RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
UCHL3-201ENST00000377595 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
UCHL3-201ENST00000377595 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.28■■□□□ 1.32
UCHL3-201ENST00000377595 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
UCHL3-201ENST00000377595 FOXD1Q16676 465 aa23.27■■□□□ 1.32
UCHL3-201ENST00000377595 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
UCHL3-201ENST00000377595 TET3O43151 1660 aa23.26■■□□□ 1.31
UCHL3-201ENST00000377595 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
UCHL3-201ENST00000377595 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
UCHL3-201ENST00000377595 PLEKHG1Q9ULL1 1385 aa23.23■■□□□ 1.31
UCHL3-201ENST00000377595 ZFYVE9O95405 1425 aa23.22■■□□□ 1.31
UCHL3-201ENST00000377595 UNC13BO14795 1591 aa23.19■■□□□ 1.3
UCHL3-201ENST00000377595 MED1Q15648 1581 aaPredicted RBP23.19■■□□□ 1.3
UCHL3-201ENST00000377595 FAM135BQ49AJ0 1406 aa23.19■■□□□ 1.3
UCHL3-201ENST00000377595 SLAIN2Q9P270 581 aa23.17■■□□□ 1.3
UCHL3-201ENST00000377595 MSH6P52701 1360 aa23.16■■□□□ 1.3
UCHL3-201ENST00000377595 C14orf37Q86TY3 774 aa23.16■■□□□ 1.3
UCHL3-201ENST00000377595 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
UCHL3-201ENST00000377595 GCC2Q8IWJ2 1684 aa23.14■■□□□ 1.29
UCHL3-201ENST00000377595 ZNF326Q5BKZ1 582 aaKnown RBP23.14■■□□□ 1.29
UCHL3-201ENST00000377595 E9PCH4 1651 aa23.13■■□□□ 1.29
UCHL3-201ENST00000377595 NKTRP30414 1462 aaKnown RBP23.12■■□□□ 1.29
UCHL3-201ENST00000377595 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
UCHL3-201ENST00000377595 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
UCHL3-201ENST00000377595 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
UCHL3-201ENST00000377595 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
UCHL3-201ENST00000377595 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
UCHL3-201ENST00000377595 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
UCHL3-201ENST00000377595 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
UCHL3-201ENST00000377595 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
UCHL3-201ENST00000377595 MYO5BQ9ULV0 1848 aa23.06■■□□□ 1.28
UCHL3-201ENST00000377595 ATF3P18847 181 aa23.06■■□□□ 1.28
UCHL3-201ENST00000377595 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
UCHL3-201ENST00000377595 RGS17Q9UGC6 210 aaPredicted RBP23.05■■□□□ 1.28
UCHL3-201ENST00000377595 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
UCHL3-201ENST00000377595 NCOA3Q9Y6Q9 1424 aa23.04■■□□□ 1.28
UCHL3-201ENST00000377595 NAIPQ13075 1403 aa23.02■■□□□ 1.28
UCHL3-201ENST00000377595 CHD2O14647 1828 aaKnown RBP23■■□□□ 1.27
UCHL3-201ENST00000377595 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
UCHL3-201ENST00000377595 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
UCHL3-201ENST00000377595 PTPRUQ92729 1446 aa22.98■■□□□ 1.27
UCHL3-201ENST00000377595 TRPM2O94759 1503 aa22.95■■□□□ 1.26
UCHL3-201ENST00000377595 DIP2AQ14689 1571 aa22.95■■□□□ 1.26
UCHL3-201ENST00000377595 METP08581 1390 aa22.94■■□□□ 1.26
UCHL3-201ENST00000377595 JCADQ9P266 1359 aa22.94■■□□□ 1.26
UCHL3-201ENST00000377595 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
UCHL3-201ENST00000377595 POTEAQ6S8J7 498 aa22.93■■□□□ 1.26
UCHL3-201ENST00000377595 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
UCHL3-201ENST00000377595 BRINP3Q76B58 766 aa22.9■■□□□ 1.26
UCHL3-201ENST00000377595 SPHKAPQ2M3C7 1700 aa22.9■■□□□ 1.26
UCHL3-201ENST00000377595 RPGRIP1LQ68CZ1 1315 aa22.87■■□□□ 1.25
UCHL3-201ENST00000377595 SETBP1Q9Y6X0 1596 aa22.86■■□□□ 1.25
UCHL3-201ENST00000377595 MEX3CQ5U5Q3 659 aaKnown RBP22.86■■□□□ 1.25
UCHL3-201ENST00000377595 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
UCHL3-201ENST00000377595 PHLPP1O60346 1717 aa22.85■■□□□ 1.25
UCHL3-201ENST00000377595 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
UCHL3-201ENST00000377595 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
UCHL3-201ENST00000377595 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
UCHL3-201ENST00000377595 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
UCHL3-201ENST00000377595 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
UCHL3-201ENST00000377595 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
UCHL3-201ENST00000377595 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
UCHL3-201ENST00000377595 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
UCHL3-201ENST00000377595 MPHOSPH9Q99550 1183 aa22.81■■□□□ 1.24
UCHL3-201ENST00000377595 DCCP43146 1447 aa22.8■■□□□ 1.24
UCHL3-201ENST00000377595 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
UCHL3-201ENST00000377595 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
UCHL3-201ENST00000377595 MST1RQ04912 1400 aa22.77■■□□□ 1.24
UCHL3-201ENST00000377595 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
UCHL3-201ENST00000377595 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
UCHL3-201ENST00000377595 XRN1Q8IZH2 1706 aaKnown RBP22.75■■□□□ 1.23
UCHL3-201ENST00000377595 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
UCHL3-201ENST00000377595 ADGRL3Q9HAR2 1447 aa22.74■■□□□ 1.23
UCHL3-201ENST00000377595 KIF1BO60333 1816 aa22.74■■□□□ 1.23
UCHL3-201ENST00000377595 ROBO2Q9HCK4 1378 aa22.74■■□□□ 1.23
UCHL3-201ENST00000377595 ADGRF5Q8IZF2 1346 aa22.72■■□□□ 1.23
UCHL3-201ENST00000377595 LRP6O75581 1613 aa22.71■■□□□ 1.23
UCHL3-201ENST00000377595 ORAI2Q96SN7 254 aa22.71■■□□□ 1.23
UCHL3-201ENST00000377595 STK26Q9P289 416 aa22.71■■□□□ 1.23
UCHL3-201ENST00000377595 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
UCHL3-201ENST00000377595 ASXL1Q8IXJ9 1541 aa22.71■■□□□ 1.23
UCHL3-201ENST00000377595 SETD5Q9C0A6 1442 aa22.69■■□□□ 1.22
UCHL3-201ENST00000377595 C1orf167Q5SNV9 1468 aa22.67■■□□□ 1.22
UCHL3-201ENST00000377595 ACIN1Q9UKV3 1341 aaKnown RBP22.67■■□□□ 1.22
UCHL3-201ENST00000377595 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
UCHL3-201ENST00000377595 RXRBP28702 533 aa22.66■■□□□ 1.22
UCHL3-201ENST00000377595 TMEM132EQ6IEE7 984 aa22.66■■□□□ 1.22
UCHL3-201ENST00000377595 WAPLQ7Z5K2 1190 aa22.65■■□□□ 1.22
UCHL3-201ENST00000377595 ANKRD30BQ9BXX2 1392 aa22.64■■□□□ 1.22
UCHL3-201ENST00000377595 AFF2P51816 1311 aa22.64■■□□□ 1.22
UCHL3-201ENST00000377595 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
UCHL3-201ENST00000377595 ESCO1Q5FWF5 840 aa22.63■■□□□ 1.21
UCHL3-201ENST00000377595 SPATA31E1Q6ZUB1 1445 aa22.62■■□□□ 1.21
UCHL3-201ENST00000377595 ADAMTS2O95450 1211 aa22.61■■□□□ 1.21
UCHL3-201ENST00000377595 SHPRHQ149N8 1683 aa22.61■■□□□ 1.21
UCHL3-201ENST00000377595 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
UCHL3-201ENST00000377595 NGLY1Q96IV0 654 aa22.6■■□□□ 1.21
UCHL3-201ENST00000377595 QTRT2Q9H974 415 aaKnown RBP22.6■■□□□ 1.21
UCHL3-201ENST00000377595 SOS2Q07890 1332 aaPredicted RBP22.59■■□□□ 1.21
UCHL3-201ENST00000377595 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms