RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
PTCHD1-201ENST00000379361 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
PTCHD1-201ENST00000379361 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
PTCHD1-201ENST00000379361 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
PTCHD1-201ENST00000379361 ARGLU1Q9NWB6 273 aaPredicted RBP13.6□□□□□ -0.23
PTCHD1-201ENST00000379361 COG3Q96JB2 828 aa13.6□□□□□ -0.23
PTCHD1-201ENST00000379361 ZNF592Q92610 1267 aa13.6□□□□□ -0.23
PTCHD1-201ENST00000379361 XBP1P17861 261 aa13.6□□□□□ -0.23
PTCHD1-201ENST00000379361 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 SLC3A2P08195 630 aaKnown RBP13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
PTCHD1-201ENST00000379361 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.23
PTCHD1-201ENST00000379361 FOXD4L5Q5VV16 416 aaPredicted RBP13.58□□□□□ -0.23
PTCHD1-201ENST00000379361 FOXD4L4Q8WXT5 416 aaPredicted RBP13.58□□□□□ -0.23
PTCHD1-201ENST00000379361 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.24
PTCHD1-201ENST00000379361 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
PTCHD1-201ENST00000379361 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
PTCHD1-201ENST00000379361 SYCP1Q15431 976 aa13.58□□□□□ -0.24
PTCHD1-201ENST00000379361 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
PTCHD1-201ENST00000379361 ERLIN2O94905 339 aa13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 TEFQ10587 303 aa13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
PTCHD1-201ENST00000379361 REC8O95072 547 aa13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 CCDC97Q96F63 343 aaPredicted RBP13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 WASHC2CQ9Y4E1 1318 aa13.56□□□□□ -0.24
PTCHD1-201ENST00000379361 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 CHMP5Q9NZZ3 219 aa13.55□□□□□ -0.24
PTCHD1-201ENST00000379361 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CDK5RAP3Q96JB5 506 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 BICD2Q8TD16 824 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CCDC27Q2M243 656 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
PTCHD1-201ENST00000379361 NACADO15069 1562 aa13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 HSP90AB4PQ58FF6 505 aa13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 GOLGA6L10A6NI86 522 aa13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 TIMELESSQ9UNS1 1208 aa13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
PTCHD1-201ENST00000379361 TXLNAP40222 546 aa13.52□□□□□ -0.24
PTCHD1-201ENST00000379361 CCP110O43303 1012 aa13.52□□□□□ -0.24
PTCHD1-201ENST00000379361 ERC2O15083 957 aa13.52□□□□□ -0.25
PTCHD1-201ENST00000379361 H0YHG0 523 aa13.51□□□□□ -0.25
PTCHD1-201ENST00000379361 PPM1FP49593 454 aaPredicted RBP13.51□□□□□ -0.25
PTCHD1-201ENST00000379361 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
PTCHD1-201ENST00000379361 PSME1Q06323 249 aa13.51□□□□□ -0.25
PTCHD1-201ENST00000379361 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
PTCHD1-201ENST00000379361 PKD2Q13563 968 aa13.5□□□□□ -0.25
PTCHD1-201ENST00000379361 LUC7LQ9NQ29 371 aaKnown RBP13.5□□□□□ -0.25
PTCHD1-201ENST00000379361 NEBLO76041 1014 aa13.5□□□□□ -0.25
PTCHD1-201ENST00000379361 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
PTCHD1-201ENST00000379361 SASS6Q6UVJ0 657 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 SETD5Q9C0A6 1442 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 PDE3BQ13370 1112 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 SMARCE1Q969G3 411 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 ATF3P18847 181 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 NUMA1Q14980 2115 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
PTCHD1-201ENST00000379361 NEFHP12036 1026 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 FOXD4L6Q3SYB3 417 aaPredicted RBP13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 FOXD4L3Q6VB84 417 aaPredicted RBP13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 GOLGA6L7A0A1B0GV03 622 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 FYB1O15117 783 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
PTCHD1-201ENST00000379361 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 FEZ1Q99689 392 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 EVC2Q86UK5 1308 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 GRIPAP1Q4V328 841 aa13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
PTCHD1-201ENST00000379361 SIN3AQ96ST3 1273 aa13.46□□□□□ -0.25
PTCHD1-201ENST00000379361 FMN1Q68DA7 1419 aa13.46□□□□□ -0.25
PTCHD1-201ENST00000379361 SEPT11Q9NVA2 429 aaKnown RBP13.46□□□□□ -0.25
PTCHD1-201ENST00000379361 WDHD1O75717 1129 aaPredicted RBP13.46□□□□□ -0.26
PTCHD1-201ENST00000379361 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.46□□□□□ -0.26
PTCHD1-201ENST00000379361 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms