RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 TPM1P09493 284 aa18.25■□□□□ 0.51
EXT1-201ENST00000378204 RDXP35241 583 aaKnown RBP18.25■□□□□ 0.51
EXT1-201ENST00000378204 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
EXT1-201ENST00000378204 COG3Q96JB2 828 aa18.25■□□□□ 0.51
EXT1-201ENST00000378204 ZBED9Q6R2W3 1325 aa18.25■□□□□ 0.51
EXT1-201ENST00000378204 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
EXT1-201ENST00000378204 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
EXT1-201ENST00000378204 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
EXT1-201ENST00000378204 REC8O95072 547 aa18.23■□□□□ 0.51
EXT1-201ENST00000378204 PDE4AP27815 886 aa18.23■□□□□ 0.51
EXT1-201ENST00000378204 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
EXT1-201ENST00000378204 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
EXT1-201ENST00000378204 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
EXT1-201ENST00000378204 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
EXT1-201ENST00000378204 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
EXT1-201ENST00000378204 TEFQ10587 303 aa18.22■□□□□ 0.51
EXT1-201ENST00000378204 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
EXT1-201ENST00000378204 RRP1P56182 461 aaKnown RBP18.22■□□□□ 0.51
EXT1-201ENST00000378204 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
EXT1-201ENST00000378204 ELL2O00472 640 aaPredicted RBP18.2■□□□□ 0.5
EXT1-201ENST00000378204 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
EXT1-201ENST00000378204 CCDC70Q6NSX1 233 aa18.2■□□□□ 0.5
EXT1-201ENST00000378204 USP47Q96K76 1375 aa18.19■□□□□ 0.5
EXT1-201ENST00000378204 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
EXT1-201ENST00000378204 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
EXT1-201ENST00000378204 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
EXT1-201ENST00000378204 PATL2C9JE40 543 aaKnown RBP18.18■□□□□ 0.5
EXT1-201ENST00000378204 ROCK1Q13464 1354 aa18.18■□□□□ 0.5
EXT1-201ENST00000378204 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
EXT1-201ENST00000378204 MCTP1Q6DN14 999 aa18.18■□□□□ 0.5
EXT1-201ENST00000378204 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
EXT1-201ENST00000378204 PLIN1O60240 522 aa18.17■□□□□ 0.5
EXT1-201ENST00000378204 FOXD4L6Q3SYB3 417 aaPredicted RBP18.17■□□□□ 0.5
EXT1-201ENST00000378204 FOXD4L3Q6VB84 417 aaPredicted RBP18.17■□□□□ 0.5
EXT1-201ENST00000378204 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
EXT1-201ENST00000378204 NEFHP12036 1026 aa18.16■□□□□ 0.5
EXT1-201ENST00000378204 TRIM29Q14134 588 aa18.16■□□□□ 0.5
EXT1-201ENST00000378204 AMOTL1Q8IY63 956 aa18.16■□□□□ 0.5
EXT1-201ENST00000378204 CCAR2Q8N163 923 aaKnown RBP18.16■□□□□ 0.5
EXT1-201ENST00000378204 EVA1CP58658 441 aa18.15■□□□□ 0.5
EXT1-201ENST00000378204 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
EXT1-201ENST00000378204 IPO7O95373 1038 aaKnown RBP18.14■□□□□ 0.5
EXT1-201ENST00000378204 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.5
EXT1-201ENST00000378204 HOOK1Q9UJC3 728 aaKnown RBP18.14■□□□□ 0.49
EXT1-201ENST00000378204 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
EXT1-201ENST00000378204 NOL10Q9BSC4 688 aaKnown RBP18.14■□□□□ 0.49
EXT1-201ENST00000378204 ANKRD20A12PQ8NF67 263 aa18.14■□□□□ 0.49
EXT1-201ENST00000378204 RNF20Q5VTR2 975 aa18.13■□□□□ 0.49
EXT1-201ENST00000378204 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
EXT1-201ENST00000378204 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
EXT1-201ENST00000378204 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
EXT1-201ENST00000378204 ARGLU1Q9NWB6 273 aaPredicted RBP18.12■□□□□ 0.49
EXT1-201ENST00000378204 APAF1O14727 1248 aa18.12■□□□□ 0.49
EXT1-201ENST00000378204 TRDNQ13061 729 aa18.11■□□□□ 0.49
EXT1-201ENST00000378204 CPLX1O14810 134 aa18.11■□□□□ 0.49
EXT1-201ENST00000378204 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
EXT1-201ENST00000378204 API5Q9BZZ5 524 aaKnown RBP18.11■□□□□ 0.49
EXT1-201ENST00000378204 TCEAL9Q9UHQ7 104 aa18.11■□□□□ 0.49
EXT1-201ENST00000378204 CCDC47Q96A33 483 aaKnown RBP18.11■□□□□ 0.49
EXT1-201ENST00000378204 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
EXT1-201ENST00000378204 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
EXT1-201ENST00000378204 DZIP1LQ8IYY4 767 aaKnown RBP18.1■□□□□ 0.49
EXT1-201ENST00000378204 ACBD3Q9H3P7 528 aa18.1■□□□□ 0.49
EXT1-201ENST00000378204 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
EXT1-201ENST00000378204 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
EXT1-201ENST00000378204 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
EXT1-201ENST00000378204 DEF6Q9H4E7 631 aa18.09■□□□□ 0.49
EXT1-201ENST00000378204 H0YHG0 523 aa18.08■□□□□ 0.49
EXT1-201ENST00000378204 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.49
EXT1-201ENST00000378204 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.48
EXT1-201ENST00000378204 USP8P40818 1118 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 RIPK4P57078 832 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 VPS37DQ86XT2 251 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 CHMP5Q9NZZ3 219 aa18.07■□□□□ 0.48
EXT1-201ENST00000378204 PCMTD1Q96MG8 357 aaPredicted RBP18.06■□□□□ 0.48
EXT1-201ENST00000378204 G3BP1Q13283 466 aaKnown RBP eCLIP18.06■□□□□ 0.48
EXT1-201ENST00000378204 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
EXT1-201ENST00000378204 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
EXT1-201ENST00000378204 NUCB2P80303 420 aa18.05■□□□□ 0.48
EXT1-201ENST00000378204 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
EXT1-201ENST00000378204 RUNDC1Q96C34 613 aa18.05■□□□□ 0.48
EXT1-201ENST00000378204 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
EXT1-201ENST00000378204 AAMPQ13685 434 aa18.04■□□□□ 0.48
EXT1-201ENST00000378204 ERICH2A1L162 156 aa18.03■□□□□ 0.48
EXT1-201ENST00000378204 HSP90AB4PQ58FF6 505 aa18.03■□□□□ 0.48
EXT1-201ENST00000378204 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
EXT1-201ENST00000378204 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
EXT1-201ENST00000378204 PSME1Q06323 249 aa18.03■□□□□ 0.48
EXT1-201ENST00000378204 HSP90B2PQ58FF3 399 aa18.03■□□□□ 0.48
EXT1-201ENST00000378204 SMC3Q9UQE7 1217 aa18.02■□□□□ 0.48
EXT1-201ENST00000378204 ERC2O15083 957 aa18.02■□□□□ 0.48
EXT1-201ENST00000378204 SASS6Q6UVJ0 657 aa18.02■□□□□ 0.48
EXT1-201ENST00000378204 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.47
EXT1-201ENST00000378204 SMARCA4P51532 1647 aa18.02■□□□□ 0.47
EXT1-201ENST00000378204 HSP90AB3PQ58FF7 597 aa18.01■□□□□ 0.47
EXT1-201ENST00000378204 AK7Q96M32 723 aa18.01■□□□□ 0.47
EXT1-201ENST00000378204 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
EXT1-201ENST00000378204 CUX1P39880 1505 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms