RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 PPLO60437 1756 aa29.77■■■□□ 2.36
RNF38-205ENST00000377877 CARD11Q9BXL7 1154 aa29.77■■■□□ 2.36
RNF38-205ENST00000377877 RIMS1Q86UR5 1692 aaKnown RBP29.75■■■□□ 2.35
RNF38-205ENST00000377877 MYOM2P54296 1465 aa29.75■■■□□ 2.35
RNF38-205ENST00000377877 ROCK2O75116 1388 aaKnown RBP29.75■■■□□ 2.35
RNF38-205ENST00000377877 NEXMIFQ5QGS0 1516 aa29.73■■■□□ 2.35
RNF38-205ENST00000377877 A2ML1A8K2U0 1454 aa29.72■■■□□ 2.35
RNF38-205ENST00000377877 NRXN1Q9ULB1 1477 aa29.7■■■□□ 2.35
RNF38-205ENST00000377877 CFAP70Q5T0N1 1121 aa29.7■■■□□ 2.35
RNF38-205ENST00000377877 VGFO15240 615 aaPredicted RBP29.68■■■□□ 2.34
RNF38-205ENST00000377877 GPRASP1Q5JY77 1395 aa29.68■■■□□ 2.34
RNF38-205ENST00000377877 USP47Q96K76 1375 aa29.68■■■□□ 2.34
RNF38-205ENST00000377877 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
RNF38-205ENST00000377877 PIK3C2GO75747 1445 aa29.63■■■□□ 2.33
RNF38-205ENST00000377877 NLRP1Q9C000 1473 aa29.62■■■□□ 2.33
RNF38-205ENST00000377877 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
RNF38-205ENST00000377877 DIEXFQ68CQ4 756 aaKnown RBP29.62■■■□□ 2.33
RNF38-205ENST00000377877 C14orf93Q9H972 538 aaKnown RBP29.61■■■□□ 2.33
RNF38-205ENST00000377877 C11orf95C9JLR9 678 aaPredicted RBP29.61■■■□□ 2.33
RNF38-205ENST00000377877 UBR1Q8IWV7 1749 aa29.6■■■□□ 2.33
RNF38-205ENST00000377877 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
RNF38-205ENST00000377877 KIAA1210Q9ULL0 1709 aa29.59■■■□□ 2.33
RNF38-205ENST00000377877 ST20-MTHFSA0A0A6YYL1 179 aa29.59■■■□□ 2.33
RNF38-205ENST00000377877 LAMC1P11047 1609 aa29.57■■■□□ 2.32
RNF38-205ENST00000377877 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
RNF38-205ENST00000377877 KDM5AP29375 1690 aaKnown RBP29.55■■■□□ 2.32
RNF38-205ENST00000377877 TMEM132EQ6IEE7 984 aa29.54■■■□□ 2.32
RNF38-205ENST00000377877 PTPRMP28827 1452 aa29.53■■■□□ 2.32
RNF38-205ENST00000377877 TMEM2Q9UHN6 1383 aa29.53■■■□□ 2.32
RNF38-205ENST00000377877 WASHC2AQ641Q2 1341 aa29.51■■■□□ 2.32
RNF38-205ENST00000377877 MYO3AQ8NEV4 1616 aa29.51■■■□□ 2.31
RNF38-205ENST00000377877 DDX10Q13206 875 aaKnown RBP29.5■■■□□ 2.31
RNF38-205ENST00000377877 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.5■■■□□ 2.31
RNF38-205ENST00000377877 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
RNF38-205ENST00000377877 LTKP29376 864 aa29.48■■■□□ 2.31
RNF38-205ENST00000377877 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
RNF38-205ENST00000377877 IQGAP1P46940 1657 aa29.47■■■□□ 2.31
RNF38-205ENST00000377877 ADGRB1O14514 1584 aa29.46■■■□□ 2.31
RNF38-205ENST00000377877 HDGFP51858 240 aaKnown RBP29.46■■■□□ 2.31
RNF38-205ENST00000377877 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
RNF38-205ENST00000377877 SETBP1Q9Y6X0 1596 aa29.46■■■□□ 2.31
RNF38-205ENST00000377877 KDM4FA0A1W2PPD8 638 aa29.44■■■□□ 2.3
RNF38-205ENST00000377877 TESK2Q96S53 571 aa29.44■■■□□ 2.3
RNF38-205ENST00000377877 TXNDC2Q86VQ3 553 aa29.43■■■□□ 2.3
RNF38-205ENST00000377877 CCDC7Q96M83 1385 aa29.43■■■□□ 2.3
RNF38-205ENST00000377877 CEP170BQ9Y4F5 1589 aaPredicted RBP29.43■■■□□ 2.3
RNF38-205ENST00000377877 KIF7Q2M1P5 1343 aa29.43■■■□□ 2.3
RNF38-205ENST00000377877 ALKQ9UM73 1620 aa29.42■■■□□ 2.3
RNF38-205ENST00000377877 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
RNF38-205ENST00000377877 ARHGAP23Q9P227 1491 aa29.4■■■□□ 2.3
RNF38-205ENST00000377877 ASXL1Q8IXJ9 1541 aa29.39■■■□□ 2.3
RNF38-205ENST00000377877 SLIT1O75093 1534 aa29.39■■■□□ 2.3
RNF38-205ENST00000377877 EID1Q9Y6B2 187 aa29.37■■■□□ 2.29
RNF38-205ENST00000377877 NRXN3Q9Y4C0 1643 aa29.37■■■□□ 2.29
RNF38-205ENST00000377877 CENPBP07199 599 aaPredicted RBP29.36■■■□□ 2.29
RNF38-205ENST00000377877 BCANQ96GW7 911 aa29.36■■■□□ 2.29
RNF38-205ENST00000377877 STK26Q9P289 416 aa29.36■■■□□ 2.29
RNF38-205ENST00000377877 POLR3GLQ9BT43 218 aa29.34■■■□□ 2.29
RNF38-205ENST00000377877 POLR1AO95602 1720 aaPredicted RBP29.34■■■□□ 2.29
RNF38-205ENST00000377877 ZNF142P52746 1687 aaPredicted RBP29.33■■■□□ 2.29
RNF38-205ENST00000377877 SETD1AO15047 1707 aaKnown RBP29.32■■■□□ 2.28
RNF38-205ENST00000377877 EIF3AQ14152 1382 aaKnown RBP29.32■■■□□ 2.28
RNF38-205ENST00000377877 PLEKHG1Q9ULL1 1385 aa29.31■■■□□ 2.28
RNF38-205ENST00000377877 DISP3Q9P2K9 1392 aa29.31■■■□□ 2.28
RNF38-205ENST00000377877 METP08581 1390 aa29.3■■■□□ 2.28
RNF38-205ENST00000377877 YTHDC2Q9H6S0 1430 aaKnown RBP29.29■■■□□ 2.28
RNF38-205ENST00000377877 ADAMTS13Q76LX8 1427 aa29.29■■■□□ 2.28
RNF38-205ENST00000377877 SLC26A8Q96RN1 970 aa29.28■■■□□ 2.28
RNF38-205ENST00000377877 CENPJQ9HC77 1338 aaPredicted RBP29.27■■■□□ 2.28
RNF38-205ENST00000377877 MIER1Q8N108 512 aa29.27■■■□□ 2.28
RNF38-205ENST00000377877 TMF1P82094 1093 aa29.26■■■□□ 2.28
RNF38-205ENST00000377877 PELP1Q8IZL8 1130 aaKnown RBP29.25■■■□□ 2.27
RNF38-205ENST00000377877 ANKLE2Q86XL3 938 aa29.24■■■□□ 2.27
RNF38-205ENST00000377877 ARHGEF28Q8N1W1 1705 aaKnown RBP29.24■■■□□ 2.27
RNF38-205ENST00000377877 MED14O60244 1454 aa29.22■■■□□ 2.27
RNF38-205ENST00000377877 LRPPRCP42704 1394 aaKnown RBP29.21■■■□□ 2.27
RNF38-205ENST00000377877 SAFB2Q14151 953 aaKnown RBP eCLIP29.21■■■□□ 2.27
RNF38-205ENST00000377877 PRAM1Q96QH2 718 aa29.19■■■□□ 2.26
RNF38-205ENST00000377877 TBX22Q9Y458 520 aa29.18■■■□□ 2.26
RNF38-205ENST00000377877 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
RNF38-205ENST00000377877 QRICH2Q9H0J4 1663 aa29.17■■■□□ 2.26
RNF38-205ENST00000377877 WAPLQ7Z5K2 1190 aa29.17■■■□□ 2.26
RNF38-205ENST00000377877 SBNO2Q9Y2G9 1366 aa29.16■■■□□ 2.26
RNF38-205ENST00000377877 POGKQ9P215 609 aa29.15■■■□□ 2.26
RNF38-205ENST00000377877 NCKAP5LQ9HCH0 1330 aa29.13■■■□□ 2.25
RNF38-205ENST00000377877 PTPRUQ92729 1446 aa29.12■■■□□ 2.25
RNF38-205ENST00000377877 PLEKHH1Q9ULM0 1364 aa29.12■■■□□ 2.25
RNF38-205ENST00000377877 SLC24A1O60721 1099 aa29.12■■■□□ 2.25
RNF38-205ENST00000377877 DLC1Q96QB1 1528 aa29.1■■■□□ 2.25
RNF38-205ENST00000377877 CDCA8Q53HL2 280 aa29.1■■■□□ 2.25
RNF38-205ENST00000377877 MINK1Q8N4C8 1332 aaPredicted RBP29.09■■■□□ 2.25
RNF38-205ENST00000377877 HSPA2P54652 639 aa29.09■■■□□ 2.25
RNF38-205ENST00000377877 AMOTL2Q9Y2J4 779 aa29.08■■■□□ 2.25
RNF38-205ENST00000377877 TECPR2O15040 1411 aa29.07■■■□□ 2.24
RNF38-205ENST00000377877 SIRT1Q96EB6 747 aa29.06■■■□□ 2.24
RNF38-205ENST00000377877 ROBO2Q9HCK4 1378 aa29.05■■■□□ 2.24
RNF38-205ENST00000377877 DIP2AQ14689 1571 aa29.04■■■□□ 2.24
RNF38-205ENST00000377877 KNDC1Q76NI1 1749 aa29.04■■■□□ 2.24
RNF38-205ENST00000377877 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
RNF38-205ENST00000377877 NPHP4O75161 1426 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms