RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
CEACAM1-205ENST00000377806 ZMYM4Q5VZL5 1548 aa16.95■□□□□ 0.3
CEACAM1-205ENST00000377806 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
CEACAM1-205ENST00000377806 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
CEACAM1-205ENST00000377806 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
CEACAM1-205ENST00000377806 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
CEACAM1-205ENST00000377806 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
CEACAM1-205ENST00000377806 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
CEACAM1-205ENST00000377806 ARHGEF40Q8TER5 1519 aa16.94■□□□□ 0.3
CEACAM1-205ENST00000377806 BRD2P25440 801 aaKnown RBP16.93■□□□□ 0.3
CEACAM1-205ENST00000377806 TSHZ2Q9NRE2 1034 aa16.93■□□□□ 0.3
CEACAM1-205ENST00000377806 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
CEACAM1-205ENST00000377806 STAC3Q96MF2 364 aa16.89■□□□□ 0.3
CEACAM1-205ENST00000377806 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
CEACAM1-205ENST00000377806 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
CEACAM1-205ENST00000377806 ABCC3O15438 1527 aa16.87■□□□□ 0.29
CEACAM1-205ENST00000377806 TESK2Q96S53 571 aa16.87■□□□□ 0.29
CEACAM1-205ENST00000377806 NPATQ14207 1427 aa16.86■□□□□ 0.29
CEACAM1-205ENST00000377806 AAMPQ13685 434 aa16.86■□□□□ 0.29
CEACAM1-205ENST00000377806 MYOM2P54296 1465 aa16.86■□□□□ 0.29
CEACAM1-205ENST00000377806 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
CEACAM1-205ENST00000377806 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
CEACAM1-205ENST00000377806 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
CEACAM1-205ENST00000377806 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
CEACAM1-205ENST00000377806 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
CEACAM1-205ENST00000377806 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
CEACAM1-205ENST00000377806 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
CEACAM1-205ENST00000377806 KIF1BO60333 1816 aa16.82■□□□□ 0.28
CEACAM1-205ENST00000377806 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
CEACAM1-205ENST00000377806 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
CEACAM1-205ENST00000377806 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
CEACAM1-205ENST00000377806 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
CEACAM1-205ENST00000377806 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
CEACAM1-205ENST00000377806 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
CEACAM1-205ENST00000377806 NOS1P29475 1434 aa16.8■□□□□ 0.28
CEACAM1-205ENST00000377806 GGT6Q6P531 493 aa16.79■□□□□ 0.28
CEACAM1-205ENST00000377806 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
CEACAM1-205ENST00000377806 ARHGAP31Q2M1Z3 1444 aa16.78■□□□□ 0.28
CEACAM1-205ENST00000377806 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
CEACAM1-205ENST00000377806 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
CEACAM1-205ENST00000377806 PIK3C2BO00750 1634 aa16.77■□□□□ 0.27
CEACAM1-205ENST00000377806 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.27
CEACAM1-205ENST00000377806 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 WASHC2CQ9Y4E1 1318 aa16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 SYNMO15061 1565 aa16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 MLECQ14165 292 aa16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
CEACAM1-205ENST00000377806 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
CEACAM1-205ENST00000377806 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
CEACAM1-205ENST00000377806 PER1O15534 1290 aaPredicted RBP16.74■□□□□ 0.27
CEACAM1-205ENST00000377806 TMF1P82094 1093 aa16.74■□□□□ 0.27
CEACAM1-205ENST00000377806 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
CEACAM1-205ENST00000377806 PPLO60437 1756 aa16.73■□□□□ 0.27
CEACAM1-205ENST00000377806 RIMS1Q86UR5 1692 aaKnown RBP16.71■□□□□ 0.27
CEACAM1-205ENST00000377806 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.27
CEACAM1-205ENST00000377806 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
CEACAM1-205ENST00000377806 FER1L4A9Z1Z3 1794 aa16.71■□□□□ 0.27
CEACAM1-205ENST00000377806 SETBP1Q9Y6X0 1596 aa16.71■□□□□ 0.26
CEACAM1-205ENST00000377806 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.26
CEACAM1-205ENST00000377806 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
CEACAM1-205ENST00000377806 RALBP1Q15311 655 aa16.7■□□□□ 0.26
CEACAM1-205ENST00000377806 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
CEACAM1-205ENST00000377806 AGLP35573 1532 aa16.7■□□□□ 0.26
CEACAM1-205ENST00000377806 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
CEACAM1-205ENST00000377806 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
CEACAM1-205ENST00000377806 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
CEACAM1-205ENST00000377806 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
CEACAM1-205ENST00000377806 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
CEACAM1-205ENST00000377806 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
CEACAM1-205ENST00000377806 ZMYND15Q9H091 742 aa16.67■□□□□ 0.26
CEACAM1-205ENST00000377806 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
CEACAM1-205ENST00000377806 ADGRB1O14514 1584 aa16.67■□□□□ 0.26
CEACAM1-205ENST00000377806 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
CEACAM1-205ENST00000377806 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
CEACAM1-205ENST00000377806 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
CEACAM1-205ENST00000377806 CFAP65Q6ZU64 1925 aaKnown RBP16.66■□□□□ 0.26
CEACAM1-205ENST00000377806 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
CEACAM1-205ENST00000377806 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
CEACAM1-205ENST00000377806 PANK3Q9H999 370 aa16.65■□□□□ 0.26
CEACAM1-205ENST00000377806 MYOM1P52179 1685 aa16.65■□□□□ 0.26
CEACAM1-205ENST00000377806 LRPPRCP42704 1394 aaKnown RBP16.65■□□□□ 0.26
CEACAM1-205ENST00000377806 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
CEACAM1-205ENST00000377806 C14orf93Q9H972 538 aaKnown RBP16.64■□□□□ 0.25
CEACAM1-205ENST00000377806 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
CEACAM1-205ENST00000377806 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
CEACAM1-205ENST00000377806 RBM10P98175 930 aaKnown RBP16.63■□□□□ 0.25
CEACAM1-205ENST00000377806 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
CEACAM1-205ENST00000377806 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
CEACAM1-205ENST00000377806 PTPRMP28827 1452 aa16.62■□□□□ 0.25
CEACAM1-205ENST00000377806 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
CEACAM1-205ENST00000377806 BCANQ96GW7 911 aa16.61■□□□□ 0.25
CEACAM1-205ENST00000377806 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
CEACAM1-205ENST00000377806 ZFYVE9O95405 1425 aa16.61■□□□□ 0.25
CEACAM1-205ENST00000377806 IDI1Q13907 227 aa16.61■□□□□ 0.25
CEACAM1-205ENST00000377806 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
CEACAM1-205ENST00000377806 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
CEACAM1-205ENST00000377806 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
CEACAM1-205ENST00000377806 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
CEACAM1-205ENST00000377806 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms