RNA–Protein interactions for RNA: ENST00000378593.6

AFF4-202, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-202ENST00000378593 ZNF454Q8N9F8 522 aa9.19□□□□□ -0.94
AFF4-202ENST00000378593 ERBB3P21860 1342 aa9.18□□□□□ -0.94
AFF4-202ENST00000378593 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
AFF4-202ENST00000378593 CDCA7LQ96GN5 454 aa9.18□□□□□ -0.94
AFF4-202ENST00000378593 SNRKQ9NRH2 765 aa9.18□□□□□ -0.94
AFF4-202ENST00000378593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.17□□□□□ -0.94
AFF4-202ENST00000378593 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
AFF4-202ENST00000378593 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
AFF4-202ENST00000378593 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
AFF4-202ENST00000378593 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
AFF4-202ENST00000378593 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
AFF4-202ENST00000378593 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
AFF4-202ENST00000378593 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.94
AFF4-202ENST00000378593 HOXB1P14653 301 aaPredicted RBP9.15□□□□□ -0.94
AFF4-202ENST00000378593 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
AFF4-202ENST00000378593 SPTLC1O15269 473 aa9.14□□□□□ -0.95
AFF4-202ENST00000378593 HOXB3P14651 431 aaPredicted RBP9.14□□□□□ -0.95
AFF4-202ENST00000378593 CD46P15529 392 aa9.14□□□□□ -0.95
AFF4-202ENST00000378593 EYA1Q99502 592 aa9.14□□□□□ -0.95
AFF4-202ENST00000378593 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
AFF4-202ENST00000378593 SOCS7O14512 581 aa9.13□□□□□ -0.95
AFF4-202ENST00000378593 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
AFF4-202ENST00000378593 NUDT7P0C024 238 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 GJA5P36382 358 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
AFF4-202ENST00000378593 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
AFF4-202ENST00000378593 ARSIQ5FYB1 569 aa9.11□□□□□ -0.95
AFF4-202ENST00000378593 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
AFF4-202ENST00000378593 ZSWIM6Q9HCJ5 1215 aa9.11□□□□□ -0.95
AFF4-202ENST00000378593 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
AFF4-202ENST00000378593 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
AFF4-202ENST00000378593 VARS2Q5ST30 1063 aaKnown RBP9.09□□□□□ -0.95
AFF4-202ENST00000378593 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
AFF4-202ENST00000378593 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
AFF4-202ENST00000378593 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.952e-9■■□□□ 11.9
AFF4-202ENST00000378593 LILRB3O75022 631 aa9.08□□□□□ -0.96
AFF4-202ENST00000378593 COL9A1P20849 921 aa9.08□□□□□ -0.96
AFF4-202ENST00000378593 GDPD2Q9HCC8 539 aa9.08□□□□□ -0.96
AFF4-202ENST00000378593 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 RIMBP2O15034 1052 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 DNAJB2P25686 324 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 ZNF710Q8N1W2 664 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 BCL2L12Q9HB09 334 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 PRM3Q9NNZ6 103 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 TSKSQ9UJT2 592 aa9.07□□□□□ -0.96
AFF4-202ENST00000378593 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
AFF4-202ENST00000378593 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
AFF4-202ENST00000378593 TMEM134Q9H6X4 195 aa9.06□□□□□ -0.96
AFF4-202ENST00000378593 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 QPCTQ16769 361 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 ZNF687Q8N1G0 1237 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
AFF4-202ENST00000378593 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
AFF4-202ENST00000378593 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
AFF4-202ENST00000378593 NDUFV2P19404 249 aa9.04□□□□□ -0.96
AFF4-202ENST00000378593 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
AFF4-202ENST00000378593 TATDN2Q93075 761 aa9.04□□□□□ -0.96
AFF4-202ENST00000378593 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
AFF4-202ENST00000378593 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
AFF4-202ENST00000378593 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
AFF4-202ENST00000378593 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
AFF4-202ENST00000378593 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
AFF4-202ENST00000378593 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
AFF4-202ENST00000378593 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.97
AFF4-202ENST00000378593 AP1G2O75843 785 aa9.02□□□□□ -0.97
AFF4-202ENST00000378593 PTPREP23469 700 aa9.02□□□□□ -0.97
AFF4-202ENST00000378593 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
AFF4-202ENST00000378593 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
AFF4-202ENST00000378593 ABL2P42684 1182 aa9.01□□□□□ -0.97
AFF4-202ENST00000378593 CALR3Q96L12 384 aaKnown RBP9.01□□□□□ -0.97
AFF4-202ENST00000378593 PNMA3Q9UL41 463 aa9.01□□□□□ -0.97
AFF4-202ENST00000378593 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
AFF4-202ENST00000378593 NUTM2BA6NNL0 878 aaPredicted RBP9□□□□□ -0.97
AFF4-202ENST00000378593 NUTM2EB1AL46 878 aaPredicted RBP9□□□□□ -0.97
AFF4-202ENST00000378593 KDM4AO75164 1064 aa9□□□□□ -0.97
AFF4-202ENST00000378593 USP46P62068 366 aa9□□□□□ -0.97
AFF4-202ENST00000378593 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
AFF4-202ENST00000378593 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
AFF4-202ENST00000378593 USP17L8P0C7I0 530 aa8.99□□□□□ -0.97
AFF4-202ENST00000378593 RETREG2Q8NC44 543 aa8.99□□□□□ -0.97
AFF4-202ENST00000378593 POM121CA8CG34 1229 aa8.98□□□□□ -0.97
AFF4-202ENST00000378593 GCGRP47871 477 aa8.98□□□□□ -0.97
AFF4-202ENST00000378593 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
AFF4-202ENST00000378593 GLMNQ92990 594 aa8.98□□□□□ -0.97
AFF4-202ENST00000378593 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
AFF4-202ENST00000378593 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
AFF4-202ENST00000378593 RSPH4AQ5TD94 716 aa8.97□□□□□ -0.97
AFF4-202ENST00000378593 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
AFF4-202ENST00000378593 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
AFF4-202ENST00000378593 GJD4Q96KN9 370 aaPredicted RBP8.97□□□□□ -0.97
AFF4-202ENST00000378593 HOXA2O43364 376 aa8.95□□□□□ -0.98
AFF4-202ENST00000378593 PDE4CQ08493 712 aa8.95□□□□□ -0.98
AFF4-202ENST00000378593 AEBP1Q8IUX7 1158 aa8.95□□□□□ -0.98
AFF4-202ENST00000378593 NDUFB9Q9Y6M9 179 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms