RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 NLRP1Q9C000 1473 aa18.49■□□□□ 0.55
KRT40-201ENST00000377755 PPLO60437 1756 aa18.48■□□□□ 0.55
KRT40-201ENST00000377755 MYOM2P54296 1465 aa18.48■□□□□ 0.55
KRT40-201ENST00000377755 KDM4FA0A1W2PPD8 638 aa18.47■□□□□ 0.55
KRT40-201ENST00000377755 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.55
KRT40-201ENST00000377755 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.54
KRT40-201ENST00000377755 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
KRT40-201ENST00000377755 UBR1Q8IWV7 1749 aa18.45■□□□□ 0.54
KRT40-201ENST00000377755 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
KRT40-201ENST00000377755 NRXN1Q9ULB1 1477 aa18.44■□□□□ 0.54
KRT40-201ENST00000377755 MYO3AQ8NEV4 1616 aa18.44■□□□□ 0.54
KRT40-201ENST00000377755 RIMS2Q9UQ26 1411 aa18.43■□□□□ 0.54
KRT40-201ENST00000377755 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
KRT40-201ENST00000377755 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
KRT40-201ENST00000377755 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
KRT40-201ENST00000377755 CFAP70Q5T0N1 1121 aa18.42■□□□□ 0.54
KRT40-201ENST00000377755 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
KRT40-201ENST00000377755 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
KRT40-201ENST00000377755 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
KRT40-201ENST00000377755 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
KRT40-201ENST00000377755 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
KRT40-201ENST00000377755 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
KRT40-201ENST00000377755 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
KRT40-201ENST00000377755 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
KRT40-201ENST00000377755 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
KRT40-201ENST00000377755 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
KRT40-201ENST00000377755 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
KRT40-201ENST00000377755 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
KRT40-201ENST00000377755 C14orf93Q9H972 538 aaKnown RBP18.37■□□□□ 0.53
KRT40-201ENST00000377755 LTKP29376 864 aa18.36■□□□□ 0.53
KRT40-201ENST00000377755 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
KRT40-201ENST00000377755 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
KRT40-201ENST00000377755 USP47Q96K76 1375 aa18.35■□□□□ 0.53
KRT40-201ENST00000377755 SLIT1O75093 1534 aa18.34■□□□□ 0.53
KRT40-201ENST00000377755 ARHGAP23Q9P227 1491 aa18.34■□□□□ 0.53
KRT40-201ENST00000377755 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
KRT40-201ENST00000377755 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
KRT40-201ENST00000377755 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
KRT40-201ENST00000377755 LAMC1P11047 1609 aa18.31■□□□□ 0.52
KRT40-201ENST00000377755 EID1Q9Y6B2 187 aa18.31■□□□□ 0.52
KRT40-201ENST00000377755 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
KRT40-201ENST00000377755 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
KRT40-201ENST00000377755 ALKQ9UM73 1620 aa18.29■□□□□ 0.52
KRT40-201ENST00000377755 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
KRT40-201ENST00000377755 BCANQ96GW7 911 aa18.28■□□□□ 0.52
KRT40-201ENST00000377755 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
KRT40-201ENST00000377755 SCAF11Q99590 1463 aaKnown RBP18.27■□□□□ 0.52
KRT40-201ENST00000377755 PLEKHG1Q9ULL1 1385 aa18.27■□□□□ 0.52
KRT40-201ENST00000377755 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
KRT40-201ENST00000377755 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
KRT40-201ENST00000377755 C11orf95C9JLR9 678 aaPredicted RBP18.25■□□□□ 0.51
KRT40-201ENST00000377755 ANKLE2Q86XL3 938 aa18.25■□□□□ 0.51
KRT40-201ENST00000377755 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
KRT40-201ENST00000377755 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
KRT40-201ENST00000377755 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
KRT40-201ENST00000377755 METP08581 1390 aa18.22■□□□□ 0.51
KRT40-201ENST00000377755 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
KRT40-201ENST00000377755 STK26Q9P289 416 aa18.22■□□□□ 0.51
KRT40-201ENST00000377755 TESK2Q96S53 571 aa18.21■□□□□ 0.51
KRT40-201ENST00000377755 YTHDC2Q9H6S0 1430 aaKnown RBP18.2■□□□□ 0.5
KRT40-201ENST00000377755 MED14O60244 1454 aa18.2■□□□□ 0.5
KRT40-201ENST00000377755 HSPA2P54652 639 aa18.19■□□□□ 0.5
KRT40-201ENST00000377755 WASHC2AQ641Q2 1341 aa18.19■□□□□ 0.5
KRT40-201ENST00000377755 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
KRT40-201ENST00000377755 NCKAP5LQ9HCH0 1330 aa18.18■□□□□ 0.5
KRT40-201ENST00000377755 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
KRT40-201ENST00000377755 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
KRT40-201ENST00000377755 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
KRT40-201ENST00000377755 KIF7Q2M1P5 1343 aa18.16■□□□□ 0.5
KRT40-201ENST00000377755 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
KRT40-201ENST00000377755 ARHGEF28Q8N1W1 1705 aaKnown RBP18.15■□□□□ 0.5
KRT40-201ENST00000377755 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
KRT40-201ENST00000377755 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
KRT40-201ENST00000377755 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
KRT40-201ENST00000377755 DDX10Q13206 875 aaKnown RBP18.14■□□□□ 0.49
KRT40-201ENST00000377755 POLR1AO95602 1720 aaPredicted RBP18.13■□□□□ 0.49
KRT40-201ENST00000377755 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
KRT40-201ENST00000377755 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
KRT40-201ENST00000377755 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
KRT40-201ENST00000377755 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
KRT40-201ENST00000377755 PRAM1Q96QH2 718 aa18.12■□□□□ 0.49
KRT40-201ENST00000377755 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
KRT40-201ENST00000377755 TMF1P82094 1093 aa18.12■□□□□ 0.49
KRT40-201ENST00000377755 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
KRT40-201ENST00000377755 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
KRT40-201ENST00000377755 POGKQ9P215 609 aa18.1■□□□□ 0.49
KRT40-201ENST00000377755 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
KRT40-201ENST00000377755 DLC1Q96QB1 1528 aa18.1■□□□□ 0.49
KRT40-201ENST00000377755 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
KRT40-201ENST00000377755 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
KRT40-201ENST00000377755 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
KRT40-201ENST00000377755 TECPR2O15040 1411 aa18.09■□□□□ 0.49
KRT40-201ENST00000377755 ROBO2Q9HCK4 1378 aa18.07■□□□□ 0.48
KRT40-201ENST00000377755 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
KRT40-201ENST00000377755 KNDC1Q76NI1 1749 aa18.07■□□□□ 0.48
KRT40-201ENST00000377755 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
KRT40-201ENST00000377755 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
KRT40-201ENST00000377755 CPS1P31327 1500 aa18.05■□□□□ 0.48
KRT40-201ENST00000377755 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
KRT40-201ENST00000377755 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms