RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 VPS37DQ86XT2 251 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 GAS2L2Q8NHY3 880 aa8.82□□□□□ -1
CCDC171-201ENST00000380701 REC8O95072 547 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 ZNF692Q9BU19 519 aaPredicted RBP8.81□□□□□ -1
CCDC171-201ENST00000380701 HMGXB3Q12766 1538 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 TPM3P06753 285 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 SF3A1Q15459 793 aaKnown RBP8.81□□□□□ -1
CCDC171-201ENST00000380701 PNISRQ8TF01 805 aaKnown RBP8.81□□□□□ -1
CCDC171-201ENST00000380701 PANK3Q9H999 370 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 USP47Q96K76 1375 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 TRDNQ13061 729 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 DIAPH3Q9NSV4 1193 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 ST20-MTHFSA0A0A6YYL1 179 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 FGD6Q6ZV73 1430 aa8.81□□□□□ -1
CCDC171-201ENST00000380701 PRG4Q92954 1404 aaPredicted RBP8.81□□□□□ -1
CCDC171-201ENST00000380701 TRIM29Q14134 588 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 HOOK1Q9UJC3 728 aaKnown RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 CFTRP13569 1480 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 ERC2O15083 957 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 G3BP1Q13283 466 aaKnown RBP eCLIP8.8□□□□□ -1
CCDC171-201ENST00000380701 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 TPM1P09493 284 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 NOC3LQ8WTT2 800 aaKnown RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 CWC22Q9HCG8 908 aaKnown RBP8.8□□□□□ -1
CCDC171-201ENST00000380701 ARHGAP5Q13017 1502 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 KIF21BO75037 1637 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 ANKLE2Q86XL3 938 aa8.8□□□□□ -1
CCDC171-201ENST00000380701 CENPQQ7L2Z9 268 aaPredicted RBP8.79□□□□□ -1
CCDC171-201ENST00000380701 ERICH3Q5RHP9 1530 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 NUTM2DQ5VT03 806 aaPredicted RBP8.79□□□□□ -1
CCDC171-201ENST00000380701 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
CCDC171-201ENST00000380701 VPS53Q5VIR6 699 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 PPP6R1Q9UPN7 881 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 ERICH2A1L162 156 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 TXNDC2Q86VQ3 553 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 ANKRD20A12PQ8NF67 263 aa8.79□□□□□ -1
CCDC171-201ENST00000380701 RUNDC1Q96C34 613 aa8.78□□□□□ -1
CCDC171-201ENST00000380701 DMRT2Q9Y5R5 561 aa8.78□□□□□ -1
CCDC171-201ENST00000380701 TPRNQ4KMQ1 711 aa8.78□□□□□ -1
CCDC171-201ENST00000380701 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
CCDC171-201ENST00000380701 NUTM2FA1L443 756 aa8.77□□□□□ -1
CCDC171-201ENST00000380701 H3BQV1 296 aa8.77□□□□□ -1
CCDC171-201ENST00000380701 IFFO2Q5TF58 517 aa8.77□□□□□ -1
CCDC171-201ENST00000380701 DAPK1P53355 1430 aa8.77□□□□□ -1.01
CCDC171-201ENST00000380701 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
CCDC171-201ENST00000380701 CNTLNQ9NXG0 1405 aa8.76□□□□□ -1.01
CCDC171-201ENST00000380701 ANKRD30BQ9BXX2 1392 aa8.76□□□□□ -1.01
CCDC171-201ENST00000380701 CCDC7Q96M83 1385 aa8.76□□□□□ -1.01
CCDC171-201ENST00000380701 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-201ENST00000380701 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.01
CCDC171-201ENST00000380701 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-201ENST00000380701 PHF23Q9BUL5 403 aaPredicted RBP8.76□□□□□ -1.01
CCDC171-201ENST00000380701 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
CCDC171-201ENST00000380701 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CCDC171-201ENST00000380701 NLRP6P59044 892 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 CCDC43Q96MW1 224 aaKnown RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 CPLX1O14810 134 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 SLC3A2P08195 630 aaKnown RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 GNAI3P08754 354 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 SYTL4Q96C24 671 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 SAFBQ15424 915 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 GNL3LQ9NVN8 582 aaKnown RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 XBP1P17861 261 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 TPD52L1Q16890 204 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 KIF6Q6ZMV9 814 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 TROQ12816 1431 aaPredicted RBP8.75□□□□□ -1.01
CCDC171-201ENST00000380701 HIP1O00291 1037 aa8.75□□□□□ -1.01
CCDC171-201ENST00000380701 TSPYL4Q9UJ04 414 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 ERC1Q8IUD2 1116 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 CCDC70Q6NSX1 233 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 BRMS1Q9HCU9 246 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 TBC1D2BQ9UPU7 963 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 IPO7O95373 1038 aaKnown RBP8.74□□□□□ -1.01
CCDC171-201ENST00000380701 RIPK4P57078 832 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 FKBP5Q13451 457 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-201ENST00000380701 EHBP1L1Q8N3D4 1523 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
CCDC171-201ENST00000380701 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
CCDC171-201ENST00000380701 RIC3Q7Z5B4 369 aa8.73□□□□□ -1.01
CCDC171-201ENST00000380701 CT47B1P0C2W7 299 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-201ENST00000380701 SART3Q15020 963 aaKnown RBP8.73□□□□□ -1.01
CCDC171-201ENST00000380701 CCDC146Q8IYE0 955 aa8.73□□□□□ -1.01
CCDC171-201ENST00000380701 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
CCDC171-201ENST00000380701 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
CCDC171-201ENST00000380701 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
CCDC171-201ENST00000380701 ZBED9Q6R2W3 1325 aa8.72□□□□□ -1.01
CCDC171-201ENST00000380701 EIF2S2P20042 333 aaKnown RBP8.72□□□□□ -1.01
CCDC171-201ENST00000380701 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
CCDC171-201ENST00000380701 RALYLQ86SE5 291 aaKnown RBP8.72□□□□□ -1.01
CCDC171-201ENST00000380701 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
CCDC171-201ENST00000380701 NAP1L5Q96NT1 182 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-201ENST00000380701 LRRC9Q6ZRR7 1453 aa8.72□□□□□ -1.01
CCDC171-201ENST00000380701 KIAA0586Q9BVV6 1533 aa8.72□□□□□ -1.01
CCDC171-201ENST00000380701 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.01
CCDC171-201ENST00000380701 PRKRIP1Q9H875 184 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 397.6 ms