RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
EIF3CL-201ENST00000380876 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
EIF3CL-201ENST00000380876 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
EIF3CL-201ENST00000380876 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
EIF3CL-201ENST00000380876 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
EIF3CL-201ENST00000380876 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
EIF3CL-201ENST00000380876 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
EIF3CL-201ENST00000380876 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
EIF3CL-201ENST00000380876 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
EIF3CL-201ENST00000380876 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
EIF3CL-201ENST00000380876 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
EIF3CL-201ENST00000380876 E9PSI1 815 aa17.23■□□□□ 0.35
EIF3CL-201ENST00000380876 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
EIF3CL-201ENST00000380876 PLEKHH2Q8IVE3 1493 aa17.22■□□□□ 0.35
EIF3CL-201ENST00000380876 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
EIF3CL-201ENST00000380876 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
EIF3CL-201ENST00000380876 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
EIF3CL-201ENST00000380876 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
EIF3CL-201ENST00000380876 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
EIF3CL-201ENST00000380876 CGNL1Q0VF96 1302 aa17.2■□□□□ 0.34
EIF3CL-201ENST00000380876 MCM4P33991 863 aa17.19■□□□□ 0.34
EIF3CL-201ENST00000380876 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
EIF3CL-201ENST00000380876 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
EIF3CL-201ENST00000380876 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
EIF3CL-201ENST00000380876 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
EIF3CL-201ENST00000380876 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
EIF3CL-201ENST00000380876 CROCC2H7BZ55 1655 aa17.18■□□□□ 0.34
EIF3CL-201ENST00000380876 GPRASP1Q5JY77 1395 aa17.18■□□□□ 0.34
EIF3CL-201ENST00000380876 TRAK2O60296 914 aa17.18■□□□□ 0.34
EIF3CL-201ENST00000380876 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
EIF3CL-201ENST00000380876 CARD14Q9BXL6 1004 aa17.16■□□□□ 0.34
EIF3CL-201ENST00000380876 PTPRGP23470 1445 aa17.15■□□□□ 0.34
EIF3CL-201ENST00000380876 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
EIF3CL-201ENST00000380876 PKNOX2Q96KN3 472 aa17.15■□□□□ 0.34
EIF3CL-201ENST00000380876 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
EIF3CL-201ENST00000380876 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
EIF3CL-201ENST00000380876 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
EIF3CL-201ENST00000380876 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
EIF3CL-201ENST00000380876 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
EIF3CL-201ENST00000380876 ATP10BO94823 1461 aa17.13■□□□□ 0.33
EIF3CL-201ENST00000380876 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
EIF3CL-201ENST00000380876 PRDM15P57071 1507 aaPredicted RBP17.13■□□□□ 0.33
EIF3CL-201ENST00000380876 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 TCP11L2Q8N4U5 519 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 ZMYND15Q9H091 742 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
EIF3CL-201ENST00000380876 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
EIF3CL-201ENST00000380876 INSRP06213 1382 aa17.11■□□□□ 0.33
EIF3CL-201ENST00000380876 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
EIF3CL-201ENST00000380876 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
EIF3CL-201ENST00000380876 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
EIF3CL-201ENST00000380876 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
EIF3CL-201ENST00000380876 FSD2A1L4K1 749 aa17.09■□□□□ 0.33
EIF3CL-201ENST00000380876 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
EIF3CL-201ENST00000380876 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
EIF3CL-201ENST00000380876 CDCA8Q53HL2 280 aa17.08■□□□□ 0.33
EIF3CL-201ENST00000380876 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.32
EIF3CL-201ENST00000380876 CHMP5Q9NZZ3 219 aa17.08■□□□□ 0.32
EIF3CL-201ENST00000380876 MORC1Q86VD1 984 aa17.07■□□□□ 0.32
EIF3CL-201ENST00000380876 CARMIL2Q6F5E8 1435 aa17.07■□□□□ 0.32
EIF3CL-201ENST00000380876 CLCN1P35523 988 aa17.07■□□□□ 0.32
EIF3CL-201ENST00000380876 GAS2L3Q86XJ1 694 aa17.07■□□□□ 0.32
EIF3CL-201ENST00000380876 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
EIF3CL-201ENST00000380876 CCDC141Q6ZP82 1450 aa17.06■□□□□ 0.32
EIF3CL-201ENST00000380876 SHANK2Q9UPX8 1470 aa17.06■□□□□ 0.32
EIF3CL-201ENST00000380876 GLIPR1L2Q4G1C9 344 aa17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 TRIM44Q96DX7 344 aaPredicted RBP17.05■□□□□ 0.32
EIF3CL-201ENST00000380876 ESPNB1AK53 854 aa17.04■□□□□ 0.32
EIF3CL-201ENST00000380876 ARID3AQ99856 593 aa17.04■□□□□ 0.32
EIF3CL-201ENST00000380876 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
EIF3CL-201ENST00000380876 MRE11P49959 708 aa17.03■□□□□ 0.32
EIF3CL-201ENST00000380876 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
EIF3CL-201ENST00000380876 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
EIF3CL-201ENST00000380876 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
EIF3CL-201ENST00000380876 MTHFSP49914 203 aa17.02■□□□□ 0.32
EIF3CL-201ENST00000380876 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.32
EIF3CL-201ENST00000380876 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.31
EIF3CL-201ENST00000380876 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.31
EIF3CL-201ENST00000380876 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
EIF3CL-201ENST00000380876 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
EIF3CL-201ENST00000380876 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
EIF3CL-201ENST00000380876 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
EIF3CL-201ENST00000380876 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
EIF3CL-201ENST00000380876 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
EIF3CL-201ENST00000380876 DZIP1LQ8IYY4 767 aaKnown RBP17■□□□□ 0.31
EIF3CL-201ENST00000380876 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
EIF3CL-201ENST00000380876 SAMD9LQ8IVG5 1584 aa17■□□□□ 0.31
EIF3CL-201ENST00000380876 ADGRF5Q8IZF2 1346 aa16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 ZKSCAN2Q63HK3 967 aa16.98■□□□□ 0.31
EIF3CL-201ENST00000380876 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms