RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CFAP70Q5T0N1 1121 aa26.73■■□□□ 1.87
SSU72-204ENST00000378726 SLC52A1Q9NWF4 448 aa26.73■■□□□ 1.87
SSU72-204ENST00000378726 MROH2AA6NES4 1674 aa26.73■■□□□ 1.87
SSU72-204ENST00000378726 RPGRIP1LQ68CZ1 1315 aa26.72■■□□□ 1.87
SSU72-204ENST00000378726 PRKRIP1Q9H875 184 aaPredicted RBP26.71■■□□□ 1.87
SSU72-204ENST00000378726 SYNMO15061 1565 aa26.7■■□□□ 1.86
SSU72-204ENST00000378726 FBXO31Q5XUX0 539 aaPredicted RBP26.7■■□□□ 1.86
SSU72-204ENST00000378726 ARHGEF40Q8TER5 1519 aa26.67■■□□□ 1.86
SSU72-204ENST00000378726 IFT172Q9UG01 1749 aa26.66■■□□□ 1.86
SSU72-204ENST00000378726 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
SSU72-204ENST00000378726 TMF1P82094 1093 aa26.66■■□□□ 1.86
SSU72-204ENST00000378726 TSHZ2Q9NRE2 1034 aa26.66■■□□□ 1.86
SSU72-204ENST00000378726 PIK3C2BO00750 1634 aa26.66■■□□□ 1.86
SSU72-204ENST00000378726 NRXN1Q9ULB1 1477 aa26.65■■□□□ 1.86
SSU72-204ENST00000378726 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
SSU72-204ENST00000378726 KIAA1210Q9ULL0 1709 aa26.64■■□□□ 1.86
SSU72-204ENST00000378726 DISP3Q9P2K9 1392 aa26.63■■□□□ 1.85
SSU72-204ENST00000378726 PREX1Q8TCU6 1659 aa26.61■■□□□ 1.85
SSU72-204ENST00000378726 VGFO15240 615 aaPredicted RBP26.61■■□□□ 1.85
SSU72-204ENST00000378726 C14orf93Q9H972 538 aaKnown RBP26.61■■□□□ 1.85
SSU72-204ENST00000378726 NUTM2DQ5VT03 806 aaPredicted RBP26.6■■□□□ 1.85
SSU72-204ENST00000378726 ESF1Q9H501 851 aaKnown RBP26.6■■□□□ 1.85
SSU72-204ENST00000378726 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
SSU72-204ENST00000378726 PPLO60437 1756 aa26.58■■□□□ 1.85
SSU72-204ENST00000378726 CNGB1Q14028 1251 aaPredicted RBP26.58■■□□□ 1.85
SSU72-204ENST00000378726 ERVK-7P63135 1459 aa26.57■■□□□ 1.84
SSU72-204ENST00000378726 PIK3C2GO75747 1445 aa26.57■■□□□ 1.84
SSU72-204ENST00000378726 EIF3AQ14152 1382 aaKnown RBP26.57■■□□□ 1.84
SSU72-204ENST00000378726 CLTCQ00610 1675 aaKnown RBP26.57■■□□□ 1.84
SSU72-204ENST00000378726 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
SSU72-204ENST00000378726 BCANQ96GW7 911 aa26.54■■□□□ 1.84
SSU72-204ENST00000378726 STAG3Q9UJ98 1225 aa26.53■■□□□ 1.84
SSU72-204ENST00000378726 NEXMIFQ5QGS0 1516 aa26.52■■□□□ 1.84
SSU72-204ENST00000378726 FKBP8Q14318 412 aa26.52■■□□□ 1.84
SSU72-204ENST00000378726 ZMYM3Q14202 1370 aa26.51■■□□□ 1.84
SSU72-204ENST00000378726 CDCA8Q53HL2 280 aa26.51■■□□□ 1.83
SSU72-204ENST00000378726 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
SSU72-204ENST00000378726 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
SSU72-204ENST00000378726 MRS2Q9HD23 443 aa26.5■■□□□ 1.83
SSU72-204ENST00000378726 TMEM131LA2VDJ0 1609 aa26.5■■□□□ 1.83
SSU72-204ENST00000378726 SETBP1Q9Y6X0 1596 aa26.48■■□□□ 1.83
SSU72-204ENST00000378726 PER1O15534 1290 aaPredicted RBP26.48■■□□□ 1.83
SSU72-204ENST00000378726 PANK3Q9H999 370 aa26.48■■□□□ 1.83
SSU72-204ENST00000378726 TRAK1Q9UPV9 953 aa26.48■■□□□ 1.83
SSU72-204ENST00000378726 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
SSU72-204ENST00000378726 SPATA31D1Q6ZQQ2 1576 aa26.46■■□□□ 1.83
SSU72-204ENST00000378726 ADGRB1O14514 1584 aa26.43■■□□□ 1.82
SSU72-204ENST00000378726 MYO5BQ9ULV0 1848 aa26.43■■□□□ 1.82
SSU72-204ENST00000378726 CENPJQ9HC77 1338 aaPredicted RBP26.42■■□□□ 1.82
SSU72-204ENST00000378726 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
SSU72-204ENST00000378726 SENP3Q9H4L4 574 aaPredicted RBP26.42■■□□□ 1.82
SSU72-204ENST00000378726 RALBP1Q15311 655 aa26.42■■□□□ 1.82
SSU72-204ENST00000378726 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
SSU72-204ENST00000378726 KTN1Q86UP2 1357 aaKnown RBP26.39■■□□□ 1.82
SSU72-204ENST00000378726 A2ML1A8K2U0 1454 aa26.37■■□□□ 1.81
SSU72-204ENST00000378726 SBNO2Q9Y2G9 1366 aa26.36■■□□□ 1.81
SSU72-204ENST00000378726 HNRNPUQ00839 825 aaKnown RBP eCLIP26.36■■□□□ 1.81
SSU72-204ENST00000378726 MYBBP1AQ9BQG0 1328 aaKnown RBP26.34■■□□□ 1.81
SSU72-204ENST00000378726 MYO3AQ8NEV4 1616 aa26.33■■□□□ 1.81
SSU72-204ENST00000378726 NEFLP07196 543 aa26.33■■□□□ 1.8
SSU72-204ENST00000378726 CC2D1BQ5T0F9 858 aaKnown RBP26.33■■□□□ 1.8
SSU72-204ENST00000378726 TMC1Q8TDI8 760 aa26.33■■□□□ 1.8
SSU72-204ENST00000378726 TNRQ92752 1358 aa26.32■■□□□ 1.8
SSU72-204ENST00000378726 STK26Q9P289 416 aa26.31■■□□□ 1.8
SSU72-204ENST00000378726 KNSTRNQ9Y448 316 aa26.31■■□□□ 1.8
SSU72-204ENST00000378726 PARD3Q8TEW0 1356 aa26.3■■□□□ 1.8
SSU72-204ENST00000378726 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
SSU72-204ENST00000378726 CEBPAP49715 358 aaPredicted RBP26.29■■□□□ 1.8
SSU72-204ENST00000378726 KDM5AP29375 1690 aaKnown RBP26.27■■□□□ 1.8
SSU72-204ENST00000378726 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
SSU72-204ENST00000378726 BRD4O60885 1362 aaPredicted RBP26.25■■□□□ 1.79
SSU72-204ENST00000378726 PNISRQ8TF01 805 aaKnown RBP26.25■■□□□ 1.79
SSU72-204ENST00000378726 HDGFP51858 240 aaKnown RBP26.24■■□□□ 1.79
SSU72-204ENST00000378726 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
SSU72-204ENST00000378726 ASXL1Q8IXJ9 1541 aa26.24■■□□□ 1.79
SSU72-204ENST00000378726 ALKQ9UM73 1620 aa26.23■■□□□ 1.79
SSU72-204ENST00000378726 SAFB2Q14151 953 aaKnown RBP eCLIP26.23■■□□□ 1.79
SSU72-204ENST00000378726 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
SSU72-204ENST00000378726 AMER1Q5JTC6 1135 aaPredicted RBP26.22■■□□□ 1.79
SSU72-204ENST00000378726 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
SSU72-204ENST00000378726 ANP32EQ9BTT0 268 aa26.21■■□□□ 1.79
SSU72-204ENST00000378726 EVC2Q86UK5 1308 aa26.21■■□□□ 1.79
SSU72-204ENST00000378726 MYOM1P52179 1685 aa26.2■■□□□ 1.79
SSU72-204ENST00000378726 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
SSU72-204ENST00000378726 ARHGEF28Q8N1W1 1705 aaKnown RBP26.19■■□□□ 1.78
SSU72-204ENST00000378726 POGKQ9P215 609 aa26.19■■□□□ 1.78
SSU72-204ENST00000378726 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
SSU72-204ENST00000378726 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
SSU72-204ENST00000378726 CARD14Q9BXL6 1004 aa26.17■■□□□ 1.78
SSU72-204ENST00000378726 SLC12A5Q9H2X9 1139 aa26.16■■□□□ 1.78
SSU72-204ENST00000378726 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
SSU72-204ENST00000378726 PTPRMP28827 1452 aa26.14■■□□□ 1.77
SSU72-204ENST00000378726 CABP2Q9NPB3 220 aa26.13■■□□□ 1.77
SSU72-204ENST00000378726 NLRP1Q9C000 1473 aa26.13■■□□□ 1.77
SSU72-204ENST00000378726 NPC1L1Q9UHC9 1359 aa26.13■■□□□ 1.77
SSU72-204ENST00000378726 RBM19Q9Y4C8 960 aaKnown RBP26.12■■□□□ 1.77
SSU72-204ENST00000378726 MINK1Q8N4C8 1332 aaPredicted RBP26.11■■□□□ 1.77
SSU72-204ENST00000378726 ZBED9Q6R2W3 1325 aa26.11■■□□□ 1.77
SSU72-204ENST00000378726 UBR1Q8IWV7 1749 aa26.1■■□□□ 1.77
SSU72-204ENST00000378726 TULP4Q9NRJ4 1543 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms