□ 1.28
PDX1-201ENST00000381033 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
PDX1-201ENST00000381033 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
PDX1-201ENST00000381033 MLECQ14165 292 aa23.03■■□□□ 1.28
PDX1-201ENST00000381033 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
PDX1-201ENST00000381033 SAFB2Q14151 953 aaKnown RBP eCLIP23.01■■□□□ 1.27
PDX1-201ENST00000381033 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
PDX1-201ENST00000381033 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
PDX1-201ENST00000381033 B4GALNT3Q6L9W6 998 aa22.99■■□□□ 1.27
PDX1-201ENST00000381033 ADGRB1O14514 1584 aa22.99■■□□□ 1.27
PDX1-201ENST00000381033 KDM5AP29375 1690 aaKnown RBP22.99■■□□□ 1.27
PDX1-201ENST00000381033 PIK3C2BO00750 1634 aa22.99■■□□□ 1.27
PDX1-201ENST00000381033 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
PDX1-201ENST00000381033 RPGRIP1LQ68CZ1 1315 aa22.97■■□□□ 1.27
PDX1-201ENST00000381033 MYO5BQ9ULV0 1848 aa22.97■■□□□ 1.27
PDX1-201ENST00000381033 STK26Q9P289 416 aa22.97■■□□□ 1.27
PDX1-201ENST00000381033 NEXMIFQ5QGS0 1516 aa22.96■■□□□ 1.27
PDX1-201ENST00000381033 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
PDX1-201ENST00000381033 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
PDX1-201ENST00000381033 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.27
PDX1-201ENST00000381033 SETBP1Q9Y6X0 1596 aa22.93■■□□□ 1.26
PDX1-201ENST00000381033 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
PDX1-201ENST00000381033 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
PDX1-201ENST00000381033 ZMYM4Q5VZL5 1548 aa22.92■■□□□ 1.26
PDX1-201ENST00000381033 PREX1Q8TCU6 1659 aa22.91■■□□□ 1.26
PDX1-201ENST00000381033 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
PDX1-201ENST00000381033 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
PDX1-201ENST00000381033 TNNT2P45379 298 aaPredicted RBP22.9■■□□□ 1.26
PDX1-201ENST00000381033 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
PDX1-201ENST00000381033 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
PDX1-201ENST00000381033 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.25
PDX1-201ENST00000381033 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
PDX1-201ENST00000381033 BLMP54132 1417 aaPredicted RBP22.87■■□□□ 1.25
PDX1-201ENST00000381033 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
PDX1-201ENST00000381033 CCDC146Q8IYE0 955 aa22.87■■□□□ 1.25
PDX1-201ENST00000381033 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
PDX1-201ENST00000381033 WDR43Q15061 677 aaKnown RBP eCLIP22.86■■□□□ 1.25
PDX1-201ENST00000381033 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
PDX1-201ENST00000381033 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
PDX1-201ENST00000381033 NSD3Q9BZ95 1437 aa22.83■■□□□ 1.25
PDX1-201ENST00000381033 KIF13AQ9H1H9 1805 aa22.83■■□□□ 1.25
PDX1-201ENST00000381033 CLTCQ00610 1675 aaKnown RBP22.82■■□□□ 1.24
PDX1-201ENST00000381033 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
PDX1-201ENST00000381033 RCAN3Q9UKA8 241 aa22.81■■□□□ 1.24
PDX1-201ENST00000381033 PLEKHH1Q9ULM0 1364 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms