RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
SEC23B-204ENST00000377475 ITPRIPQ8IWB1 547 aa14.8□□□□□ -0.04
SEC23B-204ENST00000377475 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
SEC23B-204ENST00000377475 ARHGAP5Q13017 1502 aa14.8□□□□□ -0.04
SEC23B-204ENST00000377475 PRAG1Q86YV5 1406 aa14.8□□□□□ -0.04
SEC23B-204ENST00000377475 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 MTHFSP49914 203 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 E9PSI1 815 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 TPRNQ4KMQ1 711 aa14.79□□□□□ -0.04
SEC23B-204ENST00000377475 SRPK2P78362 688 aaKnown RBP14.78□□□□□ -0.04
SEC23B-204ENST00000377475 APBB1O00213 710 aa14.78□□□□□ -0.04
SEC23B-204ENST00000377475 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
SEC23B-204ENST00000377475 SLC24A1O60721 1099 aa14.77□□□□□ -0.04
SEC23B-204ENST00000377475 SMC4Q9NTJ3 1288 aa14.77□□□□□ -0.04
SEC23B-204ENST00000377475 KDM5CP41229 1560 aa14.77□□□□□ -0.05
SEC23B-204ENST00000377475 ADGRF5Q8IZF2 1346 aa14.77□□□□□ -0.05
SEC23B-204ENST00000377475 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.05
SEC23B-204ENST00000377475 FBLN1P23142 703 aa14.76□□□□□ -0.05
SEC23B-204ENST00000377475 RSPH4AQ5TD94 716 aa14.76□□□□□ -0.05
SEC23B-204ENST00000377475 GGNBP2Q9H3C7 697 aa14.76□□□□□ -0.05
SEC23B-204ENST00000377475 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
SEC23B-204ENST00000377475 SOX12O15370 315 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 WWC1Q8IX03 1113 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 CARD14Q9BXL6 1004 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 PDZRN3Q9UPQ7 1066 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 RLBP1P12271 317 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 CFAP53Q96M91 514 aa14.75□□□□□ -0.05
SEC23B-204ENST00000377475 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
SEC23B-204ENST00000377475 A2MP01023 1474 aa14.73□□□□□ -0.05
SEC23B-204ENST00000377475 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
SEC23B-204ENST00000377475 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
SEC23B-204ENST00000377475 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
SEC23B-204ENST00000377475 FAM135AQ9P2D6 1515 aa14.72□□□□□ -0.05
SEC23B-204ENST00000377475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.053e-7■■■□□ 16.4
SEC23B-204ENST00000377475 KDM2BQ8NHM5 1336 aa14.72□□□□□ -0.05
SEC23B-204ENST00000377475 SYNJ2O15056 1496 aa14.72□□□□□ -0.05
SEC23B-204ENST00000377475 PBRM1Q86U86 1689 aa14.72□□□□□ -0.05
SEC23B-204ENST00000377475 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.05
SEC23B-204ENST00000377475 UHRF1BP1Q6BDS2 1440 aa14.71□□□□□ -0.05
SEC23B-204ENST00000377475 MAPK8IP3Q9UPT6 1336 aa14.71□□□□□ -0.05
SEC23B-204ENST00000377475 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
SEC23B-204ENST00000377475 NAP1L5Q96NT1 182 aaPredicted RBP14.7□□□□□ -0.06
SEC23B-204ENST00000377475 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
SEC23B-204ENST00000377475 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
SEC23B-204ENST00000377475 CGNL1Q0VF96 1302 aa14.69□□□□□ -0.06
SEC23B-204ENST00000377475 WASHC2CQ9Y4E1 1318 aa14.69□□□□□ -0.06
SEC23B-204ENST00000377475 MINK1Q8N4C8 1332 aaPredicted RBP14.69□□□□□ -0.06
SEC23B-204ENST00000377475 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
SEC23B-204ENST00000377475 SYCP2Q9BX26 1530 aa14.68□□□□□ -0.06
SEC23B-204ENST00000377475 MAGI2Q86UL8 1455 aa14.68□□□□□ -0.06
SEC23B-204ENST00000377475 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
SEC23B-204ENST00000377475 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
SEC23B-204ENST00000377475 NUTM2FA1L443 756 aa14.67□□□□□ -0.06
SEC23B-204ENST00000377475 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
SEC23B-204ENST00000377475 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
SEC23B-204ENST00000377475 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
SEC23B-204ENST00000377475 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
SEC23B-204ENST00000377475 KANK1Q14678 1352 aa14.66□□□□□ -0.06
SEC23B-204ENST00000377475 HMOX1P09601 288 aa14.66□□□□□ -0.06
SEC23B-204ENST00000377475 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
SEC23B-204ENST00000377475 PMFBP1Q8TBY8 1022 aa14.65□□□□□ -0.06
SEC23B-204ENST00000377475 HSP90AB1P08238 724 aaKnown RBP14.64□□□□□ -0.07
SEC23B-204ENST00000377475 MLECQ14165 292 aa14.64□□□□□ -0.07
SEC23B-204ENST00000377475 COL17A1Q9UMD9 1497 aaPredicted RBP14.64□□□□□ -0.07
SEC23B-204ENST00000377475 DZIP1LQ8IYY4 767 aaKnown RBP14.64□□□□□ -0.07
SEC23B-204ENST00000377475 TBC1D2Q9BYX2 928 aa14.64□□□□□ -0.07
SEC23B-204ENST00000377475 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
SEC23B-204ENST00000377475 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
SEC23B-204ENST00000377475 EIF3AQ14152 1382 aaKnown RBP14.63□□□□□ -0.07
SEC23B-204ENST00000377475 FOXD4L5Q5VV16 416 aaPredicted RBP14.63□□□□□ -0.07
SEC23B-204ENST00000377475 FOXD4L4Q8WXT5 416 aaPredicted RBP14.63□□□□□ -0.07
SEC23B-204ENST00000377475 PANK2Q9BZ23 570 aa14.63□□□□□ -0.07
SEC23B-204ENST00000377475 MYH16Q9H6N6 1097 aa14.63□□□□□ -0.07
SEC23B-204ENST00000377475 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEC23B-204ENST00000377475 RIPK4P57078 832 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 NSD3Q9BZ95 1437 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 TRAPPC8Q9Y2L5 1435 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
SEC23B-204ENST00000377475 ARID3AQ99856 593 aa14.62□□□□□ -0.07
SEC23B-204ENST00000377475 NOB1Q9ULX3 412 aaKnown RBP14.62□□□□□ -0.07
SEC23B-204ENST00000377475 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
SEC23B-204ENST00000377475 PDE3AQ14432 1141 aa14.61□□□□□ -0.07
SEC23B-204ENST00000377475 GOLGA6L3A6NEY3 463 aa14.6□□□□□ -0.07
SEC23B-204ENST00000377475 BLMP54132 1417 aaPredicted RBP14.6□□□□□ -0.07
SEC23B-204ENST00000377475 SSH1Q8WYL5 1049 aa14.59□□□□□ -0.07
SEC23B-204ENST00000377475 ARHGEF12Q9NZN5 1544 aa14.58□□□□□ -0.07
SEC23B-204ENST00000377475 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
SEC23B-204ENST00000377475 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
SEC23B-204ENST00000377475 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
SEC23B-204ENST00000377475 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
SEC23B-204ENST00000377475 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
SEC23B-204ENST00000377475 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
SEC23B-204ENST00000377475 ZNF521Q96K83 1311 aa14.57□□□□□ -0.08
SEC23B-204ENST00000377475 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms