RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.19
USP9X-202ENST00000378308 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.19
USP9X-202ENST00000378308 RALBP1Q15311 655 aa16.27■□□□□ 0.19
USP9X-202ENST00000378308 CCDC27Q2M243 656 aa16.27■□□□□ 0.19
USP9X-202ENST00000378308 AK7Q96M32 723 aa16.26■□□□□ 0.19
USP9X-202ENST00000378308 EEA1Q15075 1411 aa16.26■□□□□ 0.19
USP9X-202ENST00000378308 MAP7D2Q96T17 732 aa16.25■□□□□ 0.19
USP9X-202ENST00000378308 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
USP9X-202ENST00000378308 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
USP9X-202ENST00000378308 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
USP9X-202ENST00000378308 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
USP9X-202ENST00000378308 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
USP9X-202ENST00000378308 KIF3BO15066 747 aa16.24■□□□□ 0.19
USP9X-202ENST00000378308 NUP155O75694 1391 aa16.24■□□□□ 0.19
USP9X-202ENST00000378308 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
USP9X-202ENST00000378308 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
USP9X-202ENST00000378308 PSME1Q06323 249 aa16.23■□□□□ 0.19
USP9X-202ENST00000378308 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
USP9X-202ENST00000378308 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
USP9X-202ENST00000378308 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
USP9X-202ENST00000378308 SKIDA1Q1XH10 827 aa16.22■□□□□ 0.19
USP9X-202ENST00000378308 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
USP9X-202ENST00000378308 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
USP9X-202ENST00000378308 COG3Q96JB2 828 aa16.21■□□□□ 0.19
USP9X-202ENST00000378308 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
USP9X-202ENST00000378308 ZKSCAN1P17029 563 aaPredicted RBP16.2■□□□□ 0.18
USP9X-202ENST00000378308 CDR1P51861 262 aa16.2■□□□□ 0.18
USP9X-202ENST00000378308 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
USP9X-202ENST00000378308 OFD1O75665 1012 aa16.2■□□□□ 0.18
USP9X-202ENST00000378308 CCDC173Q0VFZ6 552 aa16.2■□□□□ 0.18
USP9X-202ENST00000378308 PLIN1O60240 522 aa16.19■□□□□ 0.18
USP9X-202ENST00000378308 KDM4AO75164 1064 aa16.19■□□□□ 0.18
USP9X-202ENST00000378308 SAFBQ15424 915 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP9X-202ENST00000378308 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
USP9X-202ENST00000378308 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
USP9X-202ENST00000378308 BRMS1Q9HCU9 246 aa16.18■□□□□ 0.18
USP9X-202ENST00000378308 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
USP9X-202ENST00000378308 DDX58O95786 925 aaKnown RBP16.16■□□□□ 0.18
USP9X-202ENST00000378308 CUX2O14529 1486 aa16.16■□□□□ 0.18
USP9X-202ENST00000378308 RNF20Q5VTR2 975 aa16.16■□□□□ 0.18
USP9X-202ENST00000378308 SASS6Q6UVJ0 657 aa16.16■□□□□ 0.18
USP9X-202ENST00000378308 CCDC97Q96F63 343 aaPredicted RBP16.15■□□□□ 0.18
USP9X-202ENST00000378308 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.178e-7■■■□□ 15.8
USP9X-202ENST00000378308 PDILTQ8N807 584 aa16.14■□□□□ 0.17
USP9X-202ENST00000378308 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
USP9X-202ENST00000378308 CCER2I3L3R5 266 aa16.14■□□□□ 0.17
USP9X-202ENST00000378308 PPM1FP49593 454 aaPredicted RBP16.14■□□□□ 0.17
USP9X-202ENST00000378308 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
USP9X-202ENST00000378308 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
USP9X-202ENST00000378308 SYCP1Q15431 976 aa16.13■□□□□ 0.17
USP9X-202ENST00000378308 NEFHP12036 1026 aa16.13■□□□□ 0.17
USP9X-202ENST00000378308 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
USP9X-202ENST00000378308 HNRNPMP52272 730 aaKnown RBP eCLIP16.13■□□□□ 0.178e-8■■■■□ 21.1
USP9X-202ENST00000378308 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
USP9X-202ENST00000378308 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
USP9X-202ENST00000378308 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
USP9X-202ENST00000378308 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
USP9X-202ENST00000378308 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
USP9X-202ENST00000378308 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
USP9X-202ENST00000378308 REC8O95072 547 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 ATP2B2Q01814 1243 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 XBP1P17861 261 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
USP9X-202ENST00000378308 ANKRD62A6NC57 917 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 SKOR2Q2VWA4 1001 aaPredicted RBP16.11■□□□□ 0.17
USP9X-202ENST00000378308 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
USP9X-202ENST00000378308 AIMP1Q12904 312 aaKnown RBP16.1■□□□□ 0.17
USP9X-202ENST00000378308 IFT57Q9NWB7 429 aa16.1■□□□□ 0.17
USP9X-202ENST00000378308 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
USP9X-202ENST00000378308 PLCD4Q9BRC7 762 aa16.09■□□□□ 0.17
USP9X-202ENST00000378308 HSP90B2PQ58FF3 399 aa16.09■□□□□ 0.17
USP9X-202ENST00000378308 ACBD3Q9H3P7 528 aa16.09■□□□□ 0.17
USP9X-202ENST00000378308 ATF3P18847 181 aa16.09■□□□□ 0.17
USP9X-202ENST00000378308 IBSPP21815 317 aaPredicted RBP16.09■□□□□ 0.17
USP9X-202ENST00000378308 SEPT7Q16181 437 aaKnown RBP16.09■□□□□ 0.17
USP9X-202ENST00000378308 RIC3Q7Z5B4 369 aa16.09■□□□□ 0.17
USP9X-202ENST00000378308 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
USP9X-202ENST00000378308 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
USP9X-202ENST00000378308 FAM177BA6PVY3 158 aa16.08■□□□□ 0.16
USP9X-202ENST00000378308 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
USP9X-202ENST00000378308 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
USP9X-202ENST00000378308 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
USP9X-202ENST00000378308 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
USP9X-202ENST00000378308 SMC3Q9UQE7 1217 aa16.07■□□□□ 0.16
USP9X-202ENST00000378308 H0YHG0 523 aa16.07■□□□□ 0.16
USP9X-202ENST00000378308 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
USP9X-202ENST00000378308 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
USP9X-202ENST00000378308 EVC2Q86UK5 1308 aa16.06■□□□□ 0.16
USP9X-202ENST00000378308 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
USP9X-202ENST00000378308 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
USP9X-202ENST00000378308 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
USP9X-202ENST00000378308 ARGLU1Q9NWB6 273 aaPredicted RBP16.05■□□□□ 0.16
USP9X-202ENST00000378308 BRPF1P55201 1214 aaPredicted RBP16.05■□□□□ 0.16
USP9X-202ENST00000378308 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
USP9X-202ENST00000378308 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
USP9X-202ENST00000378308 MATR3P43243 847 aaKnown RBP eCLIP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms