RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
RAB3IP-204ENST00000378815 SCAF11Q99590 1463 aaKnown RBP21.29■■□□□ 1
RAB3IP-204ENST00000378815 CHGAP10645 457 aaKnown RBP21.29■■□□□ 1
RAB3IP-204ENST00000378815 PRKRIP1Q9H875 184 aaPredicted RBP21.28■■□□□ 1
RAB3IP-204ENST00000378815 SLC52A1Q9NWF4 448 aa21.27■■□□□ 1
RAB3IP-204ENST00000378815 PREX1Q8TCU6 1659 aa21.27■□□□□ 0.99
RAB3IP-204ENST00000378815 PPLO60437 1756 aa21.26■□□□□ 0.99
RAB3IP-204ENST00000378815 IDI1Q13907 227 aa21.24■□□□□ 0.99
RAB3IP-204ENST00000378815 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
RAB3IP-204ENST00000378815 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
RAB3IP-204ENST00000378815 PIK3C2GO75747 1445 aa21.23■□□□□ 0.99
RAB3IP-204ENST00000378815 ERVK-7P63135 1459 aa21.23■□□□□ 0.99
RAB3IP-204ENST00000378815 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
RAB3IP-204ENST00000378815 TMF1P82094 1093 aa21.21■□□□□ 0.99
RAB3IP-204ENST00000378815 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
RAB3IP-204ENST00000378815 EIF3AQ14152 1382 aaKnown RBP21.2■□□□□ 0.98
RAB3IP-204ENST00000378815 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
RAB3IP-204ENST00000378815 NEXMIFQ5QGS0 1516 aa21.2■□□□□ 0.98
RAB3IP-204ENST00000378815 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
RAB3IP-204ENST00000378815 C14orf93Q9H972 538 aaKnown RBP21.18■□□□□ 0.98
RAB3IP-204ENST00000378815 TMEM131LA2VDJ0 1609 aa21.17■□□□□ 0.98
RAB3IP-204ENST00000378815 MLECQ14165 292 aa21.17■□□□□ 0.98
RAB3IP-204ENST00000378815 ZFYVE9O95405 1425 aa21.16■□□□□ 0.98
RAB3IP-204ENST00000378815 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
RAB3IP-204ENST00000378815 SPATA31D1Q6ZQQ2 1576 aa21.16■□□□□ 0.98
RAB3IP-204ENST00000378815 ADGRB1O14514 1584 aa21.14■□□□□ 0.97
RAB3IP-204ENST00000378815 CCDC184Q52MB2 194 aa21.13■□□□□ 0.97
RAB3IP-204ENST00000378815 CDCA8Q53HL2 280 aa21.1■□□□□ 0.97
RAB3IP-204ENST00000378815 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
RAB3IP-204ENST00000378815 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
RAB3IP-204ENST00000378815 MYO5BQ9ULV0 1848 aa21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 ZMYM3Q14202 1370 aa21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
RAB3IP-204ENST00000378815 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
RAB3IP-204ENST00000378815 SBNO2Q9Y2G9 1366 aa21.08■□□□□ 0.97
RAB3IP-204ENST00000378815 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.96
RAB3IP-204ENST00000378815 MRS2Q9HD23 443 aa21.08■□□□□ 0.96
RAB3IP-204ENST00000378815 PANK3Q9H999 370 aa21.05■□□□□ 0.96
RAB3IP-204ENST00000378815 A2ML1A8K2U0 1454 aa21.04■□□□□ 0.96
RAB3IP-204ENST00000378815 RALBP1Q15311 655 aa21.04■□□□□ 0.96
RAB3IP-204ENST00000378815 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
RAB3IP-204ENST00000378815 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
RAB3IP-204ENST00000378815 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
RAB3IP-204ENST00000378815 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
RAB3IP-204ENST00000378815 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
RAB3IP-204ENST00000378815 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
RAB3IP-204ENST00000378815 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
RAB3IP-204ENST00000378815 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
RAB3IP-204ENST00000378815 MYBBP1AQ9BQG0 1328 aaKnown RBP20.99■□□□□ 0.95
RAB3IP-204ENST00000378815 MYOM1P52179 1685 aa20.99■□□□□ 0.95
RAB3IP-204ENST00000378815 TNRQ92752 1358 aa20.97■□□□□ 0.95
RAB3IP-204ENST00000378815 QRICH2Q9H0J4 1663 aa20.97■□□□□ 0.95
RAB3IP-204ENST00000378815 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
RAB3IP-204ENST00000378815 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
RAB3IP-204ENST00000378815 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
RAB3IP-204ENST00000378815 RIMS2Q9UQ26 1411 aa20.96■□□□□ 0.95
RAB3IP-204ENST00000378815 BRD4O60885 1362 aaPredicted RBP20.96■□□□□ 0.95
RAB3IP-204ENST00000378815 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.95
RAB3IP-204ENST00000378815 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
RAB3IP-204ENST00000378815 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
RAB3IP-204ENST00000378815 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
RAB3IP-204ENST00000378815 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
RAB3IP-204ENST00000378815 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
RAB3IP-204ENST00000378815 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
RAB3IP-204ENST00000378815 YTHDC2Q9H6S0 1430 aaKnown RBP20.9■□□□□ 0.94
RAB3IP-204ENST00000378815 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.94
RAB3IP-204ENST00000378815 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.89■□□□□ 0.94
RAB3IP-204ENST00000378815 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
RAB3IP-204ENST00000378815 PTPRMP28827 1452 aa20.89■□□□□ 0.93
RAB3IP-204ENST00000378815 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
RAB3IP-204ENST00000378815 NPC1L1Q9UHC9 1359 aa20.88■□□□□ 0.93
RAB3IP-204ENST00000378815 STK26Q9P289 416 aa20.87■□□□□ 0.93
RAB3IP-204ENST00000378815 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
RAB3IP-204ENST00000378815 TULP4Q9NRJ4 1543 aa20.86■□□□□ 0.93
RAB3IP-204ENST00000378815 UBR1Q8IWV7 1749 aa20.86■□□□□ 0.93
RAB3IP-204ENST00000378815 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
RAB3IP-204ENST00000378815 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
RAB3IP-204ENST00000378815 SETD1AO15047 1707 aaKnown RBP20.85■□□□□ 0.93
RAB3IP-204ENST00000378815 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
RAB3IP-204ENST00000378815 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
RAB3IP-204ENST00000378815 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
RAB3IP-204ENST00000378815 NRXN3Q9Y4C0 1643 aa20.84■□□□□ 0.93
RAB3IP-204ENST00000378815 C3P01024 1663 aa20.84■□□□□ 0.93
RAB3IP-204ENST00000378815 FER1L4A9Z1Z3 1794 aa20.84■□□□□ 0.93
RAB3IP-204ENST00000378815 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
RAB3IP-204ENST00000378815 CARD14Q9BXL6 1004 aa20.83■□□□□ 0.93
RAB3IP-204ENST00000378815 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
RAB3IP-204ENST00000378815 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
RAB3IP-204ENST00000378815 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
RAB3IP-204ENST00000378815 SLC12A5Q9H2X9 1139 aa20.79■□□□□ 0.92
RAB3IP-204ENST00000378815 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
RAB3IP-204ENST00000378815 POGKQ9P215 609 aa20.78■□□□□ 0.92
RAB3IP-204ENST00000378815 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
RAB3IP-204ENST00000378815 METP08581 1390 aa20.76■□□□□ 0.91
RAB3IP-204ENST00000378815 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
RAB3IP-204ENST00000378815 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
RAB3IP-204ENST00000378815 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms