RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 TESK2Q96S53 571 aa20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 NUP155O75694 1391 aa20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
CSNK1A1-202ENST00000377843 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
CSNK1A1-202ENST00000377843 GRPEL1Q9HAV7 217 aa20.02■□□□□ 0.8
CSNK1A1-202ENST00000377843 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.79
CSNK1A1-202ENST00000377843 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
CSNK1A1-202ENST00000377843 GPATCH8Q9UKJ3 1502 aaKnown RBP20.01■□□□□ 0.79
CSNK1A1-202ENST00000377843 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
CSNK1A1-202ENST00000377843 OSCARQ8IYS5 282 aa20■□□□□ 0.79
CSNK1A1-202ENST00000377843 PLEKHG5O94827 1062 aa20■□□□□ 0.79
CSNK1A1-202ENST00000377843 PPP2R1AP30153 589 aa20■□□□□ 0.79
CSNK1A1-202ENST00000377843 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
CSNK1A1-202ENST00000377843 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
CSNK1A1-202ENST00000377843 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
CSNK1A1-202ENST00000377843 PODXL2Q9NZ53 605 aa19.99■□□□□ 0.79
CSNK1A1-202ENST00000377843 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
CSNK1A1-202ENST00000377843 ADGBQ8N7X0 1667 aa19.99■□□□□ 0.79
CSNK1A1-202ENST00000377843 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
CSNK1A1-202ENST00000377843 CLUAP1Q96AJ1 413 aa19.98■□□□□ 0.79
CSNK1A1-202ENST00000377843 KDM5DQ9BY66 1539 aa19.98■□□□□ 0.79
CSNK1A1-202ENST00000377843 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
CSNK1A1-202ENST00000377843 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.792e-10■■■■■ 36.2
CSNK1A1-202ENST00000377843 TRPM1Q7Z4N2 1603 aa19.97■□□□□ 0.79
CSNK1A1-202ENST00000377843 NKTRP30414 1462 aaKnown RBP19.97■□□□□ 0.79
CSNK1A1-202ENST00000377843 ANKRD30AQ9BXX3 1397 aa19.96■□□□□ 0.79
CSNK1A1-202ENST00000377843 GAS2L3Q86XJ1 694 aa19.96■□□□□ 0.79
CSNK1A1-202ENST00000377843 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
CSNK1A1-202ENST00000377843 TPM2P07951 284 aa19.94■□□□□ 0.78
CSNK1A1-202ENST00000377843 CHMP5Q9NZZ3 219 aa19.94■□□□□ 0.78
CSNK1A1-202ENST00000377843 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
CSNK1A1-202ENST00000377843 CGNL1Q0VF96 1302 aa19.94■□□□□ 0.78
CSNK1A1-202ENST00000377843 UPF2Q9HAU5 1272 aaKnown RBP19.94■□□□□ 0.78
CSNK1A1-202ENST00000377843 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
CSNK1A1-202ENST00000377843 MAGI2Q86UL8 1455 aa19.93■□□□□ 0.78
CSNK1A1-202ENST00000377843 APAF1O14727 1248 aa19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 PRDM4Q9UKN5 801 aa19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 GPRASP1Q5JY77 1395 aa19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 RGL3Q3MIN7 710 aa19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 ZNF692Q9BU19 519 aaPredicted RBP19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 RTEL1-TNFRSF6BF6WH68 1400 aa19.92■□□□□ 0.78
CSNK1A1-202ENST00000377843 PDE3AQ14432 1141 aa19.91■□□□□ 0.78
CSNK1A1-202ENST00000377843 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
CSNK1A1-202ENST00000377843 KIAA1211Q6ZU35 1233 aa19.9■□□□□ 0.78
CSNK1A1-202ENST00000377843 PDZRN3Q9UPQ7 1066 aa19.9■□□□□ 0.78
CSNK1A1-202ENST00000377843 ABCC2Q92887 1545 aa19.9■□□□□ 0.78
CSNK1A1-202ENST00000377843 ABCC10Q5T3U5 1492 aa19.9■□□□□ 0.78
CSNK1A1-202ENST00000377843 CROCC2H7BZ55 1655 aa19.9■□□□□ 0.78
CSNK1A1-202ENST00000377843 TRIM44Q96DX7 344 aaPredicted RBP19.89■□□□□ 0.77
CSNK1A1-202ENST00000377843 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
CSNK1A1-202ENST00000377843 TNNQ9UQP3 1299 aa19.89■□□□□ 0.77
CSNK1A1-202ENST00000377843 CALD1Q05682 793 aaKnown RBP19.88■□□□□ 0.77
CSNK1A1-202ENST00000377843 PRDM15P57071 1507 aaPredicted RBP19.87■□□□□ 0.77
CSNK1A1-202ENST00000377843 TMF1P82094 1093 aa19.87■□□□□ 0.77
CSNK1A1-202ENST00000377843 E9PSI1 815 aa19.86■□□□□ 0.77
CSNK1A1-202ENST00000377843 RIPK4P57078 832 aa19.86■□□□□ 0.77
CSNK1A1-202ENST00000377843 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
CSNK1A1-202ENST00000377843 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
CSNK1A1-202ENST00000377843 RBM10P98175 930 aaKnown RBP19.85■□□□□ 0.77
CSNK1A1-202ENST00000377843 RLBP1P12271 317 aa19.85■□□□□ 0.77
CSNK1A1-202ENST00000377843 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
CSNK1A1-202ENST00000377843 C22orf23Q9BZE7 217 aa19.84■□□□□ 0.77
CSNK1A1-202ENST00000377843 ISY1Q9ULR0 285 aaKnown RBP19.84■□□□□ 0.77
CSNK1A1-202ENST00000377843 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
CSNK1A1-202ENST00000377843 CDC42BPAQ5VT25 1732 aa19.84■□□□□ 0.77
CSNK1A1-202ENST00000377843 A2MP01023 1474 aa19.83■□□□□ 0.77
CSNK1A1-202ENST00000377843 ADCY10Q96PN6 1610 aa19.83■□□□□ 0.77
CSNK1A1-202ENST00000377843 DDIT3P35638 169 aa19.83■□□□□ 0.77
CSNK1A1-202ENST00000377843 MFAP1P55081 439 aaKnown RBP19.83■□□□□ 0.77
CSNK1A1-202ENST00000377843 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
CSNK1A1-202ENST00000377843 ZMYM3Q14202 1370 aa19.81■□□□□ 0.76
CSNK1A1-202ENST00000377843 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
CSNK1A1-202ENST00000377843 C9orf84Q5VXU9 1444 aa19.81■□□□□ 0.76
CSNK1A1-202ENST00000377843 TNPO1Q92973 898 aaKnown RBP19.8■□□□□ 0.76
CSNK1A1-202ENST00000377843 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
CSNK1A1-202ENST00000377843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.764e-8■■□□□ 12.1
CSNK1A1-202ENST00000377843 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
CSNK1A1-202ENST00000377843 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
CSNK1A1-202ENST00000377843 CCDC144AA2RUR9 1427 aa19.79■□□□□ 0.76
CSNK1A1-202ENST00000377843 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
CSNK1A1-202ENST00000377843 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
CSNK1A1-202ENST00000377843 OFD1O75665 1012 aa19.78■□□□□ 0.76
CSNK1A1-202ENST00000377843 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
CSNK1A1-202ENST00000377843 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
CSNK1A1-202ENST00000377843 LAMC1P11047 1609 aa19.77■□□□□ 0.76
CSNK1A1-202ENST00000377843 PLA2R1Q13018 1463 aa19.77■□□□□ 0.76
CSNK1A1-202ENST00000377843 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
CSNK1A1-202ENST00000377843 PPP1R9BQ96SB3 815 aa19.76■□□□□ 0.75
CSNK1A1-202ENST00000377843 ZSCAN30Q86W11 494 aa19.75■□□□□ 0.75
CSNK1A1-202ENST00000377843 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
CSNK1A1-202ENST00000377843 RARSP54136 660 aaKnown RBP19.75■□□□□ 0.75
CSNK1A1-202ENST00000377843 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
CSNK1A1-202ENST00000377843 BCL2L13Q9BXK5 485 aa19.75■□□□□ 0.75
CSNK1A1-202ENST00000377843 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
CSNK1A1-202ENST00000377843 WWC1Q8IX03 1113 aa19.74■□□□□ 0.75
CSNK1A1-202ENST00000377843 FAM13BQ9NYF5 915 aa19.74■□□□□ 0.75
CSNK1A1-202ENST00000377843 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
CSNK1A1-202ENST00000377843 CCDC173Q0VFZ6 552 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms