RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 AMPHP49418 695 aa16.14■□□□□ 0.17
HIPK3-202ENST00000379016 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.17
HIPK3-202ENST00000379016 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
HIPK3-202ENST00000379016 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
HIPK3-202ENST00000379016 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
HIPK3-202ENST00000379016 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
HIPK3-202ENST00000379016 ARGLU1Q9NWB6 273 aaPredicted RBP16.13■□□□□ 0.17
HIPK3-202ENST00000379016 CCDC27Q2M243 656 aa16.13■□□□□ 0.17
HIPK3-202ENST00000379016 TRDNQ13061 729 aa16.12■□□□□ 0.17
HIPK3-202ENST00000379016 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
HIPK3-202ENST00000379016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
HIPK3-202ENST00000379016 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
HIPK3-202ENST00000379016 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
HIPK3-202ENST00000379016 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
HIPK3-202ENST00000379016 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
HIPK3-202ENST00000379016 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
HIPK3-202ENST00000379016 PSMD1Q99460 953 aa16.1■□□□□ 0.17
HIPK3-202ENST00000379016 CENPHQ9H3R5 247 aa16.1■□□□□ 0.17
HIPK3-202ENST00000379016 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
HIPK3-202ENST00000379016 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
HIPK3-202ENST00000379016 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
HIPK3-202ENST00000379016 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
HIPK3-202ENST00000379016 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
HIPK3-202ENST00000379016 CWC15Q9P013 229 aaKnown RBP16.1■□□□□ 0.17
HIPK3-202ENST00000379016 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
HIPK3-202ENST00000379016 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
HIPK3-202ENST00000379016 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
HIPK3-202ENST00000379016 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
HIPK3-202ENST00000379016 DIAPH3Q9NSV4 1193 aa16.09■□□□□ 0.17
HIPK3-202ENST00000379016 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
HIPK3-202ENST00000379016 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
HIPK3-202ENST00000379016 HSP90AB4PQ58FF6 505 aa16.08■□□□□ 0.16
HIPK3-202ENST00000379016 KANK1Q14678 1352 aa16.07■□□□□ 0.16
HIPK3-202ENST00000379016 CHMP4CQ96CF2 233 aa16.07■□□□□ 0.16
HIPK3-202ENST00000379016 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
HIPK3-202ENST00000379016 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
HIPK3-202ENST00000379016 ERLIN2O94905 339 aa16.06■□□□□ 0.16
HIPK3-202ENST00000379016 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
HIPK3-202ENST00000379016 RSPH6AQ9H0K4 717 aa16.06■□□□□ 0.16
HIPK3-202ENST00000379016 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
HIPK3-202ENST00000379016 C1orf141Q5JVX7 400 aa16.06■□□□□ 0.16
HIPK3-202ENST00000379016 MATR3P43243 847 aaKnown RBP eCLIP16.06■□□□□ 0.16
HIPK3-202ENST00000379016 SAFBQ15424 915 aaKnown RBP eCLIP16.06■□□□□ 0.16
HIPK3-202ENST00000379016 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
HIPK3-202ENST00000379016 GOLGA6L10A0A0M3HER8 536 aa16.05■□□□□ 0.16
HIPK3-202ENST00000379016 GOLGA6L10A6NI86 522 aa16.05■□□□□ 0.16
HIPK3-202ENST00000379016 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
HIPK3-202ENST00000379016 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
HIPK3-202ENST00000379016 DDX23Q9BUQ8 820 aaKnown RBP16.04■□□□□ 0.16
HIPK3-202ENST00000379016 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
HIPK3-202ENST00000379016 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
HIPK3-202ENST00000379016 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
HIPK3-202ENST00000379016 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
HIPK3-202ENST00000379016 CEP63Q96MT8 703 aa16.03■□□□□ 0.16
HIPK3-202ENST00000379016 C9orf78Q9NZ63 289 aaPredicted RBP16.03■□□□□ 0.16
HIPK3-202ENST00000379016 PLIN1O60240 522 aa16.03■□□□□ 0.16
HIPK3-202ENST00000379016 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
HIPK3-202ENST00000379016 ATP2B2Q01814 1243 aa16.03■□□□□ 0.16
HIPK3-202ENST00000379016 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
HIPK3-202ENST00000379016 TTC16Q8NEE8 873 aa16.03■□□□□ 0.16
HIPK3-202ENST00000379016 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
HIPK3-202ENST00000379016 ERCC6Q03468 1493 aa16.02■□□□□ 0.16
HIPK3-202ENST00000379016 INCENPQ9NQS7 918 aa16.02■□□□□ 0.16
HIPK3-202ENST00000379016 RRP7AQ9Y3A4 280 aaKnown RBP16.02■□□□□ 0.16
HIPK3-202ENST00000379016 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.15
HIPK3-202ENST00000379016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.15
HIPK3-202ENST00000379016 BRMS1Q9HCU9 246 aa16.02■□□□□ 0.15
HIPK3-202ENST00000379016 GOLGA6L7A0A1B0GV03 622 aa16.01■□□□□ 0.15
HIPK3-202ENST00000379016 KIAA0754O94854 1291 aa16.01■□□□□ 0.15
HIPK3-202ENST00000379016 CHMP4BP1P59074 171 aa16.01■□□□□ 0.15
HIPK3-202ENST00000379016 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
HIPK3-202ENST00000379016 MAGEC2Q9UBF1 373 aaPredicted RBP16.01■□□□□ 0.15
HIPK3-202ENST00000379016 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
HIPK3-202ENST00000379016 CLIP1P30622 1438 aa16■□□□□ 0.15
HIPK3-202ENST00000379016 FAM193AP78312 1265 aa16■□□□□ 0.15
HIPK3-202ENST00000379016 SSR1P43307 286 aaKnown RBP15.99■□□□□ 0.15
HIPK3-202ENST00000379016 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
HIPK3-202ENST00000379016 TMEM87AQ8NBN3 555 aa15.99■□□□□ 0.15
HIPK3-202ENST00000379016 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
HIPK3-202ENST00000379016 GIMAP7Q8NHV1 300 aa15.98■□□□□ 0.15
HIPK3-202ENST00000379016 ZKSCAN1P17029 563 aaPredicted RBP15.98■□□□□ 0.15
HIPK3-202ENST00000379016 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
HIPK3-202ENST00000379016 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
HIPK3-202ENST00000379016 ATP2B1P20020 1258 aa15.98■□□□□ 0.15
HIPK3-202ENST00000379016 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
HIPK3-202ENST00000379016 CHMP5Q9NZZ3 219 aa15.98■□□□□ 0.15
HIPK3-202ENST00000379016 CBX1P83916 185 aa15.97■□□□□ 0.15
HIPK3-202ENST00000379016 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
HIPK3-202ENST00000379016 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
HIPK3-202ENST00000379016 RALBP1Q15311 655 aa15.97■□□□□ 0.15
HIPK3-202ENST00000379016 DNAJC2Q99543 621 aaKnown RBP15.96■□□□□ 0.15
HIPK3-202ENST00000379016 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
HIPK3-202ENST00000379016 SMC2O95347 1197 aa15.96■□□□□ 0.15
HIPK3-202ENST00000379016 KTN1Q86UP2 1357 aaKnown RBP15.96■□□□□ 0.15
HIPK3-202ENST00000379016 TAF3Q5VWG9 929 aa15.96■□□□□ 0.15
HIPK3-202ENST00000379016 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.14
HIPK3-202ENST00000379016 MPHOSPH10O00566 681 aaKnown RBP15.95■□□□□ 0.14
HIPK3-202ENST00000379016 ANAPC15P60006 121 aa15.95■□□□□ 0.14
HIPK3-202ENST00000379016 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
HIPK3-202ENST00000379016 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms