RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 EFCAB6Q5THR3 1501 aa21.21■□□□□ 0.99
PCNA-202ENST00000379160 ANKRD50Q9ULJ7 1429 aa21.2■□□□□ 0.98
PCNA-202ENST00000379160 KDM5AP29375 1690 aaKnown RBP21.18■□□□□ 0.98
PCNA-202ENST00000379160 NOS1P29475 1434 aa21.17■□□□□ 0.98
PCNA-202ENST00000379160 ADGRB3O60242 1522 aa21.13■□□□□ 0.97
PCNA-202ENST00000379160 SLC52A1Q9NWF4 448 aa21.13■□□□□ 0.97
PCNA-202ENST00000379160 XIRP1Q702N8 1843 aaKnown RBP21.13■□□□□ 0.97
PCNA-202ENST00000379160 MED1Q15648 1581 aaPredicted RBP21.13■□□□□ 0.97
PCNA-202ENST00000379160 SLC26A8Q96RN1 970 aa21.12■□□□□ 0.97
PCNA-202ENST00000379160 RPRD2Q5VT52 1461 aaKnown RBP21.11■□□□□ 0.97
PCNA-202ENST00000379160 TET3O43151 1660 aa21.11■□□□□ 0.97
PCNA-202ENST00000379160 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
PCNA-202ENST00000379160 BCANQ96GW7 911 aa21.1■□□□□ 0.97
PCNA-202ENST00000379160 MYO5BQ9ULV0 1848 aa21.08■□□□□ 0.97
PCNA-202ENST00000379160 UNC13BO14795 1591 aa21.08■□□□□ 0.96
PCNA-202ENST00000379160 ITGAEP38570 1179 aa21.08■□□□□ 0.96
PCNA-202ENST00000379160 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
PCNA-202ENST00000379160 KCNA6P17658 529 aa21.07■□□□□ 0.96
PCNA-202ENST00000379160 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
PCNA-202ENST00000379160 TMEM94Q12767 1356 aa21.06■□□□□ 0.96
PCNA-202ENST00000379160 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
PCNA-202ENST00000379160 PROSER2Q86WR7 435 aaPredicted RBP21.04■□□□□ 0.96
PCNA-202ENST00000379160 E9PCH4 1651 aa21.03■□□□□ 0.96
PCNA-202ENST00000379160 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
PCNA-202ENST00000379160 TMEM131LA2VDJ0 1609 aa21.03■□□□□ 0.96
PCNA-202ENST00000379160 ZFYVE9O95405 1425 aa21.02■□□□□ 0.96
PCNA-202ENST00000379160 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
PCNA-202ENST00000379160 MYCNP04198 464 aaPredicted RBP21.02■□□□□ 0.96
PCNA-202ENST00000379160 RIMS2Q9UQ26 1411 aa21.02■□□□□ 0.95
PCNA-202ENST00000379160 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
PCNA-202ENST00000379160 ZBTB22O15209 634 aa21■□□□□ 0.95
PCNA-202ENST00000379160 HDGFP51858 240 aaKnown RBP20.99■□□□□ 0.95
PCNA-202ENST00000379160 RNF39Q9H2S5 420 aa20.99■□□□□ 0.95
PCNA-202ENST00000379160 NUP155O75694 1391 aa20.99■□□□□ 0.95
PCNA-202ENST00000379160 PLEKHG1Q9ULL1 1385 aa20.99■□□□□ 0.95
PCNA-202ENST00000379160 NWD1Q149M9 1564 aa20.99■□□□□ 0.95
PCNA-202ENST00000379160 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
PCNA-202ENST00000379160 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
PCNA-202ENST00000379160 FAM135BQ49AJ0 1406 aa20.97■□□□□ 0.95
PCNA-202ENST00000379160 CHD2O14647 1828 aaKnown RBP20.95■□□□□ 0.94
PCNA-202ENST00000379160 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.94■□□□□ 0.94
PCNA-202ENST00000379160 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
PCNA-202ENST00000379160 ROBO1Q9Y6N7 1651 aa20.94■□□□□ 0.94
PCNA-202ENST00000379160 MSH6P52701 1360 aa20.92■□□□□ 0.94
PCNA-202ENST00000379160 TBX22Q9Y458 520 aa20.91■□□□□ 0.94
PCNA-202ENST00000379160 ADAMTS13Q76LX8 1427 aa20.88■□□□□ 0.93
PCNA-202ENST00000379160 C1QBPQ07021 282 aaKnown RBP20.87■□□□□ 0.93
PCNA-202ENST00000379160 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
PCNA-202ENST00000379160 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
PCNA-202ENST00000379160 C14orf37Q86TY3 774 aa20.85■□□□□ 0.93
PCNA-202ENST00000379160 DIP2AQ14689 1571 aa20.85■□□□□ 0.93
PCNA-202ENST00000379160 SAMD1Q6SPF0 538 aaPredicted RBP20.84■□□□□ 0.93
PCNA-202ENST00000379160 RGS17Q9UGC6 210 aaPredicted RBP20.84■□□□□ 0.93
PCNA-202ENST00000379160 RRBP1Q9P2E9 1410 aaKnown RBP20.82■□□□□ 0.92
PCNA-202ENST00000379160 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
PCNA-202ENST00000379160 PHLPP1O60346 1717 aa20.81■□□□□ 0.92
PCNA-202ENST00000379160 TRPM2O94759 1503 aa20.81■□□□□ 0.92
PCNA-202ENST00000379160 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
PCNA-202ENST00000379160 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
PCNA-202ENST00000379160 AMOTL2Q9Y2J4 779 aa20.8■□□□□ 0.92
PCNA-202ENST00000379160 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
PCNA-202ENST00000379160 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
PCNA-202ENST00000379160 NAIPQ13075 1403 aa20.77■□□□□ 0.92
PCNA-202ENST00000379160 NRXN3Q9Y4C0 1643 aa20.77■□□□□ 0.92
PCNA-202ENST00000379160 ATF3P18847 181 aa20.77■□□□□ 0.92
PCNA-202ENST00000379160 C19orf44Q9H6X5 657 aa20.77■□□□□ 0.92
PCNA-202ENST00000379160 CADPS2Q86UW7 1296 aa20.76■□□□□ 0.91
PCNA-202ENST00000379160 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
PCNA-202ENST00000379160 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
PCNA-202ENST00000379160 JCADQ9P266 1359 aa20.74■□□□□ 0.91
PCNA-202ENST00000379160 COL16A1Q07092 1604 aaPredicted RBP20.73■□□□□ 0.91
PCNA-202ENST00000379160 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
PCNA-202ENST00000379160 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
PCNA-202ENST00000379160 KIF1BO60333 1816 aa20.72■□□□□ 0.91
PCNA-202ENST00000379160 METP08581 1390 aa20.71■□□□□ 0.91
PCNA-202ENST00000379160 XRN1Q8IZH2 1706 aaKnown RBP20.71■□□□□ 0.91
PCNA-202ENST00000379160 NEXMIFQ5QGS0 1516 aa20.71■□□□□ 0.91
PCNA-202ENST00000379160 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
PCNA-202ENST00000379160 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
PCNA-202ENST00000379160 ATXN8OSP0DMR3 200 aa20.67■□□□□ 0.9
PCNA-202ENST00000379160 BRINP3Q76B58 766 aa20.66■□□□□ 0.9
PCNA-202ENST00000379160 DCCP43146 1447 aa20.65■□□□□ 0.9
PCNA-202ENST00000379160 SPATA31A6Q5VVP1 1343 aa20.63■□□□□ 0.89
PCNA-202ENST00000379160 LRP6O75581 1613 aa20.63■□□□□ 0.89
PCNA-202ENST00000379160 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
PCNA-202ENST00000379160 MST1RQ04912 1400 aa20.62■□□□□ 0.89
PCNA-202ENST00000379160 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
PCNA-202ENST00000379160 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
PCNA-202ENST00000379160 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
PCNA-202ENST00000379160 NALCNQ8IZF0 1738 aa20.6■□□□□ 0.89
PCNA-202ENST00000379160 ADGRL3Q9HAR2 1447 aa20.59■□□□□ 0.89
PCNA-202ENST00000379160 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.88
PCNA-202ENST00000379160 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
PCNA-202ENST00000379160 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
PCNA-202ENST00000379160 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
PCNA-202ENST00000379160 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
PCNA-202ENST00000379160 DDX17Q92841 729 aaKnown RBP20.56■□□□□ 0.88
PCNA-202ENST00000379160 PPLO60437 1756 aa20.55■□□□□ 0.88
PCNA-202ENST00000379160 NHSL1Q5SYE7 1610 aa20.55■□□□□ 0.88
PCNA-202ENST00000379160 ROBO2Q9HCK4 1378 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms