RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 MTERF4Q7Z6M4 381 aaKnown RBP13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 RPRD2Q5VT52 1461 aaKnown RBP13.11□□□□□ -0.31
ARHGEF39-201ENST00000378387 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
ARHGEF39-201ENST00000378387 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
ARHGEF39-201ENST00000378387 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
ARHGEF39-201ENST00000378387 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
ARHGEF39-201ENST00000378387 PRPF40AO75400 957 aaKnown RBP13.09□□□□□ -0.31
ARHGEF39-201ENST00000378387 PTMSP20962 102 aa13.09□□□□□ -0.31
ARHGEF39-201ENST00000378387 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
ARHGEF39-201ENST00000378387 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
ARHGEF39-201ENST00000378387 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
ARHGEF39-201ENST00000378387 CGNQ9P2M7 1197 aaKnown RBP13.08□□□□□ -0.32
ARHGEF39-201ENST00000378387 NOL8Q76FK4 1167 aaKnown RBP13.07□□□□□ -0.32
ARHGEF39-201ENST00000378387 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF39-201ENST00000378387 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
ARHGEF39-201ENST00000378387 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
ARHGEF39-201ENST00000378387 APBB1O00213 710 aa13.06□□□□□ -0.32
ARHGEF39-201ENST00000378387 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF39-201ENST00000378387 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
ARHGEF39-201ENST00000378387 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 ANKRD45Q5TZF3 282 aa13.05□□□□□ -0.32
ARHGEF39-201ENST00000378387 DYNC1I1O14576 645 aa13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 SASS6Q6UVJ0 657 aa13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 SENP3Q9H4L4 574 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 SYCE3A1L190 88 aa13.04□□□□□ -0.32
ARHGEF39-201ENST00000378387 RLBP1P12271 317 aa13.03□□□□□ -0.32
ARHGEF39-201ENST00000378387 PER1O15534 1290 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF39-201ENST00000378387 CCDC39Q9UFE4 941 aa13.03□□□□□ -0.32
ARHGEF39-201ENST00000378387 NAP1L2Q9ULW6 460 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF39-201ENST00000378387 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.32
ARHGEF39-201ENST00000378387 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
ARHGEF39-201ENST00000378387 DZIP1LQ8IYY4 767 aaKnown RBP13.02□□□□□ -0.33
ARHGEF39-201ENST00000378387 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
ARHGEF39-201ENST00000378387 ZKSCAN2Q63HK3 967 aa13.01□□□□□ -0.33
ARHGEF39-201ENST00000378387 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF39-201ENST00000378387 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF39-201ENST00000378387 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
ARHGEF39-201ENST00000378387 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
ARHGEF39-201ENST00000378387 RBSNQ9H1K0 784 aa13□□□□□ -0.33
ARHGEF39-201ENST00000378387 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
ARHGEF39-201ENST00000378387 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
ARHGEF39-201ENST00000378387 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF39-201ENST00000378387 KLHL40Q2TBA0 621 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 NOL7Q9UMY1 257 aaKnown RBP12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 C17orf53Q8N3J3 647 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
ARHGEF39-201ENST00000378387 GAS2L2Q8NHY3 880 aa12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 TCP11L2Q8N4U5 519 aa12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
ARHGEF39-201ENST00000378387 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
ARHGEF39-201ENST00000378387 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
ARHGEF39-201ENST00000378387 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
ARHGEF39-201ENST00000378387 NUCB2P80303 420 aa12.96□□□□□ -0.34
ARHGEF39-201ENST00000378387 DMTNQ08495 405 aa12.95□□□□□ -0.34
ARHGEF39-201ENST00000378387 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
ARHGEF39-201ENST00000378387 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF39-201ENST00000378387 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
ARHGEF39-201ENST00000378387 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
ARHGEF39-201ENST00000378387 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 ERICH4A6NGS2 130 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 ZBTB22O15209 634 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 KDM6BO15054 1643 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 TTC12Q9H892 705 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 ANKRD30AQ9BXX3 1397 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 ELL2O00472 640 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 KCNJ4P48050 445 aa12.94□□□□□ -0.34
ARHGEF39-201ENST00000378387 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
ARHGEF39-201ENST00000378387 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms