RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
CUBN-201ENST00000377823 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
CUBN-201ENST00000377823 TMEM134Q9H6X4 195 aa8.2□□□□□ -1.1
CUBN-201ENST00000377823 RABGEF1Q9UJ41 708 aa8.2□□□□□ -1.1
CUBN-201ENST00000377823 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
CUBN-201ENST00000377823 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
CUBN-201ENST00000377823 PCMTD1Q96MG8 357 aaPredicted RBP8.18□□□□□ -1.1
CUBN-201ENST00000377823 HS3ST6Q96QI5 342 aa8.18□□□□□ -1.1
CUBN-201ENST00000377823 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
CUBN-201ENST00000377823 SEPT9Q9UHD8 586 aaPredicted RBP8.17□□□□□ -1.1
CUBN-201ENST00000377823 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
CUBN-201ENST00000377823 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
CUBN-201ENST00000377823 CD46P15529 392 aa8.16□□□□□ -1.1
CUBN-201ENST00000377823 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
CUBN-201ENST00000377823 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
CUBN-201ENST00000377823 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
CUBN-201ENST00000377823 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
CUBN-201ENST00000377823 DIXDC1Q155Q3 683 aa8.14□□□□□ -1.11
CUBN-201ENST00000377823 MYSM1Q5VVJ2 828 aa8.14□□□□□ -1.11
CUBN-201ENST00000377823 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
CUBN-201ENST00000377823 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
CUBN-201ENST00000377823 FAM98CQ17RN3 349 aaKnown RBP8.13□□□□□ -1.11
CUBN-201ENST00000377823 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
CUBN-201ENST00000377823 RDH13Q8NBN7 331 aa8.13□□□□□ -1.11
CUBN-201ENST00000377823 TK2O00142 265 aa8.12□□□□□ -1.11
CUBN-201ENST00000377823 NUTM1Q86Y26 1132 aa8.12□□□□□ -1.11
CUBN-201ENST00000377823 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
CUBN-201ENST00000377823 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
CUBN-201ENST00000377823 RSPH4AQ5TD94 716 aa8.11□□□□□ -1.11
CUBN-201ENST00000377823 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
CUBN-201ENST00000377823 PROCA1Q8NCQ7 364 aaPredicted RBP8.11□□□□□ -1.11
CUBN-201ENST00000377823 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
CUBN-201ENST00000377823 SLC4A3P48751 1232 aa8.1□□□□□ -1.11
CUBN-201ENST00000377823 CLK2P49760 499 aaKnown RBP8.1□□□□□ -1.11
CUBN-201ENST00000377823 LSM11P83369 360 aaKnown RBP eCLIP8.1□□□□□ -1.11
CUBN-201ENST00000377823 SLC10A3P09131 477 aa8.08□□□□□ -1.12
CUBN-201ENST00000377823 ADGRD1Q6QNK2 874 aa8.08□□□□□ -1.12
CUBN-201ENST00000377823 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
CUBN-201ENST00000377823 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
CUBN-201ENST00000377823 MRPL50Q8N5N7 158 aaKnown RBP8.08□□□□□ -1.12
CUBN-201ENST00000377823 LIMD1Q9UGP4 676 aa8.08□□□□□ -1.12
CUBN-201ENST00000377823 KDM4AO75164 1064 aa8.07□□□□□ -1.12
CUBN-201ENST00000377823 GCGRP47871 477 aa8.07□□□□□ -1.12
CUBN-201ENST00000377823 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
CUBN-201ENST00000377823 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
CUBN-201ENST00000377823 ZFRQ96KR1 1074 aaKnown RBP8.07□□□□□ -1.12
CUBN-201ENST00000377823 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
CUBN-201ENST00000377823 MOXD2PA6NHM9 499 aa8.06□□□□□ -1.12
CUBN-201ENST00000377823 SPTLC1O15269 473 aa8.06□□□□□ -1.12
CUBN-201ENST00000377823 RNF40O75150 1001 aa8.06□□□□□ -1.12
CUBN-201ENST00000377823 RSBN1LQ6PCB5 846 aaPredicted RBP8.06□□□□□ -1.12
CUBN-201ENST00000377823 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
CUBN-201ENST00000377823 NDUFV2P19404 249 aa8.05□□□□□ -1.12
CUBN-201ENST00000377823 USP46P62068 366 aa8.05□□□□□ -1.12
CUBN-201ENST00000377823 FLIIQ13045 1269 aa8.05□□□□□ -1.12
CUBN-201ENST00000377823 HRO43593 1189 aa8.04□□□□□ -1.12
CUBN-201ENST00000377823 STAC3Q96MF2 364 aa8.04□□□□□ -1.12
CUBN-201ENST00000377823 GJA5P36382 358 aa8.03□□□□□ -1.12
CUBN-201ENST00000377823 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CUBN-201ENST00000377823 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
CUBN-201ENST00000377823 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
CUBN-201ENST00000377823 GOLGA8CPA6NN73 597 aa8.02□□□□□ -1.13
CUBN-201ENST00000377823 HOXA2O43364 376 aa8.02□□□□□ -1.13
CUBN-201ENST00000377823 CFHP08603 1231 aa8.02□□□□□ -1.13
CUBN-201ENST00000377823 RFC5P40937 340 aa8.01□□□□□ -1.13
CUBN-201ENST00000377823 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
CUBN-201ENST00000377823 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
CUBN-201ENST00000377823 PCDHB15Q9Y5E8 787 aa8.01□□□□□ -1.13
CUBN-201ENST00000377823 FDX1P10109 184 aa8□□□□□ -1.13
CUBN-201ENST00000377823 FBXO31Q5XUX0 539 aaPredicted RBP8□□□□□ -1.13
CUBN-201ENST00000377823 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
CUBN-201ENST00000377823 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
CUBN-201ENST00000377823 LILRB3O75022 631 aa7.99□□□□□ -1.13
CUBN-201ENST00000377823 FUT2Q10981 343 aa7.99□□□□□ -1.13
CUBN-201ENST00000377823 QPCTQ16769 361 aa7.99□□□□□ -1.13
CUBN-201ENST00000377823 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
CUBN-201ENST00000377823 NECTIN2Q92692 538 aa7.99□□□□□ -1.13
CUBN-201ENST00000377823 NUTM2BA6NNL0 878 aaPredicted RBP7.98□□□□□ -1.13
CUBN-201ENST00000377823 NUTM2EB1AL46 878 aaPredicted RBP7.98□□□□□ -1.13
CUBN-201ENST00000377823 GUCA2AQ02747 115 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 MCM6Q14566 821 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 NUTM2DQ5VT03 806 aaPredicted RBP7.98□□□□□ -1.13
CUBN-201ENST00000377823 PRPF38BQ5VTL8 546 aaKnown RBP7.98□□□□□ -1.13
CUBN-201ENST00000377823 NUTM2AQ8IVF1 878 aaPredicted RBP7.98□□□□□ -1.13
CUBN-201ENST00000377823 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 HLA-CQ95604 372 aa7.98□□□□□ -1.13
CUBN-201ENST00000377823 BANK1Q8NDB2 785 aa7.97□□□□□ -1.13
CUBN-201ENST00000377823 ZBTB3Q9H5J0 574 aa7.97□□□□□ -1.13
CUBN-201ENST00000377823 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
CUBN-201ENST00000377823 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
CUBN-201ENST00000377823 SUPT5HO00267 1087 aaKnown RBP7.96□□□□□ -1.14
CUBN-201ENST00000377823 HRCP23327 699 aa7.96□□□□□ -1.14
CUBN-201ENST00000377823 ATP6V1AP38606 617 aa7.96□□□□□ -1.14
CUBN-201ENST00000377823 RTL5Q5HYW3 569 aaPredicted RBP7.96□□□□□ -1.14
CUBN-201ENST00000377823 WNT2BQ93097 391 aa7.96□□□□□ -1.14
CUBN-201ENST00000377823 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.14
CUBN-201ENST00000377823 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
CUBN-201ENST00000377823 BCAMP50895 628 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms