RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 FBXO31Q5XUX0 539 aaPredicted RBP17.85■□□□□ 0.45
TRIM40-206ENST00000376724 MYOM2P54296 1465 aa17.85■□□□□ 0.45
TRIM40-206ENST00000376724 IDI1Q13907 227 aa17.84■□□□□ 0.45
TRIM40-206ENST00000376724 IFT172Q9UG01 1749 aa17.83■□□□□ 0.45
TRIM40-206ENST00000376724 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
TRIM40-206ENST00000376724 TESK2Q96S53 571 aa17.82■□□□□ 0.44
TRIM40-206ENST00000376724 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
TRIM40-206ENST00000376724 PIK3C2BO00750 1634 aa17.81■□□□□ 0.44
TRIM40-206ENST00000376724 SLC52A1Q9NWF4 448 aa17.81■□□□□ 0.44
TRIM40-206ENST00000376724 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
TRIM40-206ENST00000376724 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
TRIM40-206ENST00000376724 CLTCQ00610 1675 aaKnown RBP17.8■□□□□ 0.44
TRIM40-206ENST00000376724 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
TRIM40-206ENST00000376724 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
TRIM40-206ENST00000376724 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
TRIM40-206ENST00000376724 TMF1P82094 1093 aa17.79■□□□□ 0.44
TRIM40-206ENST00000376724 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
TRIM40-206ENST00000376724 PPLO60437 1756 aa17.79■□□□□ 0.44
TRIM40-206ENST00000376724 IQGAP1P46940 1657 aa17.79■□□□□ 0.44
TRIM40-206ENST00000376724 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
TRIM40-206ENST00000376724 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
TRIM40-206ENST00000376724 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
TRIM40-206ENST00000376724 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
TRIM40-206ENST00000376724 VGFO15240 615 aaPredicted RBP17.75■□□□□ 0.43
TRIM40-206ENST00000376724 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
TRIM40-206ENST00000376724 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
TRIM40-206ENST00000376724 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
TRIM40-206ENST00000376724 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
TRIM40-206ENST00000376724 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
TRIM40-206ENST00000376724 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
TRIM40-206ENST00000376724 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
TRIM40-206ENST00000376724 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
TRIM40-206ENST00000376724 TMEM131LA2VDJ0 1609 aa17.71■□□□□ 0.43
TRIM40-206ENST00000376724 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
TRIM40-206ENST00000376724 MRS2Q9HD23 443 aa17.71■□□□□ 0.42
TRIM40-206ENST00000376724 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.42
TRIM40-206ENST00000376724 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.42
TRIM40-206ENST00000376724 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
TRIM40-206ENST00000376724 SETBP1Q9Y6X0 1596 aa17.68■□□□□ 0.42
TRIM40-206ENST00000376724 PANK3Q9H999 370 aa17.67■□□□□ 0.42
TRIM40-206ENST00000376724 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
TRIM40-206ENST00000376724 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
TRIM40-206ENST00000376724 ADGRB1O14514 1584 aa17.65■□□□□ 0.42
TRIM40-206ENST00000376724 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
TRIM40-206ENST00000376724 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
TRIM40-206ENST00000376724 ZFYVE9O95405 1425 aa17.64■□□□□ 0.41
TRIM40-206ENST00000376724 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
TRIM40-206ENST00000376724 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM40-206ENST00000376724 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
TRIM40-206ENST00000376724 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
TRIM40-206ENST00000376724 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
TRIM40-206ENST00000376724 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
TRIM40-206ENST00000376724 STK26Q9P289 416 aa17.61■□□□□ 0.41
TRIM40-206ENST00000376724 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
TRIM40-206ENST00000376724 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
TRIM40-206ENST00000376724 RALBP1Q15311 655 aa17.6■□□□□ 0.41
TRIM40-206ENST00000376724 MYO3AQ8NEV4 1616 aa17.59■□□□□ 0.41
TRIM40-206ENST00000376724 TNRQ92752 1358 aa17.59■□□□□ 0.41
TRIM40-206ENST00000376724 KDM5AP29375 1690 aaKnown RBP17.58■□□□□ 0.41
TRIM40-206ENST00000376724 RIMS2Q9UQ26 1411 aa17.58■□□□□ 0.41
TRIM40-206ENST00000376724 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
TRIM40-206ENST00000376724 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
TRIM40-206ENST00000376724 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
TRIM40-206ENST00000376724 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
TRIM40-206ENST00000376724 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
TRIM40-206ENST00000376724 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
TRIM40-206ENST00000376724 ASXL1Q8IXJ9 1541 aa17.55■□□□□ 0.4
TRIM40-206ENST00000376724 PARD3Q8TEW0 1356 aa17.54■□□□□ 0.4
TRIM40-206ENST00000376724 MYOM1P52179 1685 aa17.54■□□□□ 0.4
TRIM40-206ENST00000376724 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
TRIM40-206ENST00000376724 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
TRIM40-206ENST00000376724 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.39
TRIM40-206ENST00000376724 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
TRIM40-206ENST00000376724 BCANQ96GW7 911 aa17.5■□□□□ 0.39
TRIM40-206ENST00000376724 POGKQ9P215 609 aa17.5■□□□□ 0.39
TRIM40-206ENST00000376724 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
TRIM40-206ENST00000376724 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
TRIM40-206ENST00000376724 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
TRIM40-206ENST00000376724 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
TRIM40-206ENST00000376724 FER1L4A9Z1Z3 1794 aa17.49■□□□□ 0.39
TRIM40-206ENST00000376724 HDGFP51858 240 aaKnown RBP17.49■□□□□ 0.39
TRIM40-206ENST00000376724 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
TRIM40-206ENST00000376724 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
TRIM40-206ENST00000376724 C3P01024 1663 aa17.48■□□□□ 0.39
TRIM40-206ENST00000376724 SLC12A5Q9H2X9 1139 aa17.48■□□□□ 0.39
TRIM40-206ENST00000376724 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
TRIM40-206ENST00000376724 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
TRIM40-206ENST00000376724 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
TRIM40-206ENST00000376724 UBR1Q8IWV7 1749 aa17.47■□□□□ 0.39
TRIM40-206ENST00000376724 PTPRMP28827 1452 aa17.47■□□□□ 0.39
TRIM40-206ENST00000376724 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
TRIM40-206ENST00000376724 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.38
TRIM40-206ENST00000376724 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
TRIM40-206ENST00000376724 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
TRIM40-206ENST00000376724 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
TRIM40-206ENST00000376724 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
TRIM40-206ENST00000376724 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
TRIM40-206ENST00000376724 METP08581 1390 aa17.42■□□□□ 0.38
TRIM40-206ENST00000376724 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
TRIM40-206ENST00000376724 LTKP29376 864 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms