RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 DDX11Q96FC9 970 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 LRRC43Q8N309 656 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 CNKSR2Q8WXI2 1034 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 PPP4R2Q9NY27 417 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 TSPY2A6NKD2 308 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 VIMP08670 466 aaKnown RBP5.79□□□□□ -1.48
PTCD2-202ENST00000380639 TSPY3P0CV98 308 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 TSPY8P0CW00 308 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 TSPY1Q01534 308 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 SMARCE1Q969G3 411 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 ZCRB1Q8TBF4 217 aaKnown RBP5.79□□□□□ -1.48
PTCD2-202ENST00000380639 DDX11L8A8MPP1 907 aa5.79□□□□□ -1.48
PTCD2-202ENST00000380639 SMC2O95347 1197 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 CSPP1Q1MSJ5 1256 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 KIAA1328Q86T90 577 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 INF2Q27J81 1249 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 GTPBP4Q9BZE4 634 aaKnown RBP5.78□□□□□ -1.48
PTCD2-202ENST00000380639 SMC6Q96SB8 1091 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 PDILTQ8N807 584 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 PLEKHD1A6NEE1 506 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 CT47B1P0C2W7 299 aaPredicted RBP5.78□□□□□ -1.48
PTCD2-202ENST00000380639 NEUROD2Q15784 382 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 FOSL2P15408 326 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 MIPOL1Q8TD10 442 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 ERCC4Q92889 916 aaPredicted RBP5.78□□□□□ -1.48
PTCD2-202ENST00000380639 CDK5RAP3Q96JB5 506 aa5.78□□□□□ -1.48
PTCD2-202ENST00000380639 BCL11BQ9C0K0 894 aaPredicted RBP5.78□□□□□ -1.48
PTCD2-202ENST00000380639 CCDC160A6NGH7 325 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 RRP9O43818 475 aaKnown RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 MAP7D1Q3KQU3 841 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 RAD21O60216 631 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 TPD52L1Q16890 204 aaPredicted RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 RFC1P35251 1148 aaPredicted RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 TBC1D10BQ4KMP7 808 aaPredicted RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC97Q96F63 343 aaPredicted RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 IQCGQ9H095 443 aaKnown RBP5.77□□□□□ -1.49
PTCD2-202ENST00000380639 CEP135Q66GS9 1140 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 ATP6V1E2Q96A05 226 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 A0A0G2JS52 829 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 ANKRD18AQ8IVF6 992 aa5.77□□□□□ -1.49
PTCD2-202ENST00000380639 PDE1CQ14123 709 aaPredicted RBP5.76□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC6Q16204 474 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 POTEB3A0JP26 581 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 POTEBQ6S5H4 581 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 ZBTB41Q5SVQ8 909 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 BICD1Q96G01 975 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 RBM19Q9Y4C8 960 aaKnown RBP5.76□□□□□ -1.49
PTCD2-202ENST00000380639 FERP16591 822 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 TIGD1Q96MW7 591 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 NISCHQ9Y2I1 1504 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 TERF1P54274 439 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.76□□□□□ -1.49
PTCD2-202ENST00000380639 KIAA1211Q6ZU35 1233 aa5.76□□□□□ -1.49
PTCD2-202ENST00000380639 TRIM55Q9BYV6 548 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 TTC36A6NLP5 189 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 POLD1P28340 1107 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 SLC26A8Q96RN1 970 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 RBBP5Q15291 538 aaKnown RBP5.75□□□□□ -1.49
PTCD2-202ENST00000380639 HSP90AB2PQ58FF8 381 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 NUP133Q8WUM0 1156 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 SYCP1Q15431 976 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 LIG1P18858 919 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 SHQ1Q6PI26 577 aaKnown RBP5.75□□□□□ -1.49
PTCD2-202ENST00000380639 STAMBPO95630 424 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC146Q8IYE0 955 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 SREK1Q8WXA9 508 aaKnown RBP5.75□□□□□ -1.49
PTCD2-202ENST00000380639 RNF8O76064 485 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 ZBTB17Q13105 803 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 CEP120Q8N960 986 aa5.75□□□□□ -1.49
PTCD2-202ENST00000380639 MCCP23508 829 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
PTCD2-202ENST00000380639 TRIM52Q96A61 297 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 IFT57Q9NWB7 429 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 MORC4Q8TE76 937 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 CACTINQ8WUQ7 758 aaKnown RBP5.74□□□□□ -1.49
PTCD2-202ENST00000380639 MRE11P49959 708 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 FAM184AQ8NB25 1140 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 RBM33Q96EV2 1170 aaKnown RBP5.74□□□□□ -1.49
PTCD2-202ENST00000380639 PRDM10Q9NQV6 1147 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 TRIM34Q9BYJ4 488 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 GIMAP4Q9NUV9 329 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 ERC1Q8IUD2 1116 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 UBE2Q2Q8WVN8 375 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 CCDC152Q4G0S7 254 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 ODF2Q5BJF6 829 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 GCOM1H8Y6P7 765 aaPredicted RBP5.74□□□□□ -1.49
PTCD2-202ENST00000380639 IPO7O95373 1038 aaKnown RBP5.74□□□□□ -1.49
PTCD2-202ENST00000380639 MYZAPP0CAP1 466 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 BANK1Q8NDB2 785 aa5.74□□□□□ -1.49
PTCD2-202ENST00000380639 PPM1FP49593 454 aaPredicted RBP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 TRIM29Q14134 588 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 DHX8Q14562 1220 aaKnown RBP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 V9GYY5 206 aaPredicted RBP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 SH2D4BQ5SQS7 431 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 NOL3O60936 208 aaKnown RBP5.73□□□□□ -1.49
PTCD2-202ENST00000380639 CFAP58Q5T655 872 aa5.73□□□□□ -1.49
PTCD2-202ENST00000380639 PDCD7Q8N8D1 485 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms